| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
Click here to switch to the map view.
The map label for this gene is cbh [H]
Identifier: 158421835
GI number: 158421835
Start: 251571
End: 252689
Strand: Reverse
Name: cbh [H]
Synonym: AZC_0211
Alternate gene names: 158421835
Gene position: 252689-251571 (Counterclockwise)
Preceding gene: 158421845
Following gene: 158421831
Centisome position: 4.71
GC content: 66.04
Gene sequence:
>1119_bases TTGCGGACGCGGAGGAACCCCATGTTGCGCACCCTCACCACCGCCCTCTCCCTCGCCGCCATGATGAATGCGGCGCTGGC CTGCACGGCCGTCGATATCGTCGCCGCCGACAGGACCGTCATCGCCGGACGCACCATGGAATGGGCGTTCGATATGAAAT GGACGCTGGTGAGCCGCCCCAAGGGCTTTCCGGTGAAGCTCACCGCGCCCAAGGCCCTCAATCTGCCGGAGCGCACGGTG GAGGCGAAATATGCGCTGGTGGGTGTCAGCGCCAACATCATACCCGGCGGGGCGCTGGTGGAGGGGCAGAATGCCGCCGG CCTCGGCATGAGCGGCAATTTCCTGCCCGGCTTCACCACCTATCAGACCGTGACCCCGCAGGATAAGAATTATGTGGAGG TGCTCTCCTTCGGCGCCTGGGCGCTCGGCAATTTCGCCACCATTGCCGAGGTGAAGGAGGCGCTGAAGACCACCAAGGTC TGGTCCGATCCCTCCGCCGCCAGCGGCCCCACCGCGCCGCTGATGCACTTCGTGTTCACGGACCGCGCGGGCGCCAGCAT CATCGTGGAATATGTGGAGGGGGAACTGCACATCCACGACAACGTGGCCCATGTGCTGACCAACGCCCCCACCTATGACT GGCACCTCACCAACCTGCGCAATTATCTCAACCTCTCCACCGTGGGCGTGGAGCAGCGGCAGATCGGCAACGTGGACGTG ACGGCGCTCGGCCAGGGCGGCGGCCTCGTGGGCCTGCCGGGCGATTATACGCCGCCCTCGCGCTTCGTGCGCGCCAGCGC CCTGCGCCACGGCATGACCCCGCCCAAGGATGGCGCCGAAGCCGTGCAGGCGGTGGTGCATGTGCTGAACACGGTGGACA TTCCGGTGGGCGTCGCCCAGTCGCGCCTGCCGAACGGGCAGCTTGTATCCGATTACACCCAGTGGGTGTCCATCAAGGAT CTCACCAACAACCGGCTCCAGATCGCCGATTATGCCCACCGCACCAGCTATCTCACCATCGACCTCGCGCCCCTCTTCGC GCTGGACAAGCCGGCCGAGCGGCTCATCACCGATCTGCCCTATCCGGCGGGCGTCGGGGCCGATGTGCTGAAGCCGTGA
Upstream 100 bases:
>100_bases CCTCAGCTCTGGTTCACATCTGTTCACTCAGAAATGCTCCCACAACCCATCGGTGGCACTATAATCCCGCCGTCCGCCTA GACCGGGAGCCACCCGGCCG
Downstream 100 bases:
>100_bases GCGTGGAGGTCAGCCGCGCTTGAGGCGGCGGGCGGCGGCCATGAGGGTCGCGCGGTGGGTGCCGTGCCGGCGCACGAGAC CCATCGCTTCCTCCCGCGAG
Product: choloylglycine hydrolase family protein precursor
Products: NA
Alternate protein names: Bile salt hydrolase; Conjugated bile acid hydrolase; CBAH [H]
Number of amino acids: Translated: 372; Mature: 372
Protein sequence:
>372_residues MRTRRNPMLRTLTTALSLAAMMNAALACTAVDIVAADRTVIAGRTMEWAFDMKWTLVSRPKGFPVKLTAPKALNLPERTV EAKYALVGVSANIIPGGALVEGQNAAGLGMSGNFLPGFTTYQTVTPQDKNYVEVLSFGAWALGNFATIAEVKEALKTTKV WSDPSAASGPTAPLMHFVFTDRAGASIIVEYVEGELHIHDNVAHVLTNAPTYDWHLTNLRNYLNLSTVGVEQRQIGNVDV TALGQGGGLVGLPGDYTPPSRFVRASALRHGMTPPKDGAEAVQAVVHVLNTVDIPVGVAQSRLPNGQLVSDYTQWVSIKD LTNNRLQIADYAHRTSYLTIDLAPLFALDKPAERLITDLPYPAGVGADVLKP
Sequences:
>Translated_372_residues MRTRRNPMLRTLTTALSLAAMMNAALACTAVDIVAADRTVIAGRTMEWAFDMKWTLVSRPKGFPVKLTAPKALNLPERTV EAKYALVGVSANIIPGGALVEGQNAAGLGMSGNFLPGFTTYQTVTPQDKNYVEVLSFGAWALGNFATIAEVKEALKTTKV WSDPSAASGPTAPLMHFVFTDRAGASIIVEYVEGELHIHDNVAHVLTNAPTYDWHLTNLRNYLNLSTVGVEQRQIGNVDV TALGQGGGLVGLPGDYTPPSRFVRASALRHGMTPPKDGAEAVQAVVHVLNTVDIPVGVAQSRLPNGQLVSDYTQWVSIKD LTNNRLQIADYAHRTSYLTIDLAPLFALDKPAERLITDLPYPAGVGADVLKP >Mature_372_residues MRTRRNPMLRTLTTALSLAAMMNAALACTAVDIVAADRTVIAGRTMEWAFDMKWTLVSRPKGFPVKLTAPKALNLPERTV EAKYALVGVSANIIPGGALVEGQNAAGLGMSGNFLPGFTTYQTVTPQDKNYVEVLSFGAWALGNFATIAEVKEALKTTKV WSDPSAASGPTAPLMHFVFTDRAGASIIVEYVEGELHIHDNVAHVLTNAPTYDWHLTNLRNYLNLSTVGVEQRQIGNVDV TALGQGGGLVGLPGDYTPPSRFVRASALRHGMTPPKDGAEAVQAVVHVLNTVDIPVGVAQSRLPNGQLVSDYTQWVSIKD LTNNRLQIADYAHRTSYLTIDLAPLFALDKPAERLITDLPYPAGVGADVLKP
Specific function: The enzyme catalyzes the degradation of conjugated bile acids in the mammalian gut [H]
COG id: COG3049
COG function: function code M; Penicillin V acylase and related amidases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase C59 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003199 [H]
Pfam domain/function: PF02275 CBAH [H]
EC number: =3.5.1.24 [H]
Molecular weight: Translated: 39968; Mature: 39968
Theoretical pI: Translated: 7.29; Mature: 7.29
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MRTRRNPMLRTLTTALSLAAMMNAALACTAVDIVAADRTVIAGRTMEWAFDMKWTLVSRP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCEEEEEEEEEEEEECC KGFPVKLTAPKALNLPERTVEAKYALVGVSANIIPGGALVEGQNAAGLGMSGNFLPGFTT CCCEEEEECCCCCCCCHHHHHCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCE YQTVTPQDKNYVEVLSFGAWALGNFATIAEVKEALKTTKVWSDPSAASGPTAPLMHFVFT EEEECCCCCCHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEE DRAGASIIVEYVEGELHIHDNVAHVLTNAPTYDWHLTNLRNYLNLSTVGVEQRQIGNVDV CCCCCEEEEEEECCEEEEECCHHHHHHCCCCCEEEHHHHHHHHCCEEECCCHHHCCCEEE TALGQGGGLVGLPGDYTPPSRFVRASALRHGMTPPKDGAEAVQAVVHVLNTVDIPVGVAQ EEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH SRLPNGQLVSDYTQWVSIKDLTNNRLQIADYAHRTSYLTIDLAPLFALDKPAERLITDLP HCCCCCCCHHHHHHEEEEEECCCCEEEEEEHHCCCEEEEEEEHHHHHCCCCHHHHHHCCC YPAGVGADVLKP CCCCCCCHHCCC >Mature Secondary Structure MRTRRNPMLRTLTTALSLAAMMNAALACTAVDIVAADRTVIAGRTMEWAFDMKWTLVSRP CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHEEEEECCCEEEECCCEEEEEEEEEEEEECC KGFPVKLTAPKALNLPERTVEAKYALVGVSANIIPGGALVEGQNAAGLGMSGNFLPGFTT CCCEEEEECCCCCCCCHHHHHCEEEEEEEECCCCCCCEEEECCCCCCCCCCCCCCCCCCE YQTVTPQDKNYVEVLSFGAWALGNFATIAEVKEALKTTKVWSDPSAASGPTAPLMHFVFT EEEECCCCCCHHHHHHHCCHHHCCHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHEEEE DRAGASIIVEYVEGELHIHDNVAHVLTNAPTYDWHLTNLRNYLNLSTVGVEQRQIGNVDV CCCCCEEEEEEECCEEEEECCHHHHHHCCCCCEEEHHHHHHHHCCEEECCCHHHCCCEEE TALGQGGGLVGLPGDYTPPSRFVRASALRHGMTPPKDGAEAVQAVVHVLNTVDIPVGVAQ EEECCCCCEEECCCCCCCHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHH SRLPNGQLVSDYTQWVSIKDLTNNRLQIADYAHRTSYLTIDLAPLFALDKPAERLITDLP HCCCCCCCHHHHHHEEEEEECCCCEEEEEEHHCCCEEEEEEEHHHHHCCCCHHHHHHCCC YPAGVGADVLKP CCCCCCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7618863; 11792842 [H]