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The map label for this gene is ycdL [C]

Identifier: 158421833

GI number: 158421833

Start: 250467

End: 251234

Strand: Direct

Name: ycdL [C]

Synonym: AZC_0209

Alternate gene names: 158421833

Gene position: 250467-251234 (Clockwise)

Preceding gene: 158421832

Following gene: 158421834

Centisome position: 4.66

GC content: 66.41

Gene sequence:

>768_bases
GTGCGCCTCACACGGCGAGCGCGTTTCGATCCGCCACTTCAAGGAACGTCCATGGACCCCACCTTCACCGGCCCCTATGC
CGACACGGCGACACCCGTCCTGCCCCGGACGGAGATGACCCTCGACCTTGCGCGCACGGCGCTGGTGGTGATCGATCCGC
AGATCGATGTGATGAGCCCCAAGGGCCTCGCATGGCCGGCGGTGGGTGAGAGCGTCACCGAAACCAACATCGTGGCGAAC
CTCGTCACGCTGTTCCGCGCCGCCAAGGCAGCGGGCATCACCGTCGCCGTCTCGCCGCACTATTACTACTGCTGGGACCA
CCATTGGCGCTGGCAGTCGCCGCTGGAGAAGTTCCAGCACGACGTGGGCGCCTTCGACCGCAAGGGGCCGTACACGCTGG
ACGGCTTCCGCGCCTCCGGGGCGGACTTCATGGAGGAGTTCAAGCCCTATATCGAGGACGGCAAGACCATCATCTGCGCG
CCGCACAAGCTCTATGGCCCGCAGACCAACGACCTCAAGCTCCAGCTTGGCAAGCAGGGCATCCGGCAGGTGATCGTCGC
CGGCATGCTGGCCAACATGTGCGTGGAATCCCACATGCGCGACCTGCTGGAAGCGGGCTACGAGGTGGCCGTCGTGCGCG
ATGCCGTGGCGGCCCCGAAGCTGCCGGACGGGGACGGCTATCTCGCCGCGCTCATCAACTACCGTTTCATGGCCAATGGC
CTCTGGACCACGCAGGAGACGGTGGCGCGGCTCACGCCTGCGGGCTGA

Upstream 100 bases:

>100_bases
CCGGCCGTCCGCTGCCCACACTGCCACCGGCTCGGAGGGTCTCCCCCGGGTCCGCGGGAGCCGGCAGCGGCGGCGGGCGG
CGCCTTGAAGGGCGGGCCGC

Downstream 100 bases:

>100_bases
ACGCGAAACCGGCCGGGCGCCCCCGCGCGCCCGGCACCGCCTACCTCCACTACGCAAGTCTGGCGGAACCTTCCTCTGAT
ACCCGAGTTGCTGGCGCAGG

Product: isochorismatase family protein

Products: NA

Alternate protein names: Isochorismatase Family Protein; Isochorismatase; Amidase Related Nicotinamidase; Amidase; Amidohydrolase; Amidase Related Nicotinamidases; Isochorismatase Protein

Number of amino acids: Translated: 255; Mature: 255

Protein sequence:

>255_residues
MRLTRRARFDPPLQGTSMDPTFTGPYADTATPVLPRTEMTLDLARTALVVIDPQIDVMSPKGLAWPAVGESVTETNIVAN
LVTLFRAAKAAGITVAVSPHYYYCWDHHWRWQSPLEKFQHDVGAFDRKGPYTLDGFRASGADFMEEFKPYIEDGKTIICA
PHKLYGPQTNDLKLQLGKQGIRQVIVAGMLANMCVESHMRDLLEAGYEVAVVRDAVAAPKLPDGDGYLAALINYRFMANG
LWTTQETVARLTPAG

Sequences:

>Translated_255_residues
MRLTRRARFDPPLQGTSMDPTFTGPYADTATPVLPRTEMTLDLARTALVVIDPQIDVMSPKGLAWPAVGESVTETNIVAN
LVTLFRAAKAAGITVAVSPHYYYCWDHHWRWQSPLEKFQHDVGAFDRKGPYTLDGFRASGADFMEEFKPYIEDGKTIICA
PHKLYGPQTNDLKLQLGKQGIRQVIVAGMLANMCVESHMRDLLEAGYEVAVVRDAVAAPKLPDGDGYLAALINYRFMANG
LWTTQETVARLTPAG
>Mature_255_residues
MRLTRRARFDPPLQGTSMDPTFTGPYADTATPVLPRTEMTLDLARTALVVIDPQIDVMSPKGLAWPAVGESVTETNIVAN
LVTLFRAAKAAGITVAVSPHYYYCWDHHWRWQSPLEKFQHDVGAFDRKGPYTLDGFRASGADFMEEFKPYIEDGKTIICA
PHKLYGPQTNDLKLQLGKQGIRQVIVAGMLANMCVESHMRDLLEAGYEVAVVRDAVAAPKLPDGDGYLAALINYRFMANG
LWTTQETVARLTPAG

Specific function: Unknown

COG id: COG1335

COG function: function code Q; Amidases related to nicotinamidase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28201; Mature: 28201

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: PS00501 SPASE_I_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRLTRRARFDPPLQGTSMDPTFTGPYADTATPVLPRTEMTLDLARTALVVIDPQIDVMSP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCEEEECC
KGLAWPAVGESVTETNIVANLVTLFRAAKAAGITVAVSPHYYYCWDHHWRWQSPLEKFQH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCHHHHHHHHH
DVGAFDRKGPYTLDGFRASGADFMEEFKPYIEDGKTIICAPHKLYGPQTNDLKLQLGKQG
HHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCEEEEHHHHH
IRQVIVAGMLANMCVESHMRDLLEAGYEVAVVRDAVAAPKLPDGDGYLAALINYRFMANG
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHCC
LWTTQETVARLTPAG
CCCHHHHHHHCCCCC
>Mature Secondary Structure
MRLTRRARFDPPLQGTSMDPTFTGPYADTATPVLPRTEMTLDLARTALVVIDPQIDVMSP
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHEEEEEECCCEEEECC
KGLAWPAVGESVTETNIVANLVTLFRAAKAAGITVAVSPHYYYCWDHHWRWQSPLEKFQH
CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCEEEEECCCEEEEECCCCCCHHHHHHHHH
DVGAFDRKGPYTLDGFRASGADFMEEFKPYIEDGKTIICAPHKLYGPQTNDLKLQLGKQG
HHCCCCCCCCCEECCCCCCCHHHHHHHHHHHHCCCEEEECCHHHCCCCCCCEEEEHHHHH
IRQVIVAGMLANMCVESHMRDLLEAGYEVAVVRDAVAAPKLPDGDGYLAALINYRFMANG
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEEHHHHHCCCCCCCCCHHHHHHHHHHHHCC
LWTTQETVARLTPAG
CCCHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA