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The map label for this gene is ykvN [H]

Identifier: 158421829

GI number: 158421829

Start: 247502

End: 247981

Strand: Reverse

Name: ykvN [H]

Synonym: AZC_0205

Alternate gene names: 158421829

Gene position: 247981-247502 (Counterclockwise)

Preceding gene: 158421831

Following gene: 158421820

Centisome position: 4.62

GC content: 64.79

Gene sequence:

>480_bases
TTGGCTGGGAACGCACAAATTGACAAGTATGCACCTTTTGGTAAGTACCCGTGCATGACGACAGACAGGCCAGAGACGGA
CGAGCCGCAGGTCGGCACCTGCACGCCCACGCTGCCGGGCTTCACCTGCGGCCTCGATGCGACGCTTCGGGTAATCGCGG
GCAAGTGGAAGCCGCTGATCCTCTATTTCCTCGCCCAAGGTGGGCCCACCCGCTATGGCGAGCTGCGCCGGGCGGTGCGG
GATGTCAGCGACAAGATGCTGATCCAGCAGCTCAAGGAGCTGGAGGCCGACCAGCTTGTGAAGCGCACCGATTACAAGGA
AGTCCCGCCGCGCGTCGACTATGCCCTGACACCGCTGGGCCAGAGCCTGGCGCAGGCTCTCGTGCCCCTGTGCCAGTGGG
GCACGGAGAATATGGAAGACGTAACGCGGGTCTATGCGGAGCGCGCCAGCTGGGGCGCGAGGACGAGCCGGGCGACCTGA

Upstream 100 bases:

>100_bases
GCGCGGCGCCCAGTCCGATGCCGCTCCCGCCGCCGGTCACTACGGCGGTCTTACCCTTAAGCCTGTCCATGACGTGCTCC
TTCAATGAGGTGGCTCTCAG

Downstream 100 bases:

>100_bases
GGCGTCTCAGGCAAACCGCGGGTTCAGGTTCTGCGCGTCCGGCGGTCAATGGCCGGGGCGACCATGCCGGGAATGTAGGC
GTCCGAGATGAAGGACCGGC

Product: transcriptional regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 159; Mature: 158

Protein sequence:

>159_residues
MAGNAQIDKYAPFGKYPCMTTDRPETDEPQVGTCTPTLPGFTCGLDATLRVIAGKWKPLILYFLAQGGPTRYGELRRAVR
DVSDKMLIQQLKELEADQLVKRTDYKEVPPRVDYALTPLGQSLAQALVPLCQWGTENMEDVTRVYAERASWGARTSRAT

Sequences:

>Translated_159_residues
MAGNAQIDKYAPFGKYPCMTTDRPETDEPQVGTCTPTLPGFTCGLDATLRVIAGKWKPLILYFLAQGGPTRYGELRRAVR
DVSDKMLIQQLKELEADQLVKRTDYKEVPPRVDYALTPLGQSLAQALVPLCQWGTENMEDVTRVYAERASWGARTSRAT
>Mature_158_residues
AGNAQIDKYAPFGKYPCMTTDRPETDEPQVGTCTPTLPGFTCGLDATLRVIAGKWKPLILYFLAQGGPTRYGELRRAVRD
VSDKMLIQQLKELEADQLVKRTDYKEVPPRVDYALTPLGQSLAQALVPLCQWGTENMEDVTRVYAERASWGARTSRAT

Specific function: Unknown

COG id: COG1733

COG function: function code K; Predicted transcriptional regulators

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 HTH hxlR-type DNA-binding domain [H]

Homologues:

Organism=Escherichia coli, GI87082391, Length=108, Percent_Identity=38.8888888888889, Blast_Score=79, Evalue=2e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002577
- InterPro:   IPR011991 [H]

Pfam domain/function: PF01638 DUF24 [H]

EC number: NA

Molecular weight: Translated: 17727; Mature: 17596

Theoretical pI: Translated: 7.89; Mature: 7.89

Prosite motif: PS51118 HTH_HXLR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAGNAQIDKYAPFGKYPCMTTDRPETDEPQVGTCTPTLPGFTCGLDATLRVIAGKWKPLI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCHHH
LYFLAQGGPTRYGELRRAVRDVSDKMLIQQLKELEADQLVKRTDYKEVPPRVDYALTPLG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCHHH
QSLAQALVPLCQWGTENMEDVTRVYAERASWGARTSRAT
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AGNAQIDKYAPFGKYPCMTTDRPETDEPQVGTCTPTLPGFTCGLDATLRVIAGKWKPLI
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCHHHHHHHHHCCCCHHH
LYFLAQGGPTRYGELRRAVRDVSDKMLIQQLKELEADQLVKRTDYKEVPPRVDYALTPLG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHCHHH
QSLAQALVPLCQWGTENMEDVTRVYAERASWGARTSRAT
HHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]