| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is braE [H]
Identifier: 158421822
GI number: 158421822
Start: 241433
End: 242611
Strand: Direct
Name: braE [H]
Synonym: AZC_0198
Alternate gene names: 158421822
Gene position: 241433-242611 (Clockwise)
Preceding gene: 158421821
Following gene: 158421823
Centisome position: 4.5
GC content: 66.07
Gene sequence:
>1179_bases GTGATGACGGACAGCCTCGCCATGCGACGCTCCGCCTCCGCCCGCGTGGGCGACGCACTCACCGTCGTCGCGGTGGAACT GGTCGGCGCGCTCTATCTGCGCCAGTTCCTGCTCACCGATGACTGGCGCCTCGTCATCGCCCTGCTGGCGGCCTTCGCGG GCGCGCTCGTGCTGATGGAGCGGCAGCCGGCGCTGGAGGCGCGGATCGAAGGGGCGTTCGCGGCCCAGTCGCGCCTCGCC ATGCTGCTCGGCATCGCCATCGTGCTAGCCTTCCCGTTCGCGCTGGAAGGCAACACCTATGCGCTGCATCTGTGCGTCAT CTCCATGCTCTATGCCGTGCTGGCGCTCGCGCTCAATTTCCAGCTCGGCAGCGCCAATATCCCGAACTTCGCCACCGGCG CGTCCTATGGCATCGGAGCCTATGCCTCGGCCCTGCTGGCGCTGAATTTCGGCGTCAGCTTCTGGCTGGCGCTGCCGGCC GCCGCCATTGTAGCCACCGTGTTCGGCTTCCTGCTCGGCATCCCGTCCATGCGCACCCGCGACAGCTATCTGGCGCTGGT GACCATCGCGTTCGGGGTCGTGGTCAACCAGCTTCTCAACAATCTGGATTTCACCGGCGGCCCGAACGGCCTCGTGGGCA TTCCGGTGCCCGAGCTGTTCGGCCACTCCTTCGCCTCGCCGCTCGTGATCCTCGGCGCCGAGCTGCCGCCGCAGGCGAAT TTCTACTACCTCTCCGCGCTGCTGGTCCTGGTCTCCATCCTGTTCGCCGAGCGGCTGCACGATTCCCGCGTAGGCCTTGC CTGGAATGCGCTGCGGGCGGATGAGCTCGCCGCCCGCTGCCAGGGCATCAACGTCACCTGGTACAAGGTGCTGGCCTTCG CGGTGGATGCCTTCCTCGCCGGCTTTGCAGGCACGATCTACGCCTTCTATGTGGGCTTCATCTCGCCGGACAACTTCACC TTCCTCGTCTCGGTGACGATCATGACCATGGTGATCGCAGGCGGCATGGACAACATCCTCGGCGTGATCGTCGGCGCCTT CCTGCTCACGCTGCTGCCGGAAAAGCTGCGTGCCTTCTCGGACTACCGCATCCTGTTCTTCGGCGTCACCGTCATCGCCT TCCTCATGATCCGCCCCCAGGGGCTCTTTCCCCAGCGCCTGCGGCGCTACGGAGACTGA
Upstream 100 bases:
>100_bases ACGGGGCGTCCTACCGCCTCGTCTTCGTCTTCCTGCTTGTCATCGCCGTGCTGGTGTTCCGGCCGTCCGGCCTCATGGGC CGCACCCTCGTGGAGAAAGT
Downstream 100 bases:
>100_bases CCGATGGGCTTCGACGCTTCTTCTCCCGTCGTTCTCGAGGGCGAGAACCTCACCATGCGCTTCGGCGGCATCGTCGCCAT GGCGCAGGTGGAGTTCAGCC
Product: branched chain amino acid ABC transporter
Products: ADP; phosphate; L-valine [Cytoplasm]; ADP; L-iso-leucine [Cytoplasm]; L-leucine [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 392; Mature: 392
Protein sequence:
>392_residues MMTDSLAMRRSASARVGDALTVVAVELVGALYLRQFLLTDDWRLVIALLAAFAGALVLMERQPALEARIEGAFAAQSRLA MLLGIAIVLAFPFALEGNTYALHLCVISMLYAVLALALNFQLGSANIPNFATGASYGIGAYASALLALNFGVSFWLALPA AAIVATVFGFLLGIPSMRTRDSYLALVTIAFGVVVNQLLNNLDFTGGPNGLVGIPVPELFGHSFASPLVILGAELPPQAN FYYLSALLVLVSILFAERLHDSRVGLAWNALRADELAARCQGINVTWYKVLAFAVDAFLAGFAGTIYAFYVGFISPDNFT FLVSVTIMTMVIAGGMDNILGVIVGAFLLTLLPEKLRAFSDYRILFFGVTVIAFLMIRPQGLFPQRLRRYGD
Sequences:
>Translated_392_residues MMTDSLAMRRSASARVGDALTVVAVELVGALYLRQFLLTDDWRLVIALLAAFAGALVLMERQPALEARIEGAFAAQSRLA MLLGIAIVLAFPFALEGNTYALHLCVISMLYAVLALALNFQLGSANIPNFATGASYGIGAYASALLALNFGVSFWLALPA AAIVATVFGFLLGIPSMRTRDSYLALVTIAFGVVVNQLLNNLDFTGGPNGLVGIPVPELFGHSFASPLVILGAELPPQAN FYYLSALLVLVSILFAERLHDSRVGLAWNALRADELAARCQGINVTWYKVLAFAVDAFLAGFAGTIYAFYVGFISPDNFT FLVSVTIMTMVIAGGMDNILGVIVGAFLLTLLPEKLRAFSDYRILFFGVTVIAFLMIRPQGLFPQRLRRYGD >Mature_392_residues MMTDSLAMRRSASARVGDALTVVAVELVGALYLRQFLLTDDWRLVIALLAAFAGALVLMERQPALEARIEGAFAAQSRLA MLLGIAIVLAFPFALEGNTYALHLCVISMLYAVLALALNFQLGSANIPNFATGASYGIGAYASALLALNFGVSFWLALPA AAIVATVFGFLLGIPSMRTRDSYLALVTIAFGVVVNQLLNNLDFTGGPNGLVGIPVPELFGHSFASPLVILGAELPPQAN FYYLSALLVLVSILFAERLHDSRVGLAWNALRADELAARCQGINVTWYKVLAFAVDAFLAGFAGTIYAFYVGFISPDNFT FLVSVTIMTMVIAGGMDNILGVIVGAFLLTLLPEKLRAFSDYRILFFGVTVIAFLMIRPQGLFPQRLRRYGD
Specific function: Component of the high affinity leucine, isoleucine, valine, transport system (LIV-I), which is operative without Na(+) and is specific for alanine and threonine, in addition to branched-chain amino acids [H]
COG id: COG4177
COG function: function code E; ABC-type branched-chain amino acid transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the binding-protein-dependent transport system permease family. LivHM subfamily [H]
Homologues:
Organism=Escherichia coli, GI1789865, Length=307, Percent_Identity=38.1107491856677, Blast_Score=186, Evalue=3e-48,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001851 - InterPro: IPR021807 [H]
Pfam domain/function: PF02653 BPD_transp_2; PF11862 DUF3382 [H]
EC number: NA
Molecular weight: Translated: 42171; Mature: 42171
Theoretical pI: Translated: 6.78; Mature: 6.78
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MMTDSLAMRRSASARVGDALTVVAVELVGALYLRQFLLTDDWRLVIALLAAFAGALVLME CCCCHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC RQPALEARIEGAFAAQSRLAMLLGIAIVLAFPFALEGNTYALHLCVISMLYAVLALALNF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHC QLGSANIPNFATGASYGIGAYASALLALNFGVSFWLALPAAAIVATVFGFLLGIPSMRTR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DSYLALVTIAFGVVVNQLLNNLDFTGGPNGLVGIPVPELFGHSFASPLVILGAELPPQAN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHCCHHCCCCEEEECCCCCCCC FYYLSALLVLVSILFAERLHDSRVGLAWNALRADELAARCQGINVTWYKVLAFAVDAFLA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GFAGTIYAFYVGFISPDNFTFLVSVTIMTMVIAGGMDNILGVIVGAFLLTLLPEKLRAFS HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC DYRILFFGVTVIAFLMIRPQGLFPQRLRRYGD CCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC >Mature Secondary Structure MMTDSLAMRRSASARVGDALTVVAVELVGALYLRQFLLTDDWRLVIALLAAFAGALVLME CCCCHHHHHHCCCCHHCHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHC RQPALEARIEGAFAAQSRLAMLLGIAIVLAFPFALEGNTYALHLCVISMLYAVLALALNF CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEECCCCHHHHHHHHHHHHHHHHHHHHC QLGSANIPNFATGASYGIGAYASALLALNFGVSFWLALPAAAIVATVFGFLLGIPSMRTR CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCC DSYLALVTIAFGVVVNQLLNNLDFTGGPNGLVGIPVPELFGHSFASPLVILGAELPPQAN HHHHHHHHHHHHHHHHHHHHHCCCCCCCCCEEECCCHHHHCCHHCCCCEEEECCCCCCCC FYYLSALLVLVSILFAERLHDSRVGLAWNALRADELAARCQGINVTWYKVLAFAVDAFLA HHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH GFAGTIYAFYVGFISPDNFTFLVSVTIMTMVIAGGMDNILGVIVGAFLLTLLPEKLRAFS HHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHC DYRILFFGVTVIAFLMIRPQGLFPQRLRRYGD CCHHHHHHHHHHHHHHHCCCCCCHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; L-valine [Periplasm]; H2O; ATP; L-iso-leucine [Periplasm]; L-leucine [Periplasm] [C]
Specific reaction: ATP + L-valine [Periplasm] + H2O = ADP + phosphate + L-valine [Cytoplasm] ATP + L-iso-leucine [Periplasm] + H2O = ADP + phosphate + L-iso-leucine [Cytoplasm] ATP + L-leucine [Periplasm] + H2O = ADP + phosphate + L-leucine [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 2120183; 10984043 [H]