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The map label for this gene is nagD [C]

Identifier: 158421723

GI number: 158421723

Start: 116518

End: 117564

Strand: Reverse

Name: nagD [C]

Synonym: AZC_0099

Alternate gene names: 158421723

Gene position: 117564-116518 (Counterclockwise)

Preceding gene: 158421725

Following gene: 158421722

Centisome position: 2.19

GC content: 70.11

Gene sequence:

>1047_bases
ATGCACCCGCCGCGCCTGACGTGTCTCCCAGCGCAAGGCGGATGTGCGCGGCTGGGCCTTGTGAAGCCGGGCGCGGCGTG
GCACCTCACCGGCGCGCCGGGGCGGTCGTTGCGCCGCGGCACGGGCAGCCCCCTGCCCCCGCGCCGAGGAGATGGGTTCA
TGAATGACGTCGCGCCGCCCCGGAGTGCCCTGCCGCTCCTGTCCGGCTTTTCCGAGATCGCCGGCAACTACGATCTCATC
CTGTGCGACGTCTGGGGCGTGATCCACAACGGCGTCTCCGCCTTCCCCGCCGCGTGCCACGCGCTGGAGCAGGTGCGCGC
GACGGGGGCGAGCGTCTTCCTCGTGTCCAATGCGCCGCGCCCCAACGCGTTCGTCATGGCCATGCTGGATGGCATGGGCG
TGCCACGCACCTCCTATGACGGCATCGTCACCTCCGGGGACGTCACGCGCAGCGTACTGGCCGATCGGCCCGGCGCCCGC
ATGTTCCACCTCGGCCCGGCCCGCGATCTCGGCACCTATGAGGGGCTCGACCTTGTCCACACGCCGCTCGGCGAGGCGGA
GCTGGTGGTCTGCACCGGCCTCCTCAATGACGATGTGGAGACGCCGGACGACTACCGGCCCATGCTGGAGCAGATGCGCG
CCCGCGACCTCGCCTTCGTGTGCGCCAATCCCGACATCGTCGTGGAGCGGGGCGACCGGCTCATCTATTGCGCCGGCGCT
ATCGCGCAGCTCTATGACGAACTGGGCGGCAGCAGCCTCTATTGCGGCAAGCCCCACCCGCCCATCTATGCGGAAGCCCT
CAAGCGGACCCTGACCGTGCGCGACAGCGTGCCCGTTCCCTCCCGCATCCTTGCCATCGGCGATGCCCTGCGCACGGACG
TGACGGGCGCAGCAGGCGCCGGCTTCGACAGCCTGTTCATCTCCAGTGGCATCCACGCCATCGAGCTGCGTTCGGAACAT
GGCGCGCCGCCGGACATGGAGCTGGTGGAGCAGCTCTTCGCCGCCGGACCGAGGCCCAATGCCGTGATGCCCCGGCTCTC
CTGGTAG

Upstream 100 bases:

>100_bases
GACCCATCACTGTTCGTCTCCCTTACAAATCCGCGGGGATGCTATCCCCCGGCGGGGAGATGAAAAGGGTCGGAGCCGAT
GGGGCCAGAAAAGAAGCGGC

Downstream 100 bases:

>100_bases
TTGCGCACCCCCGGCTCCGGATCGCCGCCCGCGCTTGACGGGGGCAGCCCCGTGGGCCAAGGGTGACATCCCTTCCCCGA
GCCGGCCGGTTGCCGATGCC

Product: HAD-superfamily hydrolase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 348; Mature: 348

Protein sequence:

>348_residues
MHPPRLTCLPAQGGCARLGLVKPGAAWHLTGAPGRSLRRGTGSPLPPRRGDGFMNDVAPPRSALPLLSGFSEIAGNYDLI
LCDVWGVIHNGVSAFPAACHALEQVRATGASVFLVSNAPRPNAFVMAMLDGMGVPRTSYDGIVTSGDVTRSVLADRPGAR
MFHLGPARDLGTYEGLDLVHTPLGEAELVVCTGLLNDDVETPDDYRPMLEQMRARDLAFVCANPDIVVERGDRLIYCAGA
IAQLYDELGGSSLYCGKPHPPIYAEALKRTLTVRDSVPVPSRILAIGDALRTDVTGAAGAGFDSLFISSGIHAIELRSEH
GAPPDMELVEQLFAAGPRPNAVMPRLSW

Sequences:

>Translated_348_residues
MHPPRLTCLPAQGGCARLGLVKPGAAWHLTGAPGRSLRRGTGSPLPPRRGDGFMNDVAPPRSALPLLSGFSEIAGNYDLI
LCDVWGVIHNGVSAFPAACHALEQVRATGASVFLVSNAPRPNAFVMAMLDGMGVPRTSYDGIVTSGDVTRSVLADRPGAR
MFHLGPARDLGTYEGLDLVHTPLGEAELVVCTGLLNDDVETPDDYRPMLEQMRARDLAFVCANPDIVVERGDRLIYCAGA
IAQLYDELGGSSLYCGKPHPPIYAEALKRTLTVRDSVPVPSRILAIGDALRTDVTGAAGAGFDSLFISSGIHAIELRSEH
GAPPDMELVEQLFAAGPRPNAVMPRLSW
>Mature_348_residues
MHPPRLTCLPAQGGCARLGLVKPGAAWHLTGAPGRSLRRGTGSPLPPRRGDGFMNDVAPPRSALPLLSGFSEIAGNYDLI
LCDVWGVIHNGVSAFPAACHALEQVRATGASVFLVSNAPRPNAFVMAMLDGMGVPRTSYDGIVTSGDVTRSVLADRPGAR
MFHLGPARDLGTYEGLDLVHTPLGEAELVVCTGLLNDDVETPDDYRPMLEQMRARDLAFVCANPDIVVERGDRLIYCAGA
IAQLYDELGGSSLYCGKPHPPIYAEALKRTLTVRDSVPVPSRILAIGDALRTDVTGAAGAGFDSLFISSGIHAIELRSEH
GAPPDMELVEQLFAAGPRPNAVMPRLSW

Specific function: Unknown

COG id: COG0647

COG function: function code G; Predicted sugar phosphatases of the HAD superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 nudix hydrolase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR005834
- InterPro:   IPR023214
- InterPro:   IPR006357
- InterPro:   IPR023215
- InterPro:   IPR020476
- InterPro:   IPR020084
- InterPro:   IPR000086
- InterPro:   IPR015797 [H]

Pfam domain/function: PF00702 Hydrolase; PF00293 NUDIX [H]

EC number: NA

Molecular weight: Translated: 36949; Mature: 36949

Theoretical pI: Translated: 6.03; Mature: 6.03

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.3 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
2.3 %Cys     (Mature Protein)
2.9 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHPPRLTCLPAQGGCARLGLVKPGAAWHLTGAPGRSLRRGTGSPLPPRRGDGFMNDVAPP
CCCCCEEEEECCCCCEEEEEECCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCHHCCCCC
RSALPLLSGFSEIAGNYDLILCDVWGVIHNGVSAFPAACHALEQVRATGASVFLVSNAPR
HHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
PNAFVMAMLDGMGVPRTSYDGIVTSGDVTRSVLADRPGARMFHLGPARDLGTYEGLDLVH
CCEEEEEEECCCCCCCCCCCCEEECCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHEE
TPLGEAELVVCTGLLNDDVETPDDYRPMLEQMRARDLAFVCANPDIVVERGDRLIYCAGA
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCEEEECCCEEEEEHHH
IAQLYDELGGSSLYCGKPHPPIYAEALKRTLTVRDSVPVPSRILAIGDALRTDVTGAAGA
HHHHHHHHCCCEEECCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCCC
GFDSLFISSGIHAIELRSEHGAPPDMELVEQLFAAGPRPNAVMPRLSW
CHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure
MHPPRLTCLPAQGGCARLGLVKPGAAWHLTGAPGRSLRRGTGSPLPPRRGDGFMNDVAPP
CCCCCEEEEECCCCCEEEEEECCCCEEEECCCCCCHHHCCCCCCCCCCCCCCCHHCCCCC
RSALPLLSGFSEIAGNYDLILCDVWGVIHNGVSAFPAACHALEQVRATGASVFLVSNAPR
HHHHHHHHHHHHHCCCCCEEEEEHHHHHHCCHHHHHHHHHHHHHHHHCCCEEEEEECCCC
PNAFVMAMLDGMGVPRTSYDGIVTSGDVTRSVLADRPGARMFHLGPARDLGTYEGLDLVH
CCEEEEEEECCCCCCCCCCCCEEECCHHHHHHHHCCCCCEEEECCCCCCCCCCCCCHHEE
TPLGEAELVVCTGLLNDDVETPDDYRPMLEQMRARDLAFVCANPDIVVERGDRLIYCAGA
CCCCCCEEEEEEECCCCCCCCCHHHHHHHHHHHHCCEEEEECCCCEEEECCCEEEEEHHH
IAQLYDELGGSSLYCGKPHPPIYAEALKRTLTVRDSVPVPSRILAIGDALRTDVTGAAGA
HHHHHHHHCCCEEECCCCCCCHHHHHHHHHEECCCCCCCCHHHHHHHHHHHHCCCCCCCC
GFDSLFISSGIHAIELRSEHGAPPDMELVEQLFAAGPRPNAVMPRLSW
CHHHHHHHCCCEEEEEECCCCCCCCHHHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8631946 [H]