| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158421719
Identifier: 158421719
GI number: 158421719
Start: 110372
End: 111445
Strand: Reverse
Name: 158421719
Synonym: AZC_0095
Alternate gene names: NA
Gene position: 111445-110372 (Counterclockwise)
Preceding gene: 158421720
Following gene: 158421718
Centisome position: 2.08
GC content: 69.65
Gene sequence:
>1074_bases GTGACCGCCGCCGGGGTGCCAGAGAAAGAGACGTATAAGCGGGGATATGCGCGAGAGCGTGATTCGCGCTGCTGCCGGAA GTGGATGATGCCCCGCCTGTTTCCTCTCCTCGCGTTCCTGACGGTCACGGCAGCGGCACCCGCGGCCCTGGCGCAGGGCG TGCTGCTGCCCCCCGGAGAGGTACCCAATGCCAGCGGCGGCGTGTCGGGCGCCGATCTGTTCTCGCCCCAGCCCATCGCG CCGCAGATGACTCCGCGGCAGCTGACGCCGCCGCAGCCGACGGCCCCGCAACAGATCCCGCCTTCCGCAGCGCCGCGGCC GGCGACCGCCCAGCCGGCACCGAGCGCGGCGCCCCCTGCCCCCGCCGCTCAGGCCGCCCCCGCGACACCGCCGGCGTCCG CGCCACTGCCGCAGCAGCGCCCGGCCTCGGCCAACCAGCCACGCCCGCCCGCCGCAGCGCAGGCTCCGGCCGCAGCTCCC ACCTCGCCCCGCGTGGCGCCCCCCGCGCAGGCCCAGCAGGCGCTGCCGCAGGCCGGACAGCAGGGCCAGATCGAGCGCGC CAGCCCGGCGACCATCGAGAAGCTGACCACCTACTGGAATTCGGTGCAGACGCTGGTCGGCACCTTCGTGCAGGTGGATG CGGACGGCACCCGCAAGACCGGCGACTTCTACATGCAGAAGCCCGGCCGGGTGCGGTTCGAGTACAATCCGCCGACCCAG ATCCAGCTCATCTCCAACGGCCAGAACGTCGCGGTGCGCGACAGGCGCCTGAACACGCAGGACCTTACGCCGCTGAATCA GACGCCGCTGCGCTTCATCCTCGCCGAGCGCATCGATCTCACGCGCAACTCCAACGTGCTGGGCGTCTATCAGGACAATC TCTACATCCAGGTCATCATGCAGGAGAGCGTGCCGATGATGGGCACCTACCGCCTGCAGATCCTGTTCGATGCCAAGGAC TTCCAACTGCGGCAGTGGACTGTGACCGATCCGCAGGGTTACGACACCTCGGTCGCCATCTACGATCTCAACTACACCCA GCGGCCGGACCCGAGCCTGTTCGTCATCAACTGA
Upstream 100 bases:
>100_bases TGCCACCGCCGGAACCGGCTGCCCGGCCGATGAAAAGCGGGGTGCGGATGCGGGTCCGGCAGGTTAATGAGAACGAGACT GCTTCGCCCCGGGACGGCCT
Downstream 100 bases:
>100_bases CGGATGCTCCGGCTGCGGCCTGAGGTCTGAGGAACAAGCCATGGCCTTCAGGGGCAGTTGCCAGTGCGGAACCGTGCGCT ACGAGGTGGCGCGGCTGCAT
Product: outer membrane lipoprotein-sorting protein
Products: NA
Alternate protein names: Outer Membrane Lipoprotein Carrier Protein; Twin-Arginine Translocation Pathway Signal; Outer-Membrane Lipoprotein Carrier Protein; Outer Membrane Lipoprotein-Sorting Protein; Outer Membrane Lipoproteins Carrier Protein; Outer-Membrane Lipoproteins Carrier Protein; Signal Peptide; LolA Family Protein; Outer Membrane Lipoprotein Carrier Protein Lola; LolA Family Outer Membrane Lipoprotein Carrier Protein; LolA Type Protein; Outer Membrane Lipoprotein Carrier Protein LolA Family
Number of amino acids: Translated: 357; Mature: 356
Protein sequence:
>357_residues MTAAGVPEKETYKRGYARERDSRCCRKWMMPRLFPLLAFLTVTAAAPAALAQGVLLPPGEVPNASGGVSGADLFSPQPIA PQMTPRQLTPPQPTAPQQIPPSAAPRPATAQPAPSAAPPAPAAQAAPATPPASAPLPQQRPASANQPRPPAAAQAPAAAP TSPRVAPPAQAQQALPQAGQQGQIERASPATIEKLTTYWNSVQTLVGTFVQVDADGTRKTGDFYMQKPGRVRFEYNPPTQ IQLISNGQNVAVRDRRLNTQDLTPLNQTPLRFILAERIDLTRNSNVLGVYQDNLYIQVIMQESVPMMGTYRLQILFDAKD FQLRQWTVTDPQGYDTSVAIYDLNYTQRPDPSLFVIN
Sequences:
>Translated_357_residues MTAAGVPEKETYKRGYARERDSRCCRKWMMPRLFPLLAFLTVTAAAPAALAQGVLLPPGEVPNASGGVSGADLFSPQPIA PQMTPRQLTPPQPTAPQQIPPSAAPRPATAQPAPSAAPPAPAAQAAPATPPASAPLPQQRPASANQPRPPAAAQAPAAAP TSPRVAPPAQAQQALPQAGQQGQIERASPATIEKLTTYWNSVQTLVGTFVQVDADGTRKTGDFYMQKPGRVRFEYNPPTQ IQLISNGQNVAVRDRRLNTQDLTPLNQTPLRFILAERIDLTRNSNVLGVYQDNLYIQVIMQESVPMMGTYRLQILFDAKD FQLRQWTVTDPQGYDTSVAIYDLNYTQRPDPSLFVIN >Mature_356_residues TAAGVPEKETYKRGYARERDSRCCRKWMMPRLFPLLAFLTVTAAAPAALAQGVLLPPGEVPNASGGVSGADLFSPQPIAP QMTPRQLTPPQPTAPQQIPPSAAPRPATAQPAPSAAPPAPAAQAAPATPPASAPLPQQRPASANQPRPPAAAQAPAAAPT SPRVAPPAQAQQALPQAGQQGQIERASPATIEKLTTYWNSVQTLVGTFVQVDADGTRKTGDFYMQKPGRVRFEYNPPTQI QLISNGQNVAVRDRRLNTQDLTPLNQTPLRFILAERIDLTRNSNVLGVYQDNLYIQVIMQESVPMMGTYRLQILFDAKDF QLRQWTVTDPQGYDTSVAIYDLNYTQRPDPSLFVIN
Specific function: Unknown
COG id: COG2834
COG function: function code M; Outer membrane lipoprotein-sorting protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 38644; Mature: 38513
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTAAGVPEKETYKRGYARERDSRCCRKWMMPRLFPLLAFLTVTAAAPAALAQGVLLPPGE CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VPNASGGVSGADLFSPQPIAPQMTPRQLTPPQPTAPQQIPPSAAPRPATAQPAPSAAPPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAAQAAPATPPASAPLPQQRPASANQPRPPAAAQAPAAAPTSPRVAPPAQAQQALPQAGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC QGQIERASPATIEKLTTYWNSVQTLVGTFVQVDADGTRKTGDFYMQKPGRVRFEYNPPTQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEECCCCCEEEEECCCCE IQLISNGQNVAVRDRRLNTQDLTPLNQTPLRFILAERIDLTRNSNVLGVYQDNLYIQVIM EEEEECCCEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEE QESVPMMGTYRLQILFDAKDFQLRQWTVTDPQGYDTSVAIYDLNYTQRPDPSLFVIN ECCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEC >Mature Secondary Structure TAAGVPEKETYKRGYARERDSRCCRKWMMPRLFPLLAFLTVTAAAPAALAQGVLLPPGE CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC VPNASGGVSGADLFSPQPIAPQMTPRQLTPPQPTAPQQIPPSAAPRPATAQPAPSAAPPA CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PAAQAAPATPPASAPLPQQRPASANQPRPPAAAQAPAAAPTSPRVAPPAQAQQALPQAGQ CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHCCCC QGQIERASPATIEKLTTYWNSVQTLVGTFVQVDADGTRKTGDFYMQKPGRVRFEYNPPTQ CCCCCCCCCHHHHHHHHHHHHHHHHHHHEEEECCCCCCCCCCEEECCCCCEEEEECCCCE IQLISNGQNVAVRDRRLNTQDLTPLNQTPLRFILAERIDLTRNSNVLGVYQDNLYIQVIM EEEEECCCEEEEECCCCCHHCCCCCCCCHHHHHHHHHHHHCCCCCEEEEEECCEEEEEEE QESVPMMGTYRLQILFDAKDFQLRQWTVTDPQGYDTSVAIYDLNYTQRPDPSLFVIN ECCCCCEEEEEEEEEECCCCCEEEEEEECCCCCCCCEEEEEECCCCCCCCCCEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA