| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is thiE [H]
Identifier: 158421703
GI number: 158421703
Start: 96908
End: 97624
Strand: Reverse
Name: thiE [H]
Synonym: AZC_0079
Alternate gene names: 158421703
Gene position: 97624-96908 (Counterclockwise)
Preceding gene: 158421704
Following gene: 158421702
Centisome position: 1.82
GC content: 69.74
Gene sequence:
>717_bases TTGGCCCGCCATCGCGTTTCGTGGCGGACGGCCAAGGTTTATCTCGCCTTTCACTTCGCCTCAGGCCGAGGACGTGTCAT GCCCCATCCGTTCGACCTCTCCCTCTATCTCGTGACCGACCGCCGGCTGACGGCCGAGCGGGGCCTTCTCGAGACGGTCG AGGAAGCGGTGGCGGGTGGCGTCACGCTCGTGCAGTTGCGCGATCCGGAGGCGAAGGGCCGGGCGCTGGCGGAAGAAGCC CGCGCCCTCATCGGCCTGCTGCGGCCGAAGGGCATTCCCCTCATCATCAACGACCGGGTGGATGTGGCCGCCGCCGTGGG CGCCGAGGGCGTGCATCTGGGGCAGGACGACCTTGATCCCGCCGCCGCACGCGCCATCCTCGGGCCGGACGCCATCATCG GCCTCTCGGTGGGTTCGCTGGAGGAGCTGTCCGCCTCGAACCTCGGCCCGGTGGACTATGTGGGCTGCGGCCCCATCAAC GCCACCGGCACCAAGGGCGATGCGGGCGGGGCCATCGGCATCGAGGGCTTCGCCTTCCTGCGCTCCCACATCGCGTTGCC CATGGTCGGCATCGGCGGGCTGAAGGCGGAGGATGCCGAAGCGGTGATGCAGGCGGGCGCGAACGGCATCGCTGTCGTTT CCGCTCTGTGCGCCGCCCCGGACGTGACCGAGGCCGCCCGCACTCTCAAGACCATCATTGAGACGTCCCGCCGCTGA
Upstream 100 bases:
>100_bases GCGACTGGCGGTCCGGTCCCGGCGGCGGTGGCTGCGGCGGGCCTTTCCGCGGCCGCGTGAATAATCCCGGCCGGATTATT GCCGGTACGGCAAAAGTCTC
Downstream 100 bases:
>100_bases GCGGCAAGTTCTGTTCCTTTCTGCGTTCCAACGACAGTCCCTCAAGGAGACCGACATCATGTCGACCCCCGCCCTTCCCT CAGGCGTCGCCATCACCGGG
Product: thiamine-phosphate pyrophosphorylase
Products: NA
Alternate protein names: TMP pyrophosphorylase; TMP-PPase; Thiamine-phosphate synthase [H]
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MARHRVSWRTAKVYLAFHFASGRGRVMPHPFDLSLYLVTDRRLTAERGLLETVEEAVAGGVTLVQLRDPEAKGRALAEEA RALIGLLRPKGIPLIINDRVDVAAAVGAEGVHLGQDDLDPAAARAILGPDAIIGLSVGSLEELSASNLGPVDYVGCGPIN ATGTKGDAGGAIGIEGFAFLRSHIALPMVGIGGLKAEDAEAVMQAGANGIAVVSALCAAPDVTEAARTLKTIIETSRR
Sequences:
>Translated_238_residues MARHRVSWRTAKVYLAFHFASGRGRVMPHPFDLSLYLVTDRRLTAERGLLETVEEAVAGGVTLVQLRDPEAKGRALAEEA RALIGLLRPKGIPLIINDRVDVAAAVGAEGVHLGQDDLDPAAARAILGPDAIIGLSVGSLEELSASNLGPVDYVGCGPIN ATGTKGDAGGAIGIEGFAFLRSHIALPMVGIGGLKAEDAEAVMQAGANGIAVVSALCAAPDVTEAARTLKTIIETSRR >Mature_237_residues ARHRVSWRTAKVYLAFHFASGRGRVMPHPFDLSLYLVTDRRLTAERGLLETVEEAVAGGVTLVQLRDPEAKGRALAEEAR ALIGLLRPKGIPLIINDRVDVAAAVGAEGVHLGQDDLDPAAARAILGPDAIIGLSVGSLEELSASNLGPVDYVGCGPINA TGTKGDAGGAIGIEGFAFLRSHIALPMVGIGGLKAEDAEAVMQAGANGIAVVSALCAAPDVTEAARTLKTIIETSRR
Specific function: Condenses 4-methyl-5-(beta-hydroxyethyl)thiazole monophosphate (THZ-P) and 2-methyl-4-amino-5-hydroxymethyl pyrimidine pyrophosphate (HMP-PP) to form thiamine monophosphate (TMP) [H]
COG id: COG0352
COG function: function code H; Thiamine monophosphate synthase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the TMP-PPase family [H]
Homologues:
Organism=Escherichia coli, GI1790426, Length=195, Percent_Identity=31.7948717948718, Blast_Score=71, Evalue=7e-14, Organism=Saccharomyces cerevisiae, GI6325042, Length=231, Percent_Identity=36.3636363636364, Blast_Score=122, Evalue=4e-29,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013785 - InterPro: IPR022998 - InterPro: IPR003733 [H]
Pfam domain/function: PF02581 TMP-TENI [H]
EC number: =2.5.1.3 [H]
Molecular weight: Translated: 24673; Mature: 24541
Theoretical pI: Translated: 6.03; Mature: 6.03
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARHRVSWRTAKVYLAFHFASGRGRVMPHPFDLSLYLVTDRRLTAERGLLETVEEAVAGG CCCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCC VTLVQLRDPEAKGRALAEEARALIGLLRPKGIPLIINDRVDVAAAVGAEGVHLGQDDLDP EEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCEECCCCCCCH AAARAILGPDAIIGLSVGSLEELSASNLGPVDYVGCGPINATGTKGDAGGAIGIEGFAFL HHHHHHCCCCEEEEECCCCHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHH RSHIALPMVGIGGLKAEDAEAVMQAGANGIAVVSALCAAPDVTEAARTLKTIIETSRR HHHHCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC >Mature Secondary Structure ARHRVSWRTAKVYLAFHFASGRGRVMPHPFDLSLYLVTDRRLTAERGLLETVEEAVAGG CCCCCCEEEEEEEEEEEEECCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHHHHCC VTLVQLRDPEAKGRALAEEARALIGLLRPKGIPLIINDRVDVAAAVGAEGVHLGQDDLDP EEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCEEEECCCCEEECCCCCCEECCCCCCCH AAARAILGPDAIIGLSVGSLEELSASNLGPVDYVGCGPINATGTKGDAGGAIGIEGFAFL HHHHHHCCCCEEEEECCCCHHHHHCCCCCCCCEECCCCCCCCCCCCCCCCCCCHHHHHHH RSHIALPMVGIGGLKAEDAEAVMQAGANGIAVVSALCAAPDVTEAARTLKTIIETSRR HHHHCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA