| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158421695
Identifier: 158421695
GI number: 158421695
Start: 87538
End: 88518
Strand: Reverse
Name: 158421695
Synonym: AZC_0071
Alternate gene names: NA
Gene position: 88518-87538 (Counterclockwise)
Preceding gene: 158421696
Following gene: 158421694
Centisome position: 1.65
GC content: 69.11
Gene sequence:
>981_bases ATGACGCTGGACGGGATGACCATCATGGTCCCCGTCCACACCGCCCCGGCCGCCCAGAGCCCCTATGAGATCGCGCGGGG CTCGAACGGCGCCACGCGCATCCTGCGCGACGGCCTGCCGCTGGCGGAAGTCTCCTTTCCGCTGCGCCCGCGCTTCTATG ACCGCGTGACCGCCGACGGCGTGCCCTACTGGAAGATCGCCACGCTCCACGGCCGCGACGTGCTCGCGACCACCGTATTG CAGGAGTGCGTGCGCTACCAGAGCCGCGCCAAGACCTGCCAGTTCTGTGCCATCGGCCAGTCGCTGGAGGCCGGCCGCAC CATCGCCCGCAAGACACCGGAGCAGCTCGCCGAGGTGGCGAAGGCGGCCGTCGAGCTTGATGCCGTCACCCATATGGTGA TGACCACCGGCACACCGCCCGGCAAGGATCGCGGCTGCTCCGTCCTCATGGAGAGCACTGCCGCCGTGAAGGCCGCCGTG GACCTCGCCATTCAGGTGCAGTGCGAGCCGCCGGACGACGACATCTGGTTCAAACGCATGCACGAGGCCGGCGCGGATTC CCTCGGGATGCATCTGGAGGCAGTGACGCCGGAGGTGCGCGCCCGCATCATGCCCGGCAAGGCGCAGGTGCCCATCGCAC GCTATCTCTCCGCCTTCGAGGCCGCTGTGCCGGTGTTCGGCAAGGGGCAGGTCTCCACCTATATCCTCGCCGGGCTCGGC GACACGCGCGAAGCCATCCTTGCCATGTGCGAGGAACTGCTGAAGCGCGGCGTCTATCCCTTCGTGGTGCCCTTCGTGCC CATCTCCGGCACGCCGCTCGAAGGCCATCCCGGCCCGCAGCCCGCCTTCATGAAATCCGTGCTCCAGCCGCTGGCGGCAA TGGTGCGTGCGGCGGGCCTTCGGGCCACCGACATCAAGGCCGGCTGCGGCAAGTGCGGCGCCTGCTCGGCCCTCTCCACG TATGAGCGGGGGATCGCCTGA
Upstream 100 bases:
>100_bases GATGACCGAGTTGCAGTCCTTCGGGGTCCGGCTCGCTGATCCGGACGGCGCGGGCGCGCAGAGCCGCCGGGGCGGCGCCG GCCCCTCCGACCACAAGGCC
Downstream 100 bases:
>100_bases TGTTCGATCCCTTCAAGCCCTTCACCGCTTCCGAATTCCAGGTGAAGTTCGCCACGGAGCACTGGGAGCGGGACGGCGCC GCCAACCTGCGCCGCCGCGT
Product: biotin synthase-related enzyme
Products: NA
Alternate protein names: Radical SAM Domain-Containing Protein; Elongator /MiaB/NifB; Biotin Synthase-Related; Lipoic Acid Synthetase; Oxidoreductase; Iron-Molybdenum Cofactorbiosynthesis Nitrogenase NifB; Radical SAM Family Protein
Number of amino acids: Translated: 326; Mature: 325
Protein sequence:
>326_residues MTLDGMTIMVPVHTAPAAQSPYEIARGSNGATRILRDGLPLAEVSFPLRPRFYDRVTADGVPYWKIATLHGRDVLATTVL QECVRYQSRAKTCQFCAIGQSLEAGRTIARKTPEQLAEVAKAAVELDAVTHMVMTTGTPPGKDRGCSVLMESTAAVKAAV DLAIQVQCEPPDDDIWFKRMHEAGADSLGMHLEAVTPEVRARIMPGKAQVPIARYLSAFEAAVPVFGKGQVSTYILAGLG DTREAILAMCEELLKRGVYPFVVPFVPISGTPLEGHPGPQPAFMKSVLQPLAAMVRAAGLRATDIKAGCGKCGACSALST YERGIA
Sequences:
>Translated_326_residues MTLDGMTIMVPVHTAPAAQSPYEIARGSNGATRILRDGLPLAEVSFPLRPRFYDRVTADGVPYWKIATLHGRDVLATTVL QECVRYQSRAKTCQFCAIGQSLEAGRTIARKTPEQLAEVAKAAVELDAVTHMVMTTGTPPGKDRGCSVLMESTAAVKAAV DLAIQVQCEPPDDDIWFKRMHEAGADSLGMHLEAVTPEVRARIMPGKAQVPIARYLSAFEAAVPVFGKGQVSTYILAGLG DTREAILAMCEELLKRGVYPFVVPFVPISGTPLEGHPGPQPAFMKSVLQPLAAMVRAAGLRATDIKAGCGKCGACSALST YERGIA >Mature_325_residues TLDGMTIMVPVHTAPAAQSPYEIARGSNGATRILRDGLPLAEVSFPLRPRFYDRVTADGVPYWKIATLHGRDVLATTVLQ ECVRYQSRAKTCQFCAIGQSLEAGRTIARKTPEQLAEVAKAAVELDAVTHMVMTTGTPPGKDRGCSVLMESTAAVKAAVD LAIQVQCEPPDDDIWFKRMHEAGADSLGMHLEAVTPEVRARIMPGKAQVPIARYLSAFEAAVPVFGKGQVSTYILAGLGD TREAILAMCEELLKRGVYPFVVPFVPISGTPLEGHPGPQPAFMKSVLQPLAAMVRAAGLRATDIKAGCGKCGACSALSTY ERGIA
Specific function: Unknown
COG id: COG2516
COG function: function code R; Biotin synthase-related enzyme
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 34808; Mature: 34677
Theoretical pI: Translated: 7.95; Mature: 7.95
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 3.7 %Met (Translated Protein) 6.4 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 3.4 %Met (Mature Protein) 6.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLDGMTIMVPVHTAPAAQSPYEIARGSNGATRILRDGLPLAEVSFPLRPRFYDRVTADG CCCCCEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHCCCCHHHCCCCCCCCHHHHHCCCC VPYWKIATLHGRDVLATTVLQECVRYQSRAKTCQFCAIGQSLEAGRTIARKTPEQLAEVA CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHCHHHHHCCHHHHHHHH KAAVELDAVTHMVMTTGTPPGKDRGCSVLMESTAAVKAAVDLAIQVQCEPPDDDIWFKRM HHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHH HEAGADSLGMHLEAVTPEVRARIMPGKAQVPIARYLSAFEAAVPVFGKGQVSTYILAGLG HHCCCHHHCCEEECCCHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCC DTREAILAMCEELLKRGVYPFVVPFVPISGTPLEGHPGPQPAFMKSVLQPLAAMVRAAGL CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RATDIKAGCGKCGACSALSTYERGIA CEECCCCCCCCCCCHHHHHHHHHCCC >Mature Secondary Structure TLDGMTIMVPVHTAPAAQSPYEIARGSNGATRILRDGLPLAEVSFPLRPRFYDRVTADG CCCCEEEEEEEECCCCCCCCHHHHCCCCCHHHHHHCCCCHHHCCCCCCCCHHHHHCCCC VPYWKIATLHGRDVLATTVLQECVRYQSRAKTCQFCAIGQSLEAGRTIARKTPEQLAEVA CCCEEEEEECCCHHHHHHHHHHHHHHHHHCCHHHHHHCCCCHHHCHHHHHCCHHHHHHHH KAAVELDAVTHMVMTTGTPPGKDRGCSVLMESTAAVKAAVDLAIQVQCEPPDDDIWFKRM HHHHHHHHHHHHHEECCCCCCCCCCHHHHHHHHHHHHHEEEEEEEEEECCCCCHHHHHHH HEAGADSLGMHLEAVTPEVRARIMPGKAQVPIARYLSAFEAAVPVFGKGQVSTYILAGLG HHCCCHHHCCEEECCCHHHHHEECCCCCCCCHHHHHHHHHHHCCCCCCCCEEEEEEECCC DTREAILAMCEELLKRGVYPFVVPFVPISGTPLEGHPGPQPAFMKSVLQPLAAMVRAAGL CHHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCC RATDIKAGCGKCGACSALSTYERGIA CEECCCCCCCCCCCHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA