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The map label for this gene is xanB [H]

Identifier: 158421681

GI number: 158421681

Start: 70625

End: 72052

Strand: Reverse

Name: xanB [H]

Synonym: AZC_0057

Alternate gene names: 158421681

Gene position: 72052-70625 (Counterclockwise)

Preceding gene: 158421682

Following gene: 158421680

Centisome position: 1.34

GC content: 65.83

Gene sequence:

>1428_bases
TTGATGGTGTCGCGACACAAAATCGTGCCTGTGATCCTTGCGGGAGGAACCGGCACCAGACTGTGGCCACTGTCGCGCCA
GAGCTTACCCAAGCAGTTCATCGCGCTCGTCTCGGAAAATACGCTCTATCAGGACACCCTGTTGCGTGTCGCCGAGAGCG
ACGTGTTCCTGCCCCCCGTCGTCATCACCGGGACCGACTTCCGCTTCTTCGCCAAGCGGCAGGCTGCCGAGATCGAAATC
CATCCGACCGTCCTGCTGGAGCCCGTGCGCCGGGACAGCGGCCCCGCGCTCCTCGCGGCCGCCGCTTATGTGCGCGACCA
GCACGGCCCCGAGACACTGGTGCTGGCCCTCGCCGCCGACCACGTGGTGTCCAATCCAGACGCCTTCCGCGCCTGCGTGA
ACAGCGCGGCCGAAGCCGCATCCAAGGGCCATATCGTCACGTTCGGCATCCGTCCGCAGGGCCCCAGCACCGCCTATGGC
TACATCAAGCCCGGCACCGTGGTGGAGGGCACCGATGCGGCGCTCGTGGACCGCTTCGTGGAAAAGCCGGACGCCGAGAC
CGCGGCCCGCTATGTGGCCGATGGCTATCTCTGGAACTCCGGCAACTTCCTCTTCCCCGCCGGCCTGATGCTGGAGGAAG
GGGCGCGGCTCGAGCCCGAAATGACCGCGCACGCGGAGGCCGCCATCGCCAAGGCGAAGCCGGACCTCACCTTTCTCAAC
CTCGACAGCGCGGAATTCTCCGCTTCCAAGGCCATCTCCATCGATTTCGCGGTGCTGGAACACACGCAGGCCGCGGCGGT
GGTGGCCGGCGACTTCGGCTGGTCCGACATCGGCGCCTGGGACGCGGTCCATGACGTGAATGCGCAGGACGCGCATGGCA
ACGTGACCCACGGCTCCGTCTCGCTGATGGATAGCCGCAATTCCTACGTCTATACGGACGGCAAGCTGGTGGCCGGCATC
GGCCTCGACGGCATTTCGGTGGTGGCCACCGACGACGCCATCCTGGTGATGCCTTCCGAGCGCAGCCAGGACGTGAAGAA
GCTGGTGAGCGAGCTCAGCTCCGCCAAGCGGAACGAGGTGAACGAGCACCTCAAGATGCACCGGCCCTGGGGCACCTACC
AGACCATCTGCCGCGGCGACCGCTTCCACGTGAAGAAGATCGTGGTCGAGCCGGGCGGCAAGCTCTCGCTCCAGAAGCAC
TATCACCGCGCCGAGCACTGGGTGGTGGTGCGCGGCACCGCCGAGGTGACCGTGGACGACAAGGTGTTCACGGTGAACGA
AAACGAATCCACCTATCTGCCCTGCGGCAGCGTGCACCGTCTGGCCAACCCAGGCCGCATCCCGCTGGAACTCATCGAGG
TCCAGACGGGCTCGTACCTCGGCGAGGACGATATTGTGCGGCTGGAGGACGTCTACAGCCGCCAGTGA

Upstream 100 bases:

>100_bases
CGCCGCCGAGGCTTTACAGCGCCCGAAGAACCCGCTTTGGTGCGACGCACGCATGTGCGCGAAATAGCGTGCGATTTAAA
AATACAGACTGTAGGGGCCT

Downstream 100 bases:

>100_bases
CCTTTTCCATCCGCACGGCCTTATTGGTGCCGTGCGGATGGGCGAAATCACCCACCATCGCCGGTCCGAGGCCGGGGATC
TGAAACGGACCCATGCTGCA

Product: GDP-mannose 1-phosphate guanylyltransferase

Products: NA

Alternate protein names: Mannose-6-phosphate isomerase; Phosphohexomutase; Phosphomannose isomerase; PMI; Mannose-1-phosphate guanylyl transferase; GDP-mannose pyrophosphorylase; GMP; GMPP [H]

Number of amino acids: Translated: 475; Mature: 475

Protein sequence:

>475_residues
MMVSRHKIVPVILAGGTGTRLWPLSRQSLPKQFIALVSENTLYQDTLLRVAESDVFLPPVVITGTDFRFFAKRQAAEIEI
HPTVLLEPVRRDSGPALLAAAAYVRDQHGPETLVLALAADHVVSNPDAFRACVNSAAEAASKGHIVTFGIRPQGPSTAYG
YIKPGTVVEGTDAALVDRFVEKPDAETAARYVADGYLWNSGNFLFPAGLMLEEGARLEPEMTAHAEAAIAKAKPDLTFLN
LDSAEFSASKAISIDFAVLEHTQAAAVVAGDFGWSDIGAWDAVHDVNAQDAHGNVTHGSVSLMDSRNSYVYTDGKLVAGI
GLDGISVVATDDAILVMPSERSQDVKKLVSELSSAKRNEVNEHLKMHRPWGTYQTICRGDRFHVKKIVVEPGGKLSLQKH
YHRAEHWVVVRGTAEVTVDDKVFTVNENESTYLPCGSVHRLANPGRIPLELIEVQTGSYLGEDDIVRLEDVYSRQ

Sequences:

>Translated_475_residues
MMVSRHKIVPVILAGGTGTRLWPLSRQSLPKQFIALVSENTLYQDTLLRVAESDVFLPPVVITGTDFRFFAKRQAAEIEI
HPTVLLEPVRRDSGPALLAAAAYVRDQHGPETLVLALAADHVVSNPDAFRACVNSAAEAASKGHIVTFGIRPQGPSTAYG
YIKPGTVVEGTDAALVDRFVEKPDAETAARYVADGYLWNSGNFLFPAGLMLEEGARLEPEMTAHAEAAIAKAKPDLTFLN
LDSAEFSASKAISIDFAVLEHTQAAAVVAGDFGWSDIGAWDAVHDVNAQDAHGNVTHGSVSLMDSRNSYVYTDGKLVAGI
GLDGISVVATDDAILVMPSERSQDVKKLVSELSSAKRNEVNEHLKMHRPWGTYQTICRGDRFHVKKIVVEPGGKLSLQKH
YHRAEHWVVVRGTAEVTVDDKVFTVNENESTYLPCGSVHRLANPGRIPLELIEVQTGSYLGEDDIVRLEDVYSRQ
>Mature_475_residues
MMVSRHKIVPVILAGGTGTRLWPLSRQSLPKQFIALVSENTLYQDTLLRVAESDVFLPPVVITGTDFRFFAKRQAAEIEI
HPTVLLEPVRRDSGPALLAAAAYVRDQHGPETLVLALAADHVVSNPDAFRACVNSAAEAASKGHIVTFGIRPQGPSTAYG
YIKPGTVVEGTDAALVDRFVEKPDAETAARYVADGYLWNSGNFLFPAGLMLEEGARLEPEMTAHAEAAIAKAKPDLTFLN
LDSAEFSASKAISIDFAVLEHTQAAAVVAGDFGWSDIGAWDAVHDVNAQDAHGNVTHGSVSLMDSRNSYVYTDGKLVAGI
GLDGISVVATDDAILVMPSERSQDVKKLVSELSSAKRNEVNEHLKMHRPWGTYQTICRGDRFHVKKIVVEPGGKLSLQKH
YHRAEHWVVVRGTAEVTVDDKVFTVNENESTYLPCGSVHRLANPGRIPLELIEVQTGSYLGEDDIVRLEDVYSRQ

Specific function: Involved in xanthan production [H]

COG id: COG0836

COG function: function code M; Mannose-1-phosphate guanylyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the mannose-6-phosphate isomerase type 2 family [H]

Homologues:

Organism=Escherichia coli, GI1788362, Length=479, Percent_Identity=46.3465553235908, Blast_Score=416, Evalue=1e-117,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR006375
- InterPro:   IPR001538
- InterPro:   IPR005835
- InterPro:   IPR014710 [H]

Pfam domain/function: PF01050 MannoseP_isomer; PF00483 NTP_transferase [H]

EC number: =5.3.1.8; =2.7.7.13 [H]

Molecular weight: Translated: 51684; Mature: 51684

Theoretical pI: Translated: 5.69; Mature: 5.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMVSRHKIVPVILAGGTGTRLWPLSRQSLPKQFIALVSENTLYQDTLLRVAESDVFLPPV
CCCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCE
VITGTDFRFFAKRQAAEIEIHPTVLLEPVRRDSGPALLAAAAYVRDQHGPETLVLALAAD
EEECCCHHEEECCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEEHH
HVVSNPDAFRACVNSAAEAASKGHIVTFGIRPQGPSTAYGYIKPGTVVEGTDAALVDRFV
HHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCEECCCCHHHHHHHH
EKPDAETAARYVADGYLWNSGNFLFPAGLMLEEGARLEPEMTAHAEAAIAKAKPDLTFLN
HCCCHHHHHHHHHCCEEECCCCEEEECCEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEE
LDSAEFSASKAISIDFAVLEHTQAAAVVAGDFGWSDIGAWDAVHDVNAQDAHGNVTHGSV
CCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCHHCCCCCCCCCCCEECCEE
SLMDSRNSYVYTDGKLVAGIGLDGISVVATDDAILVMPSERSQDVKKLVSELSSAKRNEV
EEEECCCCEEEECCEEEEEECCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHH
NEHLKMHRPWGTYQTICRGDRFHVKKIVVEPGGKLSLQKHYHRAEHWVVVRGTAEVTVDD
HHHHHCCCCCCCHHHHHCCCCEEEEEEEECCCCCEEHHHHHCCCCEEEEEECCEEEEECC
KVFTVNENESTYLPCGSVHRLANPGRIPLELIEVQTGSYLGEDDIVRLEDVYSRQ
EEEEECCCCCEECCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEHHHHCCC
>Mature Secondary Structure
MMVSRHKIVPVILAGGTGTRLWPLSRQSLPKQFIALVSENTLYQDTLLRVAESDVFLPPV
CCCCCCEEEEEEEECCCCCEEEECCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCE
VITGTDFRFFAKRQAAEIEIHPTVLLEPVRRDSGPALLAAAAYVRDQHGPETLVLALAAD
EEECCCHHEEECCCCCEEEECCCEEEEECCCCCCCCHHHHHHHHHCCCCCCEEEEEEEHH
HVVSNPDAFRACVNSAAEAASKGHIVTFGIRPQGPSTAYGYIKPGTVVEGTDAALVDRFV
HHCCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCEEEEECCCCEECCCCHHHHHHHH
EKPDAETAARYVADGYLWNSGNFLFPAGLMLEEGARLEPEMTAHAEAAIAKAKPDLTFLN
HCCCHHHHHHHHHCCEEECCCCEEEECCEEECCCCCCCCCHHHHHHHHHHHCCCCEEEEE
LDSAEFSASKAISIDFAVLEHTQAAAVVAGDFGWSDIGAWDAVHDVNAQDAHGNVTHGSV
CCCCCCCCCCEEEEEEEEECCCCEEEEEEECCCCCCCCCCCHHCCCCCCCCCCCEECCEE
SLMDSRNSYVYTDGKLVAGIGLDGISVVATDDAILVMPSERSQDVKKLVSELSSAKRNEV
EEEECCCCEEEECCEEEEEECCCCEEEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHH
NEHLKMHRPWGTYQTICRGDRFHVKKIVVEPGGKLSLQKHYHRAEHWVVVRGTAEVTVDD
HHHHHCCCCCCCHHHHHCCCCEEEEEEEECCCCCEEHHHHHCCCCEEEEEECCEEEEECC
KVFTVNENESTYLPCGSVHRLANPGRIPLELIEVQTGSYLGEDDIVRLEDVYSRQ
EEEEECCCCCEECCCCCHHHCCCCCCCCEEEEEEECCCCCCCCCCEEEHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 1370280; 11589581 [H]