| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is 158421679
Identifier: 158421679
GI number: 158421679
Start: 67996
End: 69003
Strand: Reverse
Name: 158421679
Synonym: AZC_0055
Alternate gene names: NA
Gene position: 69003-67996 (Counterclockwise)
Preceding gene: 158421680
Following gene: 158421678
Centisome position: 1.29
GC content: 63.39
Gene sequence:
>1008_bases GTGGTACCGAGCGATATCATGATTGGGAATATCATCAGCCACCTTTCACCGAAGAGGGTTTTCGCGGTCCGGCATCTACG CGCAGCTGACGCAGCCAGGGACGCACAGAACTGGGCGCTGGCAGTTGCTGGCTATCGAGCTTACCTCGACCTGATGCCCC AGGACTGGGGCATCCGCGTTCAACTTGGGCATGCTCTCAAGGAGAGCGGCGATCTTCGGGCTGCGGAGGCTGCTTATTCG GCAGCCGCGACGGGAAACCCGTCAGATGCGGATGTTCTCATTCACCTCGGGCATCTGCTGAAGCGCCTGAACCGCCCCGC CGAGGCGCGCACGTTCTTTGAACGCAGCGTCGCGCTCCTCGAAGAGAATGCCAACCTGCCCGGCGGCGACCGCCTTTTGC AGGCCGCGAAGGAGGGCCTCGCATCGCAAGCGCTGGCGACGGCCGATGCGGCCCGCGATGCAAAAAAGTGGCGCGACGCG GCGGAGCATTATCGCACGTATCTGGACGCATTTCCCGGCAACCAGGCGATTTGGATCCAGCTCGGCAACGTGGCCAAGGA AGCGGGCGACTTCAGCACGGCGGATGACGCCTACAGCAAGGCCATTGCGCTCGACGCAACCAATTATGAGCCGCACCTGC AACAAGGCCATCTCCTCAAGCGGCTTGGGCGGCCGGACCAGGCGAGACGCGCCTATGTGCGTGCAAACGAACTGGGTGCG GGATGGCTGGCGCAGACGGAATTGGCCCGGCCCGGCGAACATCCCTCCGAGGGTGCCCCCACCCAGCCGCCCGCTCCGGC GGACGCCGCCACTGCTGAACTCCGGAACGCTGCAGATGCCGAACTGCGCAGCCGGAACTGGATAAAGGCTTTCGAGACGT ATCAGCGTTACACCTCCGCCAACCCGAGCGACAAGGAAGCGTGGTTGAACCTCGCTAAAACCTTGACCCATATCGGGCGC TATCGGCTGGCAGAGGACGCCAGGATGAGAGCAGAACGGCTGGCATGA
Upstream 100 bases:
>100_bases GCCGGCGGGATGACAGAATAAATAAGAGTAAATTAATTCAAAGCGCGATAGCTCTCCAATCTGACTCCGCAGCGACAGCA ACCAGACAGATCTACGAACG
Downstream 100 bases:
>100_bases TGCGCGCGCAACGTCCGTAACCGAGCGGTCGCGCGGCATCCTGCTCCGACGATCGGGCACGTGACACGAGAATGGGCCGA CCTCTGGTTAGATGACCATG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 335; Mature: 335
Protein sequence:
>335_residues MVPSDIMIGNIISHLSPKRVFAVRHLRAADAARDAQNWALAVAGYRAYLDLMPQDWGIRVQLGHALKESGDLRAAEAAYS AAATGNPSDADVLIHLGHLLKRLNRPAEARTFFERSVALLEENANLPGGDRLLQAAKEGLASQALATADAARDAKKWRDA AEHYRTYLDAFPGNQAIWIQLGNVAKEAGDFSTADDAYSKAIALDATNYEPHLQQGHLLKRLGRPDQARRAYVRANELGA GWLAQTELARPGEHPSEGAPTQPPAPADAATAELRNAADAELRSRNWIKAFETYQRYTSANPSDKEAWLNLAKTLTHIGR YRLAEDARMRAERLA
Sequences:
>Translated_335_residues MVPSDIMIGNIISHLSPKRVFAVRHLRAADAARDAQNWALAVAGYRAYLDLMPQDWGIRVQLGHALKESGDLRAAEAAYS AAATGNPSDADVLIHLGHLLKRLNRPAEARTFFERSVALLEENANLPGGDRLLQAAKEGLASQALATADAARDAKKWRDA AEHYRTYLDAFPGNQAIWIQLGNVAKEAGDFSTADDAYSKAIALDATNYEPHLQQGHLLKRLGRPDQARRAYVRANELGA GWLAQTELARPGEHPSEGAPTQPPAPADAATAELRNAADAELRSRNWIKAFETYQRYTSANPSDKEAWLNLAKTLTHIGR YRLAEDARMRAERLA >Mature_335_residues MVPSDIMIGNIISHLSPKRVFAVRHLRAADAARDAQNWALAVAGYRAYLDLMPQDWGIRVQLGHALKESGDLRAAEAAYS AAATGNPSDADVLIHLGHLLKRLNRPAEARTFFERSVALLEENANLPGGDRLLQAAKEGLASQALATADAARDAKKWRDA AEHYRTYLDAFPGNQAIWIQLGNVAKEAGDFSTADDAYSKAIALDATNYEPHLQQGHLLKRLGRPDQARRAYVRANELGA GWLAQTELARPGEHPSEGAPTQPPAPADAATAELRNAADAELRSRNWIKAFETYQRYTSANPSDKEAWLNLAKTLTHIGR YRLAEDARMRAERLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36740; Mature: 36740
Theoretical pI: Translated: 8.00; Mature: 8.00
Prosite motif: PS50005 TPR L=RR ; PS50293 TPR_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.2 %Met (Translated Protein) 1.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MVPSDIMIGNIISHLSPKRVFAVRHLRAADAARDAQNWALAVAGYRAYLDLMPQDWGIRV CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCCEEE QLGHALKESGDLRAAEAAYSAAATGNPSDADVLIHLGHLLKRLNRPAEARTFFERSVALL EECHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EENANLPGGDRLLQAAKEGLASQALATADAARDAKKWRDAAEHYRTYLDAFPGNQAIWIQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LGNVAKEAGDFSTADDAYSKAIALDATNYEPHLQQGHLLKRLGRPDQARRAYVRANELGA ECHHHHHHCCCCCCHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC GWLAQTELARPGEHPSEGAPTQPPAPADAATAELRNAADAELRSRNWIKAFETYQRYTSA CHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPSDKEAWLNLAKTLTHIGRYRLAEDARMRAERLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MVPSDIMIGNIISHLSPKRVFAVRHLRAADAARDAQNWALAVAGYRAYLDLMPQDWGIRV CCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHEEHHHHHHHHHHCCCCCCCEEE QLGHALKESGDLRAAEAAYSAAATGNPSDADVLIHLGHLLKRLNRPAEARTFFERSVALL EECHHHHHCCCCHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH EENANLPGGDRLLQAAKEGLASQALATADAARDAKKWRDAAEHYRTYLDAFPGNQAIWIQ HHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEEEE LGNVAKEAGDFSTADDAYSKAIALDATNYEPHLQQGHLLKRLGRPDQARRAYVRANELGA ECHHHHHHCCCCCCHHHHHHEEEEECCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHCCC GWLAQTELARPGEHPSEGAPTQPPAPADAATAELRNAADAELRSRNWIKAFETYQRYTSA CHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC NPSDKEAWLNLAKTLTHIGRYRLAEDARMRAERLA CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA