| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836558
GI number: 15836558
Start: 1175581
End: 1177161
Strand: Direct
Name: Not Available
Synonym: CPj1027
Alternate gene names: NA
Gene position: 1175581-1177161 (Clockwise)
Preceding gene: 15836557
Following gene: 15836559
Centisome position: 95.84
GC content: 43.52
Gene sequence:
>1581_bases ATGCCAGGTTCTGTGTCATCACCTCCTTTGTCTCCTGTAATTGTCCGTGAAAGGGTCCCATCCTCTTCAGGATCCGACCT CATACAGCCTCATGCTGTTTTAAAGATCTCCATCCTAATTTTTGCGCTTGTGACAATTTTAGGAATTGTTCTTGTAGTGT CTAGTGCTTTAGGAGCTCTTCCTAGTTTAGTTTTGACGGTTTCTGGTTGTATTGCAATAGCTGTAGGCCTGATTGGTTTA GGGATTCTTGTGACACGGCTGATTCTCTCTACGATCAGAAAAGTAGATGCCATGGGTTATGATGCTGCGGTCAAAGAAGA GCAGTATTTGTCACGTATCAGAGAATTAGAGTCTGAAAATAGAGAGATTAGAGATAGAAATCGTGCTGTCGAAGATCAGT GTGCCCATTTATCCGAAGAGAACAAGGACCTTAGGGATCCCGAATATCTACATGGAATGACTGAAAGGCTCATTGCGAGC TTAGAAATAGAGAATCAAGCTCTCGTAGCTGAGAACATTCTTCTCAAAGACTGGAATGCAAGCCTATCTAGAGATTTCCG CGCATATAAGCAAAAATTTCCTCTTGGGGCATTAGAACCCTGGAAAGAAGATATTGCATGTATCATGGAACAAAATCTCT TTTTAAAACCGGAATGTATCGCGATGGTTAAGTCTCTTCCATTAGAGACGCAACGGCTGTTTTTATATCCAAAAGGATTT CAGTCTTTAGTTAATCGATTTGCTCCGCGGTCTCGCTTTTTCCAGACTCCAAAGTATGAATATAACAGTAGGAATGAAAA TGAGGACGGAAAGGTAGCCGCAGTGTGCGCCCGTTTGAAAAAAGAATTCTTCAGTGCTGTTTTAGGAGCCTGTAGTTACG AAGAACTAGGGGGCATTTGTGAAAGAGCAGTAGCACTTAAAGAGACGTTGCCATTGCCTGAAGCTGTCTATGATACCCTA GTTCAGGAGTTCCCAAATCTTCTTACTGCTGAGAGTTTATGGAAAGAATGGTGCTTCTATTCCTATCCCTACCTTCGTCC CTATCTTTCTGTGGATTACTGTAAGAGGTTATTTGTACAACTTTTTGAGGAACTCTGCCTAAAGCTTTTTACAACGGGAT CTCCAGAAGACCAAGCTTTGGTTCGCCTTTTCTCTTACTATAGGAATCATATTCCCGCAGTCTTGGCCTCATTTGGTTTG CCCCCGCCTGAGACAGGGGGGTCTGTATTTGTATTGCTACCAAAACAAGAAAACCTTCTTTGGAGTCAAATTGAGGTGCT GGCTACAAGGTATCTCAAAGATACCTTCGTGAGAAACTCAGAATGGACGGGCTCTTTCGAGATGATGTTTTCTTATAACG AGATGTGTAAGGAGATCTCCGAAGGAAGGATTCGTTTTGCTGAAGACTATGAAACGAGGCATTCCGAAGAATTCCCTCCT TCCCCTCTCTCTGAAGAAGGAGAGGGCGAAGAATTCCTTCCTCCTTGCTCTGAAGAAGAGGTTTCGGTTCTTGAGCGCCC AGATCTAGATGTAGACTCTATGTGGGTCTGGCATCCGCCGGTCCCTAAGGGACCTCTTTAA
Upstream 100 bases:
>100_bases GTGAAATCTACTGCGGGCGCATGGATAGGGTCTCGTGGCGCCGTATTCTACAGCCTGGTTTCGTAATTTTAAATAAAATA TTCCGTATCTTTGTTGAAAT
Downstream 100 bases:
>100_bases TCACCTAGAGTTCTATTTTCAGAATCTTCATAGTAGTAATTTTCCTAAGATATAAGGTCTTAAATGAGTTCTAGAGGTTT TAGGATCTTTTTGGAGAGCT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 526; Mature: 525
Protein sequence:
>526_residues MPGSVSSPPLSPVIVRERVPSSSGSDLIQPHAVLKISILIFALVTILGIVLVVSSALGALPSLVLTVSGCIAIAVGLIGL GILVTRLILSTIRKVDAMGYDAAVKEEQYLSRIRELESENREIRDRNRAVEDQCAHLSEENKDLRDPEYLHGMTERLIAS LEIENQALVAENILLKDWNASLSRDFRAYKQKFPLGALEPWKEDIACIMEQNLFLKPECIAMVKSLPLETQRLFLYPKGF QSLVNRFAPRSRFFQTPKYEYNSRNENEDGKVAAVCARLKKEFFSAVLGACSYEELGGICERAVALKETLPLPEAVYDTL VQEFPNLLTAESLWKEWCFYSYPYLRPYLSVDYCKRLFVQLFEELCLKLFTTGSPEDQALVRLFSYYRNHIPAVLASFGL PPPETGGSVFVLLPKQENLLWSQIEVLATRYLKDTFVRNSEWTGSFEMMFSYNEMCKEISEGRIRFAEDYETRHSEEFPP SPLSEEGEGEEFLPPCSEEEVSVLERPDLDVDSMWVWHPPVPKGPL
Sequences:
>Translated_526_residues MPGSVSSPPLSPVIVRERVPSSSGSDLIQPHAVLKISILIFALVTILGIVLVVSSALGALPSLVLTVSGCIAIAVGLIGL GILVTRLILSTIRKVDAMGYDAAVKEEQYLSRIRELESENREIRDRNRAVEDQCAHLSEENKDLRDPEYLHGMTERLIAS LEIENQALVAENILLKDWNASLSRDFRAYKQKFPLGALEPWKEDIACIMEQNLFLKPECIAMVKSLPLETQRLFLYPKGF QSLVNRFAPRSRFFQTPKYEYNSRNENEDGKVAAVCARLKKEFFSAVLGACSYEELGGICERAVALKETLPLPEAVYDTL VQEFPNLLTAESLWKEWCFYSYPYLRPYLSVDYCKRLFVQLFEELCLKLFTTGSPEDQALVRLFSYYRNHIPAVLASFGL PPPETGGSVFVLLPKQENLLWSQIEVLATRYLKDTFVRNSEWTGSFEMMFSYNEMCKEISEGRIRFAEDYETRHSEEFPP SPLSEEGEGEEFLPPCSEEEVSVLERPDLDVDSMWVWHPPVPKGPL >Mature_525_residues PGSVSSPPLSPVIVRERVPSSSGSDLIQPHAVLKISILIFALVTILGIVLVVSSALGALPSLVLTVSGCIAIAVGLIGLG ILVTRLILSTIRKVDAMGYDAAVKEEQYLSRIRELESENREIRDRNRAVEDQCAHLSEENKDLRDPEYLHGMTERLIASL EIENQALVAENILLKDWNASLSRDFRAYKQKFPLGALEPWKEDIACIMEQNLFLKPECIAMVKSLPLETQRLFLYPKGFQ SLVNRFAPRSRFFQTPKYEYNSRNENEDGKVAAVCARLKKEFFSAVLGACSYEELGGICERAVALKETLPLPEAVYDTLV QEFPNLLTAESLWKEWCFYSYPYLRPYLSVDYCKRLFVQLFEELCLKLFTTGSPEDQALVRLFSYYRNHIPAVLASFGLP PPETGGSVFVLLPKQENLLWSQIEVLATRYLKDTFVRNSEWTGSFEMMFSYNEMCKEISEGRIRFAEDYETRHSEEFPPS PLSEEGEGEEFLPPCSEEEVSVLERPDLDVDSMWVWHPPVPKGPL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 59649; Mature: 59518
Theoretical pI: Translated: 4.66; Mature: 4.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPGSVSSPPLSPVIVRERVPSSSGSDLIQPHAVLKISILIFALVTILGIVLVVSSALGAL CCCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PSLVLTVSGCIAIAVGLIGLGILVTRLILSTIRKVDAMGYDAAVKEEQYLSRIRELESEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH REIRDRNRAVEDQCAHLSEENKDLRDPEYLHGMTERLIASLEIENQALVAENILLKDWNA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC SLSRDFRAYKQKFPLGALEPWKEDIACIMEQNLFLKPECIAMVKSLPLETQRLFLYPKGF HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHEEECCHHH QSLVNRFAPRSRFFQTPKYEYNSRNENEDGKVAAVCARLKKEFFSAVLGACSYEELGGIC HHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ERAVALKETLPLPEAVYDTLVQEFPNLLTAESLWKEWCFYSYPYLRPYLSVDYCKRLFVQ HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH LFEELCLKLFTTGSPEDQALVRLFSYYRNHIPAVLASFGLPPPETGGSVFVLLPKQENLL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHH WSQIEVLATRYLKDTFVRNSEWTGSFEMMFSYNEMCKEISEGRIRFAEDYETRHSEEFPP HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEHHHHHHHCCCCCCC SPLSEEGEGEEFLPPCSEEEVSVLERPDLDVDSMWVWHPPVPKGPL CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCC >Mature Secondary Structure PGSVSSPPLSPVIVRERVPSSSGSDLIQPHAVLKISILIFALVTILGIVLVVSSALGAL CCCCCCCCCCCHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PSLVLTVSGCIAIAVGLIGLGILVTRLILSTIRKVDAMGYDAAVKEEQYLSRIRELESEN HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHH REIRDRNRAVEDQCAHLSEENKDLRDPEYLHGMTERLIASLEIENQALVAENILLKDWNA HHHHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCCC SLSRDFRAYKQKFPLGALEPWKEDIACIMEQNLFLKPECIAMVKSLPLETQRLFLYPKGF HHHHHHHHHHHHCCCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHCCCCCHHEEECCHHH QSLVNRFAPRSRFFQTPKYEYNSRNENEDGKVAAVCARLKKEFFSAVLGACSYEELGGIC HHHHHHHCCHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCHHHHHHHH ERAVALKETLPLPEAVYDTLVQEFPNLLTAESLWKEWCFYSYPYLRPYLSVDYCKRLFVQ HHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHCCHHHHHHHHHH LFEELCLKLFTTGSPEDQALVRLFSYYRNHIPAVLASFGLPPPETGGSVFVLLPKQENLL HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEECCCCCHH WSQIEVLATRYLKDTFVRNSEWTGSFEMMFSYNEMCKEISEGRIRFAEDYETRHSEEFPP HHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCEEEHHHHHHHCCCCCCC SPLSEEGEGEEFLPPCSEEEVSVLERPDLDVDSMWVWHPPVPKGPL CCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCCCEEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA