Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836525

GI number: 15836525

Start: 1138804

End: 1140849

Strand: Direct

Name: Not Available

Synonym: CPj0994

Alternate gene names: NA

Gene position: 1138804-1140849 (Clockwise)

Preceding gene: 15836524

Following gene: 15836528

Centisome position: 92.84

GC content: 37.83

Gene sequence:

>2046_bases
ATGAAAAGGTCTCGACGTAACTTCGAACAGGCTTTAGAAAATTTAGAAAAGCTCAAAGAGATTTCTTTAGCTACCTCGAA
TGATTCCTACCTAAATAATCCAGCACGCTTCAACCAGAGAAAACAAACAGGCTCTTCTGTCATGGAAATGAAAGAGGCTC
TGAAAAATGTTGAAAATTATCTACTCGAAATCAGCTGTGTTTCGAAAAGTCATGCAGATAAAGCTCTTAAAGAATCAGAT
TTTTTAATTGCAGGTGTGCAAAACGTCTTTTCCTTTTTAGAGAACCAAGAAGACCTCTATAAGTCTTTACTAGACGAATA
TTCTGAAGTTACTAAGGCTTATGATGAGGTAAAAAAGAATCTTAAAGAAGTCCCAACTTATGACCTCTCGACAGATGAAG
AAACCGAGGAACACAAAGAACCCGAGTGCTTTTTAAATAACCTTGTTGAAGTTAAGCGGGACCGTTCCTATGAGCTTTTC
TACATGCTAGATGAGCAAGACAAACGCTTTTATAACGATGCTCTTGTCCAGATTATCTATAAGCAAAATAAACTACACGA
AACTGTAAATGAAGGTGACCCCCTAACTAAAACACTCCTCTGGAATAGTGAAGAAGTTAAAAACATTGCCTCTTCGCTGG
TTATCGTAAATGATATGCCCTTGCGATTGTTTTATCAGCGTGCTTTAAGCCATTTAGACATCGAAGCTGTGGTCAAAGTT
CATAACGCAGTCATGGCGTTGTTCTTCTCAAGATACGAAGCTACAATGGTCTTCAAAAGCCCTAAGAAGCATAATATATG
GTACTTTAATGACTTTTTGCTCTTTTTGAGAGAAGCATGGAAAGACTTAAATAATAACGTGATTGATTCTCAAGAGAGAA
AACAGACGAAACTTCTTGCTTCCGCTTTAAGTCTCGGGATCTTTGAAAGCAAACTAGTATTTGAAGAGGCATCTCGTTAT
CTCTACTTCAATATTCAAACGAAATTAGAAAACGCCAACGGGAAGAAGCCTCTTTCACCAGGACAATATCTTACAGACGC
TTATGAAGAACTTCATCGTCTTATCTCTAAATATCCTAACGGGCCTCTTTTTAAAGCTATGGATAGAGTTTTAGAACATG
AATCCCGTCCCTATGATCCTATGATTTTAGGAATCCTCCCTAGCCTTGAAGGAACGTTAAAGCTCCACGGGAAATCTATA
GATATCATACGATCTCCCAGTCCTGTGACCCAAAGCTCGATTTTGTATGCTAATTGTAATGAGGAATTCTTAGGGTTTCT
TAATGCTAAAGCACATCGCAGTGAGGTGACTTTAGTTCTAAATATTCAGAATCGTATATCAAGAAAAGAACGTGCGCGAA
GCCGTGTTATCGAAGAAGCTTTAGAACAAGAAGAACACGCCCCCTATGTCCACGCCTTCTCTTTCCCTGAACCCGAAGAA
CTCCTCCAGAATTTGGAAAGTATTCATGGAGATATTGAAACTTTTGCTGATTTCTTTTCTATTCTGCAAGAAGAGTTTCA
TAAACCCCTTCTTGCTTCATCATTTTTTCTAACGAAAGAATTAAAAGAGTTCGTAGGTAGCTTCTTAAAAGAAAAACTCA
CGGCGTTGAAAGACATTTTCTTTGCTAAGAAAAAAATTCTATTCAGAAATGATAAGCTTTTGCTTCTACACCTCCTCTCG
TACCTAATTGTCTTTAAGTTAATAGAACGTACCAATCCCAACTCTATTGTCGTCGTATCTAAAGATGGGCTGGATTATGT
TTCTGTCTTTATTGCGGGATTTGCGTTCTTTTCTAGGGAAGCGTTTTGGGATGAACATAGCTTGAAACTATTACTTACGA
ATGTTTTATCTCCTACACTCGTAGCTAGAGATCGTCTGGTCTTCGTATCCCATATTGAACTCTTAAGTAAATTTGTAAAC
TGTCTAAAGAAAAATCGTCAGGGATTTTCTAGTCTGAAGTCTTTCTTCAAAGATGACATTGAAGGTTGGGAGTTCACCGG
GTACTTGCATGAACTCACTGAAGTTTCGCATAAGCATAATTTGTAA

Upstream 100 bases:

>100_bases
ATTTTTAAACTAATTGATGGTTAATTTGTTTTTATAATAAATTAGAAAGACGATCTCATAAAAAATAATCTAACTTTTTT
GGTTCCATCGAGGAGGTAGA

Downstream 100 bases:

>100_bases
GTAGAAAGAGTACTATAAGAGGAAAAGCCATCACAGGAAGTGTGGGAAGAACGCTGCTACTGGCTAAGACGATTCCCGCC
TTTAGGAAGACAAAGAAAAT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 681; Mature: 681

Protein sequence:

>681_residues
MKRSRRNFEQALENLEKLKEISLATSNDSYLNNPARFNQRKQTGSSVMEMKEALKNVENYLLEISCVSKSHADKALKESD
FLIAGVQNVFSFLENQEDLYKSLLDEYSEVTKAYDEVKKNLKEVPTYDLSTDEETEEHKEPECFLNNLVEVKRDRSYELF
YMLDEQDKRFYNDALVQIIYKQNKLHETVNEGDPLTKTLLWNSEEVKNIASSLVIVNDMPLRLFYQRALSHLDIEAVVKV
HNAVMALFFSRYEATMVFKSPKKHNIWYFNDFLLFLREAWKDLNNNVIDSQERKQTKLLASALSLGIFESKLVFEEASRY
LYFNIQTKLENANGKKPLSPGQYLTDAYEELHRLISKYPNGPLFKAMDRVLEHESRPYDPMILGILPSLEGTLKLHGKSI
DIIRSPSPVTQSSILYANCNEEFLGFLNAKAHRSEVTLVLNIQNRISRKERARSRVIEEALEQEEHAPYVHAFSFPEPEE
LLQNLESIHGDIETFADFFSILQEEFHKPLLASSFFLTKELKEFVGSFLKEKLTALKDIFFAKKKILFRNDKLLLLHLLS
YLIVFKLIERTNPNSIVVVSKDGLDYVSVFIAGFAFFSREAFWDEHSLKLLLTNVLSPTLVARDRLVFVSHIELLSKFVN
CLKKNRQGFSSLKSFFKDDIEGWEFTGYLHELTEVSHKHNL

Sequences:

>Translated_681_residues
MKRSRRNFEQALENLEKLKEISLATSNDSYLNNPARFNQRKQTGSSVMEMKEALKNVENYLLEISCVSKSHADKALKESD
FLIAGVQNVFSFLENQEDLYKSLLDEYSEVTKAYDEVKKNLKEVPTYDLSTDEETEEHKEPECFLNNLVEVKRDRSYELF
YMLDEQDKRFYNDALVQIIYKQNKLHETVNEGDPLTKTLLWNSEEVKNIASSLVIVNDMPLRLFYQRALSHLDIEAVVKV
HNAVMALFFSRYEATMVFKSPKKHNIWYFNDFLLFLREAWKDLNNNVIDSQERKQTKLLASALSLGIFESKLVFEEASRY
LYFNIQTKLENANGKKPLSPGQYLTDAYEELHRLISKYPNGPLFKAMDRVLEHESRPYDPMILGILPSLEGTLKLHGKSI
DIIRSPSPVTQSSILYANCNEEFLGFLNAKAHRSEVTLVLNIQNRISRKERARSRVIEEALEQEEHAPYVHAFSFPEPEE
LLQNLESIHGDIETFADFFSILQEEFHKPLLASSFFLTKELKEFVGSFLKEKLTALKDIFFAKKKILFRNDKLLLLHLLS
YLIVFKLIERTNPNSIVVVSKDGLDYVSVFIAGFAFFSREAFWDEHSLKLLLTNVLSPTLVARDRLVFVSHIELLSKFVN
CLKKNRQGFSSLKSFFKDDIEGWEFTGYLHELTEVSHKHNL
>Mature_681_residues
MKRSRRNFEQALENLEKLKEISLATSNDSYLNNPARFNQRKQTGSSVMEMKEALKNVENYLLEISCVSKSHADKALKESD
FLIAGVQNVFSFLENQEDLYKSLLDEYSEVTKAYDEVKKNLKEVPTYDLSTDEETEEHKEPECFLNNLVEVKRDRSYELF
YMLDEQDKRFYNDALVQIIYKQNKLHETVNEGDPLTKTLLWNSEEVKNIASSLVIVNDMPLRLFYQRALSHLDIEAVVKV
HNAVMALFFSRYEATMVFKSPKKHNIWYFNDFLLFLREAWKDLNNNVIDSQERKQTKLLASALSLGIFESKLVFEEASRY
LYFNIQTKLENANGKKPLSPGQYLTDAYEELHRLISKYPNGPLFKAMDRVLEHESRPYDPMILGILPSLEGTLKLHGKSI
DIIRSPSPVTQSSILYANCNEEFLGFLNAKAHRSEVTLVLNIQNRISRKERARSRVIEEALEQEEHAPYVHAFSFPEPEE
LLQNLESIHGDIETFADFFSILQEEFHKPLLASSFFLTKELKEFVGSFLKEKLTALKDIFFAKKKILFRNDKLLLLHLLS
YLIVFKLIERTNPNSIVVVSKDGLDYVSVFIAGFAFFSREAFWDEHSLKLLLTNVLSPTLVARDRLVFVSHIELLSKFVN
CLKKNRQGFSSLKSFFKDDIEGWEFTGYLHELTEVSHKHNL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 79175; Mature: 79175

Theoretical pI: Translated: 6.28; Mature: 6.28

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRSRRNFEQALENLEKLKEISLATSNDSYLNNPARFNQRKQTGSSVMEMKEALKNVENY
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEISCVSKSHADKALKESDFLIAGVQNVFSFLENQEDLYKSLLDEYSEVTKAYDEVKKN
HHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
LKEVPTYDLSTDEETEEHKEPECFLNNLVEVKRDRSYELFYMLDEQDKRFYNDALVQIIY
HHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHH
KQNKLHETVNEGDPLTKTLLWNSEEVKNIASSLVIVNDMPLRLFYQRALSHLDIEAVVKV
HHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCHHHHHHH
HNAVMALFFSRYEATMVFKSPKKHNIWYFNDFLLFLREAWKDLNNNVIDSQERKQTKLLA
HHHHHHHHHHHHHHEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SALSLGIFESKLVFEEASRYLYFNIQTKLENANGKKPLSPGQYLTDAYEELHRLISKYPN
HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
GPLFKAMDRVLEHESRPYDPMILGILPSLEGTLKLHGKSIDIIRSPSPVTQSSILYANCN
CHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCEEEEEECCCCCCCCCEEEECCC
EEFLGFLNAKAHRSEVTLVLNIQNRISRKERARSRVIEEALEQEEHAPYVHAFSFPEPEE
HHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH
LLQNLESIHGDIETFADFFSILQEEFHKPLLASSFFLTKELKEFVGSFLKEKLTALKDIF
HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAKKKILFRNDKLLLLHLLSYLIVFKLIERTNPNSIVVVSKDGLDYVSVFIAGFAFFSRE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
AFWDEHSLKLLLTNVLSPTLVARDRLVFVSHIELLSKFVNCLKKNRQGFSSLKSFFKDDI
HHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EGWEFTGYLHELTEVSHKHNL
CCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRSRRNFEQALENLEKLKEISLATSNDSYLNNPARFNQRKQTGSSVMEMKEALKNVENY
CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
LLEISCVSKSHADKALKESDFLIAGVQNVFSFLENQEDLYKSLLDEYSEVTKAYDEVKKN
HHHHHHHCHHHHHHHHHHCCHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHH
LKEVPTYDLSTDEETEEHKEPECFLNNLVEVKRDRSYELFYMLDEQDKRFYNDALVQIIY
HHHCCCCCCCCCCCHHHCCCHHHHHHHHHHHHCCCCEEEEEEECCHHHHHHHHHHHHHHH
KQNKLHETVNEGDPLTKTLLWNSEEVKNIASSLVIVNDMPLRLFYQRALSHLDIEAVVKV
HHHHHHHHHCCCCCHHHHHHCCHHHHHHHHHHEEEECCCHHHHHHHHHHHHCCHHHHHHH
HNAVMALFFSRYEATMVFKSPKKHNIWYFNDFLLFLREAWKDLNNNVIDSQERKQTKLLA
HHHHHHHHHHHHHHEEEEECCCCCCCEEHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
SALSLGIFESKLVFEEASRYLYFNIQTKLENANGKKPLSPGQYLTDAYEELHRLISKYPN
HHHHHHHHHHHHHHHHCCCEEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
GPLFKAMDRVLEHESRPYDPMILGILPSLEGTLKLHGKSIDIIRSPSPVTQSSILYANCN
CHHHHHHHHHHHHCCCCCCCEEEEECCCCCCCEEECCCEEEEEECCCCCCCCCEEEECCC
EEFLGFLNAKAHRSEVTLVLNIQNRISRKERARSRVIEEALEQEEHAPYVHAFSFPEPEE
HHHHHHHCCCCCCCCEEEEEECHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECCCCHHH
LLQNLESIHGDIETFADFFSILQEEFHKPLLASSFFLTKELKEFVGSFLKEKLTALKDIF
HHHHHHHHCCCHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FAKKKILFRNDKLLLLHLLSYLIVFKLIERTNPNSIVVVSKDGLDYVSVFIAGFAFFSRE
HHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHHHHHH
AFWDEHSLKLLLTNVLSPTLVARDRLVFVSHIELLSKFVNCLKKNRQGFSSLKSFFKDDI
HHCCCHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
EGWEFTGYLHELTEVSHKHNL
CCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA