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The map label for this gene is sdhC

Identifier: 15836321

GI number: 15836321

Start: 885863

End: 886756

Strand: Direct

Name: sdhC

Synonym: CPj0788

Alternate gene names: NA

Gene position: 885863-886756 (Clockwise)

Preceding gene: 15836320

Following gene: 15836322

Centisome position: 72.22

GC content: 41.83

Gene sequence:

>894_bases
ATGTCACGACATGAAATCTGCCCAGAAGTGTCACACAAGAAAGGCAAGTATTATAGCACCTTTATCTTCCGTTGTATTCA
CTCCTTAGCGGGTATAGCGTTTACTTTTTTCCTATGTGAACACCTATTTACGAACATGCTAGCTTCTTCTTACTTTTCCC
AGGGGAAGGGTTTCGTTGCTATGGTCAATGGTTTTCATAAGATCCCAGGGCTGAAAATTATTGAAGTGGCGGGTTTAGTC
CTTCCTTTTCTCTGTCATGCGATTATCGGCATCGTATATCTCTTTCAAGGAAAAAGTAATTGTTATTCTGGTGACGGAAG
TCGACCTCATTTGCGTTATGCTAAAAATTATAGCTATACGTGGCAAAGGTGGACTGCCTGGATTTTACTCTTTGGAATTG
CTTTCCACGTTGTGCATTTGCGTTTTATCCGTTATCCAGTCCATGTTGATATCCATGGAACTACCTATTATGCTGTAGAC
ATTCAACCTTCTCGCTATGACGTGATTGTTAGAGGGACTAAAGGCTTTTTAACTTTGAATCTTCCCAATACAGAAGCTTC
GAGTATCGAGGTGTCTCGTCATGATTTAGGTGGTGCTGATGCTGCGTTATTGTCGGAGAGGAACTCCTATTTATTGACTC
CAAGTGCAGGTACCGCATTTCTTTATGTAGTTCGTGATGCCTTGGGATCACTATTCATAGCTCTTCTCTATACTATTTTG
GTCATTGCTGCAGCATTTCATGGGTTTAATGGGTTGTGGACCTTTTGTTGTCGTTGGGGTGTCGTTGTTTCTCTGAGGAT
GCAAGGGGTATTGAGGATAGTATGTTACCTCGCTATGATTGTTGTGACTTTCATGGGAGTGAGTGCGGTTTGGAATTTGT
ATAGTGTGGCATAG

Upstream 100 bases:

>100_bases
TTGTCATATAAGCTTCTGTTTCTTATGAAAAATTACTTTCCATAATTTTATTCTAGCCTCTATCTTGAGTTGAACTTAAA
GTTTAGTAAAAAGTCTTAGA

Downstream 100 bases:

>100_bases
CAAATGGATGAGAATCGAAAAGTAATCGTTGTTGGTGGGGGATTGGCAGGATTATCCGCAGCTATGCAGTTAGCCAACCT
TGGGATTATTGTAGAGCTCG

Product: succinate dehydrogenase

Products: fumarate; reduced acceptor

Alternate protein names: Succinate Dehydrogenase Cytochrome B; Succinate Dehydrogenase; Subunit Of Succinate Dehydrogenase; Succinate Dehydrogenase Subunit C; Succinate Dehydrogenase Cytochrome B-; Succinate Dehydrogenase Subunit

Number of amino acids: Translated: 297; Mature: 296

Protein sequence:

>297_residues
MSRHEICPEVSHKKGKYYSTFIFRCIHSLAGIAFTFFLCEHLFTNMLASSYFSQGKGFVAMVNGFHKIPGLKIIEVAGLV
LPFLCHAIIGIVYLFQGKSNCYSGDGSRPHLRYAKNYSYTWQRWTAWILLFGIAFHVVHLRFIRYPVHVDIHGTTYYAVD
IQPSRYDVIVRGTKGFLTLNLPNTEASSIEVSRHDLGGADAALLSERNSYLLTPSAGTAFLYVVRDALGSLFIALLYTIL
VIAAAFHGFNGLWTFCCRWGVVVSLRMQGVLRIVCYLAMIVVTFMGVSAVWNLYSVA

Sequences:

>Translated_297_residues
MSRHEICPEVSHKKGKYYSTFIFRCIHSLAGIAFTFFLCEHLFTNMLASSYFSQGKGFVAMVNGFHKIPGLKIIEVAGLV
LPFLCHAIIGIVYLFQGKSNCYSGDGSRPHLRYAKNYSYTWQRWTAWILLFGIAFHVVHLRFIRYPVHVDIHGTTYYAVD
IQPSRYDVIVRGTKGFLTLNLPNTEASSIEVSRHDLGGADAALLSERNSYLLTPSAGTAFLYVVRDALGSLFIALLYTIL
VIAAAFHGFNGLWTFCCRWGVVVSLRMQGVLRIVCYLAMIVVTFMGVSAVWNLYSVA
>Mature_296_residues
SRHEICPEVSHKKGKYYSTFIFRCIHSLAGIAFTFFLCEHLFTNMLASSYFSQGKGFVAMVNGFHKIPGLKIIEVAGLVL
PFLCHAIIGIVYLFQGKSNCYSGDGSRPHLRYAKNYSYTWQRWTAWILLFGIAFHVVHLRFIRYPVHVDIHGTTYYAVDI
QPSRYDVIVRGTKGFLTLNLPNTEASSIEVSRHDLGGADAALLSERNSYLLTPSAGTAFLYVVRDALGSLFIALLYTILV
IAAAFHGFNGLWTFCCRWGVVVSLRMQGVLRIVCYLAMIVVTFMGVSAVWNLYSVA

Specific function: Unknown

COG id: COG2009

COG function: function code C; Succinate dehydrogenase/fumarate reductase, cytochrome b subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: 1.3.99.1

Molecular weight: Translated: 33340; Mature: 33209

Theoretical pI: Translated: 9.26; Mature: 9.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRHEICPEVSHKKGKYYSTFIFRCIHSLAGIAFTFFLCEHLFTNMLASSYFSQGKGFVA
CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
MVNGFHKIPGLKIIEVAGLVLPFLCHAIIGIVYLFQGKSNCYSGDGSRPHLRYAKNYSYT
EECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCH
WQRWTAWILLFGIAFHVVHLRFIRYPVHVDIHGTTYYAVDIQPSRYDVIVRGTKGFLTLN
HHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCEEEEEEECCCCEEEEEECCCCEEEEE
LPNTEASSIEVSRHDLGGADAALLSERNSYLLTPSAGTAFLYVVRDALGSLFIALLYTIL
CCCCCCCCEEEECCCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
VIAAAFHGFNGLWTFCCRWGVVVSLRMQGVLRIVCYLAMIVVTFMGVSAVWNLYSVA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SRHEICPEVSHKKGKYYSTFIFRCIHSLAGIAFTFFLCEHLFTNMLASSYFSQGKGFVA
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEE
MVNGFHKIPGLKIIEVAGLVLPFLCHAIIGIVYLFQGKSNCYSGDGSRPHLRYAKNYSYT
EECCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCEEEECCCCCH
WQRWTAWILLFGIAFHVVHLRFIRYPVHVDIHGTTYYAVDIQPSRYDVIVRGTKGFLTLN
HHHHHHHHHHHHHHHHHHHHHHHHCEEEEEEECCEEEEEEECCCCEEEEEECCCCEEEEE
LPNTEASSIEVSRHDLGGADAALLSERNSYLLTPSAGTAFLYVVRDALGSLFIALLYTIL
CCCCCCCCEEEECCCCCCCHHHHHHCCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHH
VIAAAFHGFNGLWTFCCRWGVVVSLRMQGVLRIVCYLAMIVVTFMGVSAVWNLYSVA
HHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: succinate; acceptor

Specific reaction: succinate + acceptor = fumarate + reduced acceptor

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA