| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836309
GI number: 15836309
Start: 873567
End: 874811
Strand: Direct
Name: Not Available
Synonym: CPj0776
Alternate gene names: 15836309
Gene position: 873567-874811 (Clockwise)
Preceding gene: 15836307
Following gene: 15836310
Centisome position: 71.22
GC content: 42.33
Gene sequence:
>1245_bases ATGAAGAAAATTTTTTACTCTTTTGTATTGTTAAGTTGTATTTTCCCTTACGTAGGGTGTGCTCAAGTTTTTGTAGGCTT AGATCGTATTTTTTCTGAAGGGGAGTATACACGTTGCATTCAAGGCAAGAAAATCGCTCTAATTTCTCATAGCGCAGCTA TCAATAGTCGTGGGCAGGATGCCCTCTCTGTATTCTATTCTCGTAAGCATGATTGTACCGTGGAAATCCTCTGTACGTTG GAACACGGCTATTATGGAGCCACACCTACAGAAACGGTGGGGAATCAGCCATCCAGATATCCAAATTTACGTTCTGTATC CTTGTATGGAGTGAAAGAGGTTCCCAAAGAGGTTGCCGAACATTGTGATGTATTTGTTTATGATGTTCAGGATATCGGAG TGCGTTCTTATAGCTTTGTTACCGTGCTGATGCAAATAGTAAAGGCTTCTGAACGGTACGGAAAACAGCTCATTGTTTTA GATCGGCCGAATCCTATGGGAGGAAGGATTGTTGATGGACCTCTTCCTAATCCCACAACTTCAGGTTCCCTAGCGATTCC TTATTGTTATGGCATGACACCTGGGGAATTAGCGTTGTTTTTTAAAAAGACATACGCTCCTAACGCTAATGTTGTCGTGA TCCCTATGAAAGGGTGGAATCGCTCGATGACCTTTGATGAAACAGGATTGATTTGGATGCCCACAAGTCCTCAAATGCCA GATCCACAATCACCGTTTTTCTATGCTGCCACAGGGATTTTAGGTGCCTTGTCTGTAGCAAGTATCGGTGTAGGTTATAC CTTACCTTTCAAAGTGCTCGGAGCTCCTTGGATGGACGGGGAAAAAGTTGCCGACGAGCTGAATCGCATGAAGCTTCCCG GTGTTCTGTTTCTTCCTTTTTTCTATGAGCCTTTTTTCGGAAAATACAAAATGGAGATGTGCTCCGGGGTTCTTCTTGTT CTTCAAGATCCTAAGATTTTCTATCCAGTAGAAACACAATGTACAATTTGGGGTGTATTAAAAGCATTATATCCTAAACA GGTTGAGCAAACGTTAAAATCCATAGAGCGCATTCCTGCACGTCGATCTTCCATATGCAATTTATTTGGGGGGGATGAAT TTCTCAGCATATCGCACAAAGAGCGCTATATTGTATGGCCATTGCGTAGGTTATGTAAAGAGTCTCGAGAGAGCTTTCAT CAACTGCGTAGTTCATGTTTACTCTCAGAGTATGCAGAATCCTAA
Upstream 100 bases:
>100_bases ATCTACGCAATCGCTAGTAAGGTAGACATTCTAGTTTATTTTTGTTCTGAAGAACTTTTATGATTGCCTGTTGATGTTTT TTCAATTTTTGAGTTTCACA
Downstream 100 bases:
>100_bases CAAGAACACTTAAGATCCTCTACGGTTTGACAGGAATATTTCTTGTTTCTAAGATGACCTTTTCATGGCAGAAGCCTTTC CTGCATTAAGAATAGACATC
Product: hypothetical protein
Products: NA
Alternate protein names: ORF2 [H]
Number of amino acids: Translated: 414; Mature: 414
Protein sequence:
>414_residues MKKIFYSFVLLSCIFPYVGCAQVFVGLDRIFSEGEYTRCIQGKKIALISHSAAINSRGQDALSVFYSRKHDCTVEILCTL EHGYYGATPTETVGNQPSRYPNLRSVSLYGVKEVPKEVAEHCDVFVYDVQDIGVRSYSFVTVLMQIVKASERYGKQLIVL DRPNPMGGRIVDGPLPNPTTSGSLAIPYCYGMTPGELALFFKKTYAPNANVVVIPMKGWNRSMTFDETGLIWMPTSPQMP DPQSPFFYAATGILGALSVASIGVGYTLPFKVLGAPWMDGEKVADELNRMKLPGVLFLPFFYEPFFGKYKMEMCSGVLLV LQDPKIFYPVETQCTIWGVLKALYPKQVEQTLKSIERIPARRSSICNLFGGDEFLSISHKERYIVWPLRRLCKESRESFH QLRSSCLLSEYAES
Sequences:
>Translated_414_residues MKKIFYSFVLLSCIFPYVGCAQVFVGLDRIFSEGEYTRCIQGKKIALISHSAAINSRGQDALSVFYSRKHDCTVEILCTL EHGYYGATPTETVGNQPSRYPNLRSVSLYGVKEVPKEVAEHCDVFVYDVQDIGVRSYSFVTVLMQIVKASERYGKQLIVL DRPNPMGGRIVDGPLPNPTTSGSLAIPYCYGMTPGELALFFKKTYAPNANVVVIPMKGWNRSMTFDETGLIWMPTSPQMP DPQSPFFYAATGILGALSVASIGVGYTLPFKVLGAPWMDGEKVADELNRMKLPGVLFLPFFYEPFFGKYKMEMCSGVLLV LQDPKIFYPVETQCTIWGVLKALYPKQVEQTLKSIERIPARRSSICNLFGGDEFLSISHKERYIVWPLRRLCKESRESFH QLRSSCLLSEYAES >Mature_414_residues MKKIFYSFVLLSCIFPYVGCAQVFVGLDRIFSEGEYTRCIQGKKIALISHSAAINSRGQDALSVFYSRKHDCTVEILCTL EHGYYGATPTETVGNQPSRYPNLRSVSLYGVKEVPKEVAEHCDVFVYDVQDIGVRSYSFVTVLMQIVKASERYGKQLIVL DRPNPMGGRIVDGPLPNPTTSGSLAIPYCYGMTPGELALFFKKTYAPNANVVVIPMKGWNRSMTFDETGLIWMPTSPQMP DPQSPFFYAATGILGALSVASIGVGYTLPFKVLGAPWMDGEKVADELNRMKLPGVLFLPFFYEPFFGKYKMEMCSGVLLV LQDPKIFYPVETQCTIWGVLKALYPKQVEQTLKSIERIPARRSSICNLFGGDEFLSISHKERYIVWPLRRLCKESRESFH QLRSSCLLSEYAES
Specific function: Unknown
COG id: COG3876
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008302 [H]
Pfam domain/function: PF07075 DUF1343 [H]
EC number: NA
Molecular weight: Translated: 46535; Mature: 46535
Theoretical pI: Translated: 8.26; Mature: 8.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.9 %Cys (Translated Protein) 2.9 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 2.9 %Cys (Mature Protein) 2.9 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKKIFYSFVLLSCIFPYVGCAQVFVGLDRIFSEGEYTRCIQGKKIALISHSAAINSRGQD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCHHCCCCCHH ALSVFYSRKHDCTVEILCTLEHGYYGATPTETVGNQPSRYPNLRSVSLYGVKEVPKEVAE HHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHCCCCCCCCCCCCEEEECCHHHHHHHHHH HCDVFVYDVQDIGVRSYSFVTVLMQIVKASERYGKQLIVLDRPNPMGGRIVDGPLPNPTT HCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCCCCCCC SGSLAIPYCYGMTPGELALFFKKTYAPNANVVVIPMKGWNRSMTFDETGLIWMPTSPQMP CCCEEEEEEECCCHHHEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCC DPQSPFFYAATGILGALSVASIGVGYTLPFKVLGAPWMDGEKVADELNRMKLPGVLFLPF CCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEEHH FYEPFFGKYKMEMCSGVLLVLQDPKIFYPVETQCTIWGVLKALYPKQVEQTLKSIERIPA HHCHHCCHHHHHHHCCEEEEEECCEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCC RRSSICNLFGGDEFLSISHKERYIVWPLRRLCKESRESFHQLRSSCLLSEYAES HHHHHHHHCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKKIFYSFVLLSCIFPYVGCAQVFVGLDRIFSEGEYTRCIQGKKIALISHSAAINSRGQD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCEECCCCCEEEEEECCHHCCCCCHH ALSVFYSRKHDCTVEILCTLEHGYYGATPTETVGNQPSRYPNLRSVSLYGVKEVPKEVAE HHHHHHHCCCCCEEEEEEEEECCCCCCCCCHHCCCCCCCCCCCCEEEECCHHHHHHHHHH HCDVFVYDVQDIGVRSYSFVTVLMQIVKASERYGKQLIVLDRPNPMGGRIVDGPLPNPTT HCCEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCEEEEEECCCCCCCEEECCCCCCCCC SGSLAIPYCYGMTPGELALFFKKTYAPNANVVVIPMKGWNRSMTFDETGLIWMPTSPQMP CCCEEEEEEECCCHHHEEEEEECCCCCCCCEEEEECCCCCCCCCCCCCCEEEECCCCCCC DPQSPFFYAATGILGALSVASIGVGYTLPFKVLGAPWMDGEKVADELNRMKLPGVLFLPF CCCCCEEEEHHHHHHHHHHHHHCCCCCCCHHHHCCCCCCHHHHHHHHHHCCCCCEEEEHH FYEPFFGKYKMEMCSGVLLVLQDPKIFYPVETQCTIWGVLKALYPKQVEQTLKSIERIPA HHCHHCCHHHHHHHCCEEEEEECCEEEECCCCCHHHHHHHHHHCHHHHHHHHHHHHHCCC RRSSICNLFGGDEFLSISHKERYIVWPLRRLCKESRESFHQLRSSCLLSEYAES HHHHHHHHCCCCCEEEECCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8011666; 9274029; 9384377 [H]