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Identifier: 15836252

GI number: 15836252

Start: 806324

End: 806560

Strand: Direct

Name: Not Available

Synonym: CPj0720

Alternate gene names: NA

Gene position: 806324-806560 (Clockwise)

Preceding gene: 15836251

Following gene: 15836253

Centisome position: 65.74

GC content: 39.66

Gene sequence:

>237_bases
ATGAAAGAATTTTTAGCCTATATCATTAAGAATCTAGTGGACCGCCCTGAAGAAGTCCGTATTAAAGAAGTTCAGGGGAC
TCACACGATTATTTATGAACTAAGTGTAGCTAAACCTGATATCGGGAAGATCATTGGCAAAGAAGGCCGTACGATCAAAG
CGATTCGTACTCTTCTGGTTTCTGTAGCAAGCAGGACCAATGTAAGGGTCAGTTTAGAAATTATGGAAGAAAAGTAG

Upstream 100 bases:

>100_bases
AAGTTCATTTATTTTAGGAAACGCATTAAAATTAATTAAAATTGAATTTCATTTTTTAACATCTCTTTTTAAAGACAACG
CGAATTAGTTAAGGATTACT

Downstream 100 bases:

>100_bases
CCTTAAGCCTAGCTTAAGTACTTCTCATTGAAATTGCTAGCCTAAGGGAAACCGAAGGCTACCACTTCAATAAAAAATAA
TTGCACGCATAAAGATAAAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 78; Mature: 78

Protein sequence:

>78_residues
MKEFLAYIIKNLVDRPEEVRIKEVQGTHTIIYELSVAKPDIGKIIGKEGRTIKAIRTLLVSVASRTNVRVSLEIMEEK

Sequences:

>Translated_78_residues
MKEFLAYIIKNLVDRPEEVRIKEVQGTHTIIYELSVAKPDIGKIIGKEGRTIKAIRTLLVSVASRTNVRVSLEIMEEK
>Mature_78_residues
MKEFLAYIIKNLVDRPEEVRIKEVQGTHTIIYELSVAKPDIGKIIGKEGRTIKAIRTLLVSVASRTNVRVSLEIMEEK

Specific function: Unknown

COG id: COG1837

COG function: function code R; Predicted RNA-binding protein (contains KH domain)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 KH domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR009019
- InterPro:   IPR004088
- InterPro:   IPR018111
- InterPro:   IPR020627 [H]

Pfam domain/function: PF00013 KH_1 [H]

EC number: NA

Molecular weight: Translated: 8880; Mature: 8880

Theoretical pI: Translated: 10.01; Mature: 10.01

Prosite motif: PS50084 KH_TYPE_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKEFLAYIIKNLVDRPEEVRIKEVQGTHTIIYELSVAKPDIGKIIGKEGRTIKAIRTLLV
CHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHH
SVASRTNVRVSLEIMEEK
HHHCCCCEEEEEEEEECC
>Mature Secondary Structure
MKEFLAYIIKNLVDRPEEVRIKEVQGTHTIIYELSVAKPDIGKIIGKEGRTIKAIRTLLV
CHHHHHHHHHHHHCCCCCCEEEECCCCEEEEEEEECCCCCHHHHHCCCCCCHHHHHHHHH
SVASRTNVRVSLEIMEEK
HHHCCCCEEEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 12682364 [H]