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The map label for this gene is tsf

Identifier: 15836229

GI number: 15836229

Start: 781923

End: 782771

Strand: Direct

Name: tsf

Synonym: CPj0697

Alternate gene names: 15836229

Gene position: 781923-782771 (Clockwise)

Preceding gene: 15836228

Following gene: 15836230

Centisome position: 63.75

GC content: 39.93

Gene sequence:

>849_bases
ATGAGCGACTTTTCTATGGAGACCCTAAAAACATTAAGACAACAAACTGGTGTAGGGTTAACAAAGTGTAAGGAAGCTTT
AGAAGCTTGCGGTGGTAACCTAGAAGAAGCTGTTGTCTATTTACGTAAGTTGGGATTGGCATCTGCTGGGAAAAAAGAAC
ACAGAGAAACTAAAGAAGGCATCATAGCAGCTAAAACTGACGCCAACGGAGCCGCATTAATTGAAGTGAACGTAGAGACA
GATTTTGTTGCAAACAACGCAGTCTTTAGAGAATTTGTTTCCAATCTACTTAATGACATTCTCAAATACAAAGTAGATAC
CGTTGAAGCCCTATCGCAAGCAGCCTCGTCCCAAGATCCCTCTCTTTCTGTAGACGAACTCAGAGCAGTGACTATGCAGA
CTGTAGGAGAAAACATCCGTATTAGTAGAGTGGCATACTTTCCTAAGGCTACAAATTCTACTGTAGGAATTTATTCCCAT
GGCAACGGCAAGACAGTAGCTCTGACTATGCTTTCAGGCTCCTCTACTGCTGACAGCTTAGCAAAAGACATTGCAATGCA
TGTTGTTGCTGCTCAACCTCAATTCCTCAGTAAAGAAAGCGTTCCTGCTGAAGCTATTGCTAAAGAAAAAGAAGTGATTG
CTTCTCAAATTCAAGGAAAACCTCAAGAAGTTATTGAGAAGATCGTTACAGGAAAATTAAACACATTCTTCCAAGAAGCC
TGTTTATTAGAACAACCATTTATTAAGAACGCCGACCTTTCTATTCAAAGTTTAATAGATGATTTCTCCAAAACCTCTGG
AAGCTCTGTTGCAATAGAACAGTTCATTTTATGGAAAATAGGAGCCTAA

Upstream 100 bases:

>100_bases
CCGATCTCTCAGCTTTCGAATCTAGCCAAGATGACGAATCTGACGAAGAGAATCGAGAAGAAGATCTATTAGCAAAAAAA
TTTGATGGCGAGGCAAACTA

Downstream 100 bases:

>100_bases
TAAAAACATGGCTAAGCAAACTAGACGAGTCTTGTTTAAAATTTCTGGGGAAGCATTATCTAAAGATTCTAGCAATAGAA
TTGATGAAATGCGTTTATCC

Product: elongation factor Ts

Products: NA

Alternate protein names: EF-Ts [H]

Number of amino acids: Translated: 282; Mature: 281

Protein sequence:

>282_residues
MSDFSMETLKTLRQQTGVGLTKCKEALEACGGNLEEAVVYLRKLGLASAGKKEHRETKEGIIAAKTDANGAALIEVNVET
DFVANNAVFREFVSNLLNDILKYKVDTVEALSQAASSQDPSLSVDELRAVTMQTVGENIRISRVAYFPKATNSTVGIYSH
GNGKTVALTMLSGSSTADSLAKDIAMHVVAAQPQFLSKESVPAEAIAKEKEVIASQIQGKPQEVIEKIVTGKLNTFFQEA
CLLEQPFIKNADLSIQSLIDDFSKTSGSSVAIEQFILWKIGA

Sequences:

>Translated_282_residues
MSDFSMETLKTLRQQTGVGLTKCKEALEACGGNLEEAVVYLRKLGLASAGKKEHRETKEGIIAAKTDANGAALIEVNVET
DFVANNAVFREFVSNLLNDILKYKVDTVEALSQAASSQDPSLSVDELRAVTMQTVGENIRISRVAYFPKATNSTVGIYSH
GNGKTVALTMLSGSSTADSLAKDIAMHVVAAQPQFLSKESVPAEAIAKEKEVIASQIQGKPQEVIEKIVTGKLNTFFQEA
CLLEQPFIKNADLSIQSLIDDFSKTSGSSVAIEQFILWKIGA
>Mature_281_residues
SDFSMETLKTLRQQTGVGLTKCKEALEACGGNLEEAVVYLRKLGLASAGKKEHRETKEGIIAAKTDANGAALIEVNVETD
FVANNAVFREFVSNLLNDILKYKVDTVEALSQAASSQDPSLSVDELRAVTMQTVGENIRISRVAYFPKATNSTVGIYSHG
NGKTVALTMLSGSSTADSLAKDIAMHVVAAQPQFLSKESVPAEAIAKEKEVIASQIQGKPQEVIEKIVTGKLNTFFQEAC
LLEQPFIKNADLSIQSLIDDFSKTSGSSVAIEQFILWKIGA

Specific function: Associates with the EF-Tu.GDP complex and induces the exchange of GDP to GTP. It remains bound to the aminoacyl-tRNA.EF- Tu.GTP complex up to the GTP hydrolysis stage on the ribosome [H]

COG id: COG0264

COG function: function code J; Translation elongation factor Ts

Gene ontology:

Cell location: Cytoplasm [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the EF-Ts family [H]

Homologues:

Organism=Homo sapiens, GI171846268, Length=220, Percent_Identity=30.9090909090909, Blast_Score=92, Evalue=4e-19,
Organism=Homo sapiens, GI291084500, Length=241, Percent_Identity=29.045643153527, Blast_Score=86, Evalue=5e-17,
Organism=Homo sapiens, GI291084502, Length=93, Percent_Identity=44.0860215053763, Blast_Score=80, Evalue=2e-15,
Organism=Homo sapiens, GI291084498, Length=93, Percent_Identity=44.0860215053763, Blast_Score=80, Evalue=2e-15,
Organism=Escherichia coli, GI1786366, Length=285, Percent_Identity=33.6842105263158, Blast_Score=148, Evalue=5e-37,
Organism=Caenorhabditis elegans, GI17561440, Length=281, Percent_Identity=28.4697508896797, Blast_Score=89, Evalue=4e-18,
Organism=Drosophila melanogaster, GI19921466, Length=263, Percent_Identity=25.4752851711027, Blast_Score=70, Evalue=1e-12,

Paralogues:

None

Copy number: 2670 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1100 Molecules/Cell In: Stationary-Phase, Rich-Media (Based on E. coli). 4173 Molecules/Cell In: Growth Phase, Glucose-minimal MOPS Media. 14563 Molecules/Cell In: Growth Phase, Gluco

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001816
- InterPro:   IPR014039
- InterPro:   IPR018101
- InterPro:   IPR009060
- InterPro:   IPR000449 [H]

Pfam domain/function: PF00889 EF_TS; PF00627 UBA [H]

EC number: NA

Molecular weight: Translated: 30363; Mature: 30232

Theoretical pI: Translated: 5.06; Mature: 5.06

Prosite motif: PS01126 EF_TS_1 ; PS01127 EF_TS_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
1.4 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFSMETLKTLRQQTGVGLTKCKEALEACGGNLEEAVVYLRKLGLASAGKKEHRETKEG
CCCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCC
IIAAKTDANGAALIEVNVETDFVANNAVFREFVSNLLNDILKYKVDTVEALSQAASSQDP
EEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SLSVDELRAVTMQTVGENIRISRVAYFPKATNSTVGIYSHGNGKTVALTMLSGSSTADSL
CCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHH
AKDIAMHVVAAQPQFLSKESVPAEAIAKEKEVIASQIQGKPQEVIEKIVTGKLNTFFQEA
HHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHH
CLLEQPFIKNADLSIQSLIDDFSKTSGSSVAIEQFILWKIGA
HHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure 
SDFSMETLKTLRQQTGVGLTKCKEALEACGGNLEEAVVYLRKLGLASAGKKEHRETKEG
CCCHHHHHHHHHHHHCCCHHHHHHHHHHHCCCHHHHHHHHHHHCCCCCCCHHHHHHHCC
IIAAKTDANGAALIEVNVETDFVANNAVFREFVSNLLNDILKYKVDTVEALSQAASSQDP
EEEEEECCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
SLSVDELRAVTMQTVGENIRISRVAYFPKATNSTVGIYSHGNGKTVALTMLSGSSTADSL
CCCHHHHHHHHHHHCCCCCEEEEEEECCCCCCCEEEEEECCCCCEEEEEEECCCCCHHHH
AKDIAMHVVAAQPQFLSKESVPAEAIAKEKEVIASQIQGKPQEVIEKIVTGKLNTFFQEA
HHHHHHHHHHCCCHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHHHHHHHHCHHHHHHHHH
CLLEQPFIKNADLSIQSLIDDFSKTSGSSVAIEQFILWKIGA
HHHCCCCCCCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362 [H]