Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836045

GI number: 15836045

Start: 595049

End: 595843

Strand: Direct

Name: Not Available

Synonym: CPj0514

Alternate gene names: NA

Gene position: 595049-595843 (Clockwise)

Preceding gene: 15836044

Following gene: 161353804

Centisome position: 48.51

GC content: 45.53

Gene sequence:

>795_bases
ATGTCTAACCAACTCCAGCCATGTATAAGCTTAGGCTGCGTAAGTTATATTAATTCCTTTCCGCTGTCCCTACAACTCAT
AAAAAGAAACGATATTCGCTGTGTTCTTGCTCCCCCTGCAGACCTCCTCAACTTGCTAATCGAAGGGAAACTCGATGTTG
CTTTGACCTCATCCCTAGGAGCTATCTCTCATAACTTGGGGTATGTCCCCGGCTTTGGAATTGCAGCAAACCAACGTATC
CTCAGTGCAAACCTCTATGCAGCTCCCACTTTCTTTAACTCACCGCAACCTCGGATTGCCGCAACTTTAGAAAGTCGCTC
CTCTATAGGACTCTTAAAAGTGCTTTGTCGTCATCTCTGGCGCATCCCAACTCCTCATATCCTAAGATTCATAACTACAA
AAGTACTCAGACAAACCCCTGAAAATTATGATGGCCTCCTCCTAATCGGAGATGCAGCGCTACAACATCCTGTACTTCCT
GGATTTGTAACCTATGACCTTGCCTCGGGGTGGTATGATCTTACAAAGCTACCTTTTGTATTTGCTCTTCTTCTACACAG
CACCTCTTGGAAAGAACATCCCCTACCCAACCTTGCGATGGAAGAAGCCCTCCAACAGTTCGAATCTTCACCCGAAGAAG
TCCTTAAAGAAGCTCATCAACATACAGGTCTGCCCCCTTCTCTTCTTCAAGAATACTATGCCCTATGCCAGTACCGTCTA
GGAGAAGAACACTACGAAAGCTTTGAAAAATTCCGGGAATATTATGGAACCCTCTACCAACAAGCCCGACTGTAA

Upstream 100 bases:

>100_bases
ATATGGGGGAAAAGGTTTTCCAGATGGCCTCATCTAAAGAACCTATTAAAATGGACGCTGAGGGAATGGCGGCCCTCATC
ACACAACAAGGGAGAACGCC

Downstream 100 bases:

>100_bases
AAAGATCTTCGATTCCATAGCGAGTAAGTATGATCGCACAAATACAATACTCTCTTTAGGAATGCACCATTTCTGGAATC
GCTCTTTGATCCAGATCCTA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 264; Mature: 263

Protein sequence:

>264_residues
MSNQLQPCISLGCVSYINSFPLSLQLIKRNDIRCVLAPPADLLNLLIEGKLDVALTSSLGAISHNLGYVPGFGIAANQRI
LSANLYAAPTFFNSPQPRIAATLESRSSIGLLKVLCRHLWRIPTPHILRFITTKVLRQTPENYDGLLLIGDAALQHPVLP
GFVTYDLASGWYDLTKLPFVFALLLHSTSWKEHPLPNLAMEEALQQFESSPEEVLKEAHQHTGLPPSLLQEYYALCQYRL
GEEHYESFEKFREYYGTLYQQARL

Sequences:

>Translated_264_residues
MSNQLQPCISLGCVSYINSFPLSLQLIKRNDIRCVLAPPADLLNLLIEGKLDVALTSSLGAISHNLGYVPGFGIAANQRI
LSANLYAAPTFFNSPQPRIAATLESRSSIGLLKVLCRHLWRIPTPHILRFITTKVLRQTPENYDGLLLIGDAALQHPVLP
GFVTYDLASGWYDLTKLPFVFALLLHSTSWKEHPLPNLAMEEALQQFESSPEEVLKEAHQHTGLPPSLLQEYYALCQYRL
GEEHYESFEKFREYYGTLYQQARL
>Mature_263_residues
SNQLQPCISLGCVSYINSFPLSLQLIKRNDIRCVLAPPADLLNLLIEGKLDVALTSSLGAISHNLGYVPGFGIAANQRIL
SANLYAAPTFFNSPQPRIAATLESRSSIGLLKVLCRHLWRIPTPHILRFITTKVLRQTPENYDGLLLIGDAALQHPVLPG
FVTYDLASGWYDLTKLPFVFALLLHSTSWKEHPLPNLAMEEALQQFESSPEEVLKEAHQHTGLPPSLLQEYYALCQYRLG
EEHYESFEKFREYYGTLYQQARL

Specific function: Unknown

COG id: COG1427

COG function: function code R; Predicted periplasmic solute-binding protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 29724; Mature: 29592

Theoretical pI: Translated: 6.79; Mature: 6.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.9 %Cys     (Translated Protein)
0.8 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.9 %Cys     (Mature Protein)
0.4 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNQLQPCISLGCVSYINSFPLSLQLIKRNDIRCVLAPPADLLNLLIEGKLDVALTSSLG
CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHHHHCCCCCEEEHHHHH
AISHNLGYVPGFGIAANQRILSANLYAAPTFFNSPQPRIAATLESRSSIGLLKVLCRHLW
HHHHCCCCCCCCCCCCCCEEEECCCEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHH
RIPTPHILRFITTKVLRQTPENYDGLLLIGDAALQHPVLPGFVTYDLASGWYDLTKLPFV
CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCHHHHHHHCCHHHHHHHHHH
FALLLHSTSWKEHPLPNLAMEEALQQFESSPEEVLKEAHQHTGLPPSLLQEYYALCQYRL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GEEHYESFEKFREYYGTLYQQARL
CHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
SNQLQPCISLGCVSYINSFPLSLQLIKRNDIRCVLAPPADLLNLLIEGKLDVALTSSLG
CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHHHHCCCCCEEEHHHHH
AISHNLGYVPGFGIAANQRILSANLYAAPTFFNSPQPRIAATLESRSSIGLLKVLCRHLW
HHHHCCCCCCCCCCCCCCEEEECCCEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHH
RIPTPHILRFITTKVLRQTPENYDGLLLIGDAALQHPVLPGFVTYDLASGWYDLTKLPFV
CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCHHHHHHHCCHHHHHHHHHH
FALLLHSTSWKEHPLPNLAMEEALQQFESSPEEVLKEAHQHTGLPPSLLQEYYALCQYRL
HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC
GEEHYESFEKFREYYGTLYQQARL
CHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA