| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15836045
GI number: 15836045
Start: 595049
End: 595843
Strand: Direct
Name: Not Available
Synonym: CPj0514
Alternate gene names: NA
Gene position: 595049-595843 (Clockwise)
Preceding gene: 15836044
Following gene: 161353804
Centisome position: 48.51
GC content: 45.53
Gene sequence:
>795_bases ATGTCTAACCAACTCCAGCCATGTATAAGCTTAGGCTGCGTAAGTTATATTAATTCCTTTCCGCTGTCCCTACAACTCAT AAAAAGAAACGATATTCGCTGTGTTCTTGCTCCCCCTGCAGACCTCCTCAACTTGCTAATCGAAGGGAAACTCGATGTTG CTTTGACCTCATCCCTAGGAGCTATCTCTCATAACTTGGGGTATGTCCCCGGCTTTGGAATTGCAGCAAACCAACGTATC CTCAGTGCAAACCTCTATGCAGCTCCCACTTTCTTTAACTCACCGCAACCTCGGATTGCCGCAACTTTAGAAAGTCGCTC CTCTATAGGACTCTTAAAAGTGCTTTGTCGTCATCTCTGGCGCATCCCAACTCCTCATATCCTAAGATTCATAACTACAA AAGTACTCAGACAAACCCCTGAAAATTATGATGGCCTCCTCCTAATCGGAGATGCAGCGCTACAACATCCTGTACTTCCT GGATTTGTAACCTATGACCTTGCCTCGGGGTGGTATGATCTTACAAAGCTACCTTTTGTATTTGCTCTTCTTCTACACAG CACCTCTTGGAAAGAACATCCCCTACCCAACCTTGCGATGGAAGAAGCCCTCCAACAGTTCGAATCTTCACCCGAAGAAG TCCTTAAAGAAGCTCATCAACATACAGGTCTGCCCCCTTCTCTTCTTCAAGAATACTATGCCCTATGCCAGTACCGTCTA GGAGAAGAACACTACGAAAGCTTTGAAAAATTCCGGGAATATTATGGAACCCTCTACCAACAAGCCCGACTGTAA
Upstream 100 bases:
>100_bases ATATGGGGGAAAAGGTTTTCCAGATGGCCTCATCTAAAGAACCTATTAAAATGGACGCTGAGGGAATGGCGGCCCTCATC ACACAACAAGGGAGAACGCC
Downstream 100 bases:
>100_bases AAAGATCTTCGATTCCATAGCGAGTAAGTATGATCGCACAAATACAATACTCTCTTTAGGAATGCACCATTTCTGGAATC GCTCTTTGATCCAGATCCTA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 264; Mature: 263
Protein sequence:
>264_residues MSNQLQPCISLGCVSYINSFPLSLQLIKRNDIRCVLAPPADLLNLLIEGKLDVALTSSLGAISHNLGYVPGFGIAANQRI LSANLYAAPTFFNSPQPRIAATLESRSSIGLLKVLCRHLWRIPTPHILRFITTKVLRQTPENYDGLLLIGDAALQHPVLP GFVTYDLASGWYDLTKLPFVFALLLHSTSWKEHPLPNLAMEEALQQFESSPEEVLKEAHQHTGLPPSLLQEYYALCQYRL GEEHYESFEKFREYYGTLYQQARL
Sequences:
>Translated_264_residues MSNQLQPCISLGCVSYINSFPLSLQLIKRNDIRCVLAPPADLLNLLIEGKLDVALTSSLGAISHNLGYVPGFGIAANQRI LSANLYAAPTFFNSPQPRIAATLESRSSIGLLKVLCRHLWRIPTPHILRFITTKVLRQTPENYDGLLLIGDAALQHPVLP GFVTYDLASGWYDLTKLPFVFALLLHSTSWKEHPLPNLAMEEALQQFESSPEEVLKEAHQHTGLPPSLLQEYYALCQYRL GEEHYESFEKFREYYGTLYQQARL >Mature_263_residues SNQLQPCISLGCVSYINSFPLSLQLIKRNDIRCVLAPPADLLNLLIEGKLDVALTSSLGAISHNLGYVPGFGIAANQRIL SANLYAAPTFFNSPQPRIAATLESRSSIGLLKVLCRHLWRIPTPHILRFITTKVLRQTPENYDGLLLIGDAALQHPVLPG FVTYDLASGWYDLTKLPFVFALLLHSTSWKEHPLPNLAMEEALQQFESSPEEVLKEAHQHTGLPPSLLQEYYALCQYRLG EEHYESFEKFREYYGTLYQQARL
Specific function: Unknown
COG id: COG1427
COG function: function code R; Predicted periplasmic solute-binding protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 29724; Mature: 29592
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 0.4 %Met (Mature Protein) 2.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSNQLQPCISLGCVSYINSFPLSLQLIKRNDIRCVLAPPADLLNLLIEGKLDVALTSSLG CCCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHHHHCCCCCEEEHHHHH AISHNLGYVPGFGIAANQRILSANLYAAPTFFNSPQPRIAATLESRSSIGLLKVLCRHLW HHHHCCCCCCCCCCCCCCEEEECCCEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHH RIPTPHILRFITTKVLRQTPENYDGLLLIGDAALQHPVLPGFVTYDLASGWYDLTKLPFV CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCHHHHHHHCCHHHHHHHHHH FALLLHSTSWKEHPLPNLAMEEALQQFESSPEEVLKEAHQHTGLPPSLLQEYYALCQYRL HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GEEHYESFEKFREYYGTLYQQARL CHHHHHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure SNQLQPCISLGCVSYINSFPLSLQLIKRNDIRCVLAPPADLLNLLIEGKLDVALTSSLG CCCHHHHHHHHHHHHHHCCCCEEEEEECCCCEEEECCCHHHHHHHHCCCCCEEEHHHHH AISHNLGYVPGFGIAANQRILSANLYAAPTFFNSPQPRIAATLESRSSIGLLKVLCRHLW HHHHCCCCCCCCCCCCCCEEEECCCEECCCCCCCCCCHHHHHHHCCCCCCHHHHHHHHHH RIPTPHILRFITTKVLRQTPENYDGLLLIGDAALQHPVLPGFVTYDLASGWYDLTKLPFV CCCCHHHHHHHHHHHHHHCCCCCCCEEEEECHHHCCCCCCCHHHHHHHCCHHHHHHHHHH FALLLHSTSWKEHPLPNLAMEEALQQFESSPEEVLKEAHQHTGLPPSLLQEYYALCQYRL HHHHHHCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHC GEEHYESFEKFREYYGTLYQQARL CHHHHHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA