Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15836027

GI number: 15836027

Start: 576112

End: 577134

Strand: Direct

Name: Not Available

Synonym: CPj0496

Alternate gene names: NA

Gene position: 576112-577134 (Clockwise)

Preceding gene: 15836026

Following gene: 15836031

Centisome position: 46.97

GC content: 40.86

Gene sequence:

>1023_bases
ATGACAATTCTACGTAAACTCTCTCAGTACTTATTTTTCTTTTCTCTGTTTTGCTCTTTCATCTATGTAGCCACTTGTGG
TTCTCAACCAGATAGCGTCTCCTCTCCTAAAATCGCAATTTTCTTATCCTTTCCCCATCCCCTATTAGAAGATTGCAGTA
AAAGCTGTATAGAAACCTTGAAAGATTTTGAGAACCTTCCTGAAATTGTTGTCCTAAATGCTGAAGACAGTATCGTAAAG
GCTAGGAAAATTGCTCGCTCCTTACATACCGATAAAAATGTCGTGGCGATTGTCACCTTAGGAACTATTGCTACGAAGGT
CATGAGCCACATTGAAACACAGAAACCTGTGATCTATGCCGCTGTTCCTGATCGCGAAAGCCTAACCCCTCCTAAAAACA
CAATGAATATCTACGGAGTGAATGACACTCTAGACATCAATCAATACTGCTTTGCTATACAAGCCGTAGCTACCAATGCA
CAATCTATCGTGTATTTAAAACCCTCCGAACCTTTCCCCTCAGATCTCCAAAAAGAAATTGTTAAGAAACTCCATGCTTC
AGGAATTGAGGTCATTGAGATCTCTATTACAAGCAGTACATTCAAAACCCGGATACGCCAGGCTATCGACAAGCGCCCCT
CAGCTATCTTCATTCCCCTCTCCCCACTTTCTCATAAAGAAGGCACCGCATTCCTTCAGGAAATCCTCAAAGAGAAAATC
CCTATCATTACCGACGATACCTCCTTAATTTCCGAAGGAGCCTGCATTGCCTGTAGCGTGGATTACAAAAAATCAGGAAA
ACAAATCGCAAAAATTGTGCACCACCTACTCTATAACAATCACGATGTGGACAGCCTGCGTAAAATCATTGCTCAACGCC
TGTCACCTACAACCACCTTTAATGAAGATATCATCAAGTACTTAGGAATCAAGCTTCATAAAACAGAACGCAACCAGTTC
TTATCTTTTAAAAGCAAAAAATTGGAAAAATCTGAGAAAGGGAAAAACGTAGCTGTGAGTTAG

Upstream 100 bases:

>100_bases
AAGGATTTGTTCGTTTCTCCGCTCTGACACAACCACAAAATATCGCTTTAGCCTGTGACCGCCTCTGTACCGCTTCACTA
AAAGAAACGATGGTTCTTGC

Downstream 100 bases:

>100_bases
GCTATACGTCTATATGCAAAGAAAAAATAATGTCTTGAACTCTGTTAGGAAGAAGAAACTTTTTCTTTCGAGAAGTTTCT
CCTGCAATTAAAGTGACATC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 340; Mature: 339

Protein sequence:

>340_residues
MTILRKLSQYLFFFSLFCSFIYVATCGSQPDSVSSPKIAIFLSFPHPLLEDCSKSCIETLKDFENLPEIVVLNAEDSIVK
ARKIARSLHTDKNVVAIVTLGTIATKVMSHIETQKPVIYAAVPDRESLTPPKNTMNIYGVNDTLDINQYCFAIQAVATNA
QSIVYLKPSEPFPSDLQKEIVKKLHASGIEVIEISITSSTFKTRIRQAIDKRPSAIFIPLSPLSHKEGTAFLQEILKEKI
PIITDDTSLISEGACIACSVDYKKSGKQIAKIVHHLLYNNHDVDSLRKIIAQRLSPTTTFNEDIIKYLGIKLHKTERNQF
LSFKSKKLEKSEKGKNVAVS

Sequences:

>Translated_340_residues
MTILRKLSQYLFFFSLFCSFIYVATCGSQPDSVSSPKIAIFLSFPHPLLEDCSKSCIETLKDFENLPEIVVLNAEDSIVK
ARKIARSLHTDKNVVAIVTLGTIATKVMSHIETQKPVIYAAVPDRESLTPPKNTMNIYGVNDTLDINQYCFAIQAVATNA
QSIVYLKPSEPFPSDLQKEIVKKLHASGIEVIEISITSSTFKTRIRQAIDKRPSAIFIPLSPLSHKEGTAFLQEILKEKI
PIITDDTSLISEGACIACSVDYKKSGKQIAKIVHHLLYNNHDVDSLRKIIAQRLSPTTTFNEDIIKYLGIKLHKTERNQF
LSFKSKKLEKSEKGKNVAVS
>Mature_339_residues
TILRKLSQYLFFFSLFCSFIYVATCGSQPDSVSSPKIAIFLSFPHPLLEDCSKSCIETLKDFENLPEIVVLNAEDSIVKA
RKIARSLHTDKNVVAIVTLGTIATKVMSHIETQKPVIYAAVPDRESLTPPKNTMNIYGVNDTLDINQYCFAIQAVATNAQ
SIVYLKPSEPFPSDLQKEIVKKLHASGIEVIEISITSSTFKTRIRQAIDKRPSAIFIPLSPLSHKEGTAFLQEILKEKIP
IITDDTSLISEGACIACSVDYKKSGKQIAKIVHHLLYNNHDVDSLRKIIAQRLSPTTTFNEDIIKYLGIKLHKTERNQFL
SFKSKKLEKSEKGKNVAVS

Specific function: Unknown

COG id: COG2984

COG function: function code R; ABC-type uncharacterized transport system, periplasmic component

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37989; Mature: 37857

Theoretical pI: Translated: 9.13; Mature: 9.13

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTILRKLSQYLFFFSLFCSFIYVATCGSQPDSVSSPKIAIFLSFPHPLLEDCSKSCIETL
CHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
KDFENLPEIVVLNAEDSIVKARKIARSLHTDKNVVAIVTLGTIATKVMSHIETQKPVIYA
HHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEE
AVPDRESLTPPKNTMNIYGVNDTLDINQYCFAIQAVATNAQSIVYLKPSEPFPSDLQKEI
ECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH
VKKLHASGIEVIEISITSSTFKTRIRQAIDKRPSAIFIPLSPLSHKEGTAFLQEILKEKI
HHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCC
PIITDDTSLISEGACIACSVDYKKSGKQIAKIVHHLLYNNHDVDSLRKIIAQRLSPTTTF
CEEECCHHHHHCCCEEEEECCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
NEDIIKYLGIKLHKTERNQFLSFKSKKLEKSEKGKNVAVS
HHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCC
>Mature Secondary Structure 
TILRKLSQYLFFFSLFCSFIYVATCGSQPDSVSSPKIAIFLSFPHPLLEDCSKSCIETL
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEECCCHHHHHHHHHHHHHH
KDFENLPEIVVLNAEDSIVKARKIARSLHTDKNVVAIVTLGTIATKVMSHIETQKPVIYA
HHHHCCCCEEEECCCHHHHHHHHHHHHHCCCCCEEEEEEHHHHHHHHHHHHHCCCCEEEE
AVPDRESLTPPKNTMNIYGVNDTLDINQYCFAIQAVATNAQSIVYLKPSEPFPSDLQKEI
ECCCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHHCCCCEEEEECCCCCCCHHHHHHH
VKKLHASGIEVIEISITSSTFKTRIRQAIDKRPSAIFIPLSPLSHKEGTAFLQEILKEKI
HHHHHHCCCEEEEEEECHHHHHHHHHHHHHCCCCEEEEECCCCCCCCHHHHHHHHHHHCC
PIITDDTSLISEGACIACSVDYKKSGKQIAKIVHHLLYNNHDVDSLRKIIAQRLSPTTTF
CEEECCHHHHHCCCEEEEECCHHHCHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCCCCC
NEDIIKYLGIKLHKTERNQFLSFKSKKLEKSEKGKNVAVS
HHHHHHHHCCEEEECHHHHHHHHHHHHHHHHHCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA