Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835888

GI number: 15835888

Start: 398296

End: 399597

Strand: Reverse

Name: Not Available

Synonym: CPj0355

Alternate gene names: NA

Gene position: 399597-398296 (Counterclockwise)

Preceding gene: 15835889

Following gene: 15835882

Centisome position: 32.58

GC content: 39.02

Gene sequence:

>1302_bases
ATGAGCATGACGATCGTTCCACATGCTTTATTTAAAAATCATTGCGAGTGTCATTCTACCTTTCCTTTGAGTTCAAGGAC
TATTGTAAGAATAGCCATTGCCAGCCTCTTTTGTATAGGTGCATTAGCAGCTTTAGGCTGTTTGGCTCCTCCCGTTTCTT
ATATTGTTGGGAGTGTTTTAGCTTTTATTGCCTTTGTCATTCTTTCTTTAGTAATTTTAGCTTTGATTTTTGGAGAGAAG
AAGCTTCCACCAACACCAAGAATCATTCCTGATAGATTTACTCACGTGATAGATGAAGCTTATGGCCTTTCAATCTCTGC
ATTTGTAAGAGAACAGCAGGTAACATTAGCCGAGTTTAGACAATTTTCTACTGCCCTGTTGTGTAACATATCTCCTGAAG
AGAAAATCAAACAATTGCCTTCTGAATTGCGAAGTAAAGTAGAGAGTTTTGGTATTAGCAGGCTCGCAGGTGATTTAGAA
AAGAATAATTGGCCAATATTTGAAGATCTTTTAAGCCAAACCTGCCCGTTATATTGGCTTCAGACATTTATATCAGCAGG
AGATCCACAAGTTTGTAGAGACCTAGGTGTCCCTAGAGAATGTTATGGGTACTATTGGCTAGGGCCTTTGGGATACAGTA
CAGCTAAGGCTACAATTTTTTGTAAAGAGACGCATCATATTCTTCAACAATTAACGAAAGAGGACGTTCTTTTATTAAAA
AACAAGGCTCTTCAAGAGAAATGGGATACTGATGAAGTCAAAGCAATTGTAGAGCGTATCTACACTACCTATACGGCACG
AGGAACTCTAAAGACCGAAGCAGGGGGACTTACAAAAGAGACAATCAGTAAGGAATTGCTATTGTTGAGCTTGCATGGCT
ATTCTTTTGATCAGCTACAGCTGATCACTCAACTTCCTAGAGATGCTTGGGATTGGCTGTGTTTTGTAGATAACAGTACC
GCATACAACCTTCAGCTTTGTGCTCTTGTAGGAGCTTTGTCATCCCAAAATCTTCTTGACGAATCTTCTATCGATTTTGA
TGTAAACCTAGGCCTGTATGTGATTCAGGATCTAAAAGAAGCTGTTCAAGCATTTTCTGCTTCTGATGAGCCAAAGAAAG
AACTAGGTAAATTCTTGTTAAGGCATTTGAGTTCAGTTTCTAAGCGATTAGAGAGTGTATTAAGACAGGGTCTTCACAGA
ATAGCTCTAGAGCATGGAAATGCCAGAGCTAGGGTTTATGACGTCAATTTTGTAACAGGAGCTAGAATTCATAGGAAGAC
GAGTATCTTCTTTAAAGACTAA

Upstream 100 bases:

>100_bases
TTCATGGGATTTTTTATTACAGGAAATTCTTGAATTAGAGATTTTTTATTTACGCATAATCTATACTGCCTTCAATAGAT
CTATATCTAAGGAGTTGGCT

Downstream 100 bases:

>100_bases
ACCAGGTAACTAGCTTTTTAGTCTCGAAAGGGGCTACGAGAGGGAGTAGAATTTTTCTTATTCCAAAATAGAAATCTCTA
ACCTATCAGCAGGGAGGACT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 433; Mature: 432

Protein sequence:

>433_residues
MSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVLAFIAFVILSLVILALIFGEK
KLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLE
KNNWPIFEDLLSQTCPLYWLQTFISAGDPQVCRDLGVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLLLK
NKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQLITQLPRDAWDWLCFVDNST
AYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHR
IALEHGNARARVYDVNFVTGARIHRKTSIFFKD

Sequences:

>Translated_433_residues
MSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVLAFIAFVILSLVILALIFGEK
KLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLE
KNNWPIFEDLLSQTCPLYWLQTFISAGDPQVCRDLGVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLLLK
NKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQLITQLPRDAWDWLCFVDNST
AYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHR
IALEHGNARARVYDVNFVTGARIHRKTSIFFKD
>Mature_432_residues
SMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVLAFIAFVILSLVILALIFGEKK
LPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFRQFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLEK
NNWPIFEDLLSQTCPLYWLQTFISAGDPQVCRDLGVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLLLKN
KALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQLITQLPRDAWDWLCFVDNSTA
YNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKEAVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHRI
ALEHGNARARVYDVNFVTGARIHRKTSIFFKD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 48592; Mature: 48461

Theoretical pI: Translated: 7.26; Mature: 7.26

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.5 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
2.5 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVL
CCCEECCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AFIAFVILSLVILALIFGEKKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLEKNNWPIFEDLLSQTCPLYWL
HHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHH
QTFISAGDPQVCRDLGVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLLLK
HHHHCCCCHHHHHHCCCCHHHCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
NKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQ
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHEEEEECCCCHHHHH
LITQLPRDAWDWLCFVDNSTAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKE
HHHHCCHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHH
AVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHRIALEHGNARARVYDVNFVTG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECC
ARIHRKTSIFFKD
CHHHHCCEEEECC
>Mature Secondary Structure 
SMTIVPHALFKNHCECHSTFPLSSRTIVRIAIASLFCIGALAALGCLAPPVSYIVGSVL
CCEECCHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
AFIAFVILSLVILALIFGEKKLPPTPRIIPDRFTHVIDEAYGLSISAFVREQQVTLAEFR
HHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
QFSTALLCNISPEEKIKQLPSELRSKVESFGISRLAGDLEKNNWPIFEDLLSQTCPLYWL
HHHHHHEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHCCCHHHHH
QTFISAGDPQVCRDLGVPRECYGYYWLGPLGYSTAKATIFCKETHHILQQLTKEDVLLLK
HHHHCCCCHHHHHHCCCCHHHCCEEEECCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHH
NKALQEKWDTDEVKAIVERIYTTYTARGTLKTEAGGLTKETISKELLLLSLHGYSFDQLQ
HHHHHHCCCHHHHHHHHHHHHHHHHCCCCEECCCCCCCHHHHHHHHEEEEECCCCHHHHH
LITQLPRDAWDWLCFVDNSTAYNLQLCALVGALSSQNLLDESSIDFDVNLGLYVIQDLKE
HHHHCCHHHHCEEEEECCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEECCHHHHHHHHHH
AVQAFSASDEPKKELGKFLLRHLSSVSKRLESVLRQGLHRIALEHGNARARVYDVNFVTG
HHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEEEECC
ARIHRKTSIFFKD
CHHHHCCEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA