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The map label for this gene is ytgA

Identifier: 15835882

GI number: 15835882

Start: 391410

End: 392393

Strand: Reverse

Name: ytgA

Synonym: CPj0348

Alternate gene names: NA

Gene position: 392393-391410 (Counterclockwise)

Preceding gene: 15835888

Following gene: 15835881

Centisome position: 31.99

GC content: 40.04

Gene sequence:

>984_bases
ATGGATGCGAAAATGGGATATATATTTAAAGTGATGCGTTGGATTTTCTGTTTCGTGGCATGTGGTATAACTTTTGGATG
TACCAATTCTGGGTTTCAGAATGCAAATTCACGTCCTTGTATACTATCCATGAATCGCATGATTCATGATTGTGTTGAAA
GAGTCGTGGGGAATAGGCTTGCTACCGCTGTTTTGATCAAAGGATCCTTAGACCCTCATGCGTATGAGATGGTTAAAGGG
GATAAGGACAAGATTGCTGGAAGTGCCGTAATTTTTTGTAACGGCCTGGGTCTTGAGCATACATTAAGTTTGCGGAAGCA
TTTAGAAAATAATCCCAATAGTGTCAAGTTAGGGGAGCGGTTGATAGCGCGTGGGGCCTTTGTTCCTCTAGAAGAAGACG
GTATTTGCGATCCTCATATCTGGATGGATCTTTCTATTTGGAAGGAAGCTGTCATAGAAATTACAGAAGTTCTCATTGAA
AAGTTCCCTGAATGGTCTGCTGAATTTAAAGCAAATAGTGAGGAACTTGTTTGTGAAATGTCTATTTTAGATTCTTGGGC
GAAACAATGCTTGAGCACAATTCCTGAAAATTTACGGTATCTTGTCTCAGGTCATAATGCGTTCAGTTACTTTACACGTC
GCTATTTAGCTACTCCTGAAGAAGTGGCTTCCGGAGCATGGAGGTCTCGTTGTATTTCTCCTGAGGGTCTATCTCCAGAA
GCTCAAATCAGTGTTCGTGATATTATGGCGGTTGTAGATTATATTAATGAGCATGATGTCAGTGTGGTTTTCCCTGAGGA
TACTCTGAACCAAGATGCGTTGAAAAAAATTGTTTCTTCTCTGAAGAAAAGTCATTTAGTTCGTCTAGCTCAAAAACCAT
TGTATAGTGATAATGTGGACGACAATTATTTTAGCACCTTTAAACATAATGTCTGCCTTATCACAGAAGAATTAGGAGGG
GTGGCTCTTGAATGTCAAAGATGA

Upstream 100 bases:

>100_bases
AAAAATGTAAATAATAAATCTTTTAGATCGGGTTATAGCTTTGATGTTTGGTGGTTCGTTAAGTGGTTTTTAATGGATCT
TAAAAAATGCTTCTAGAGAG

Downstream 100 bases:

>100_bases
GACTTTTTGGTCTGTACACAACCTTTGTGTAAACTATGAGCATGCAGCCGTTCTTTATCACATATCCTTTTCCTTGGGAA
AGGGGTCATTAACTGCTATT

Product: solute-binding family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MDAKMGYIFKVMRWIFCFVACGITFGCTNSGFQNANSRPCILSMNRMIHDCVERVVGNRLATAVLIKGSLDPHAYEMVKG
DKDKIAGSAVIFCNGLGLEHTLSLRKHLENNPNSVKLGERLIARGAFVPLEEDGICDPHIWMDLSIWKEAVIEITEVLIE
KFPEWSAEFKANSEELVCEMSILDSWAKQCLSTIPENLRYLVSGHNAFSYFTRRYLATPEEVASGAWRSRCISPEGLSPE
AQISVRDIMAVVDYINEHDVSVVFPEDTLNQDALKKIVSSLKKSHLVRLAQKPLYSDNVDDNYFSTFKHNVCLITEELGG
VALECQR

Sequences:

>Translated_327_residues
MDAKMGYIFKVMRWIFCFVACGITFGCTNSGFQNANSRPCILSMNRMIHDCVERVVGNRLATAVLIKGSLDPHAYEMVKG
DKDKIAGSAVIFCNGLGLEHTLSLRKHLENNPNSVKLGERLIARGAFVPLEEDGICDPHIWMDLSIWKEAVIEITEVLIE
KFPEWSAEFKANSEELVCEMSILDSWAKQCLSTIPENLRYLVSGHNAFSYFTRRYLATPEEVASGAWRSRCISPEGLSPE
AQISVRDIMAVVDYINEHDVSVVFPEDTLNQDALKKIVSSLKKSHLVRLAQKPLYSDNVDDNYFSTFKHNVCLITEELGG
VALECQR
>Mature_327_residues
MDAKMGYIFKVMRWIFCFVACGITFGCTNSGFQNANSRPCILSMNRMIHDCVERVVGNRLATAVLIKGSLDPHAYEMVKG
DKDKIAGSAVIFCNGLGLEHTLSLRKHLENNPNSVKLGERLIARGAFVPLEEDGICDPHIWMDLSIWKEAVIEITEVLIE
KFPEWSAEFKANSEELVCEMSILDSWAKQCLSTIPENLRYLVSGHNAFSYFTRRYLATPEEVASGAWRSRCISPEGLSPE
AQISVRDIMAVVDYINEHDVSVVFPEDTLNQDALKKIVSSLKKSHLVRLAQKPLYSDNVDDNYFSTFKHNVCLITEELGG
VALECQR

Specific function: Part of an ATP-driven transport system CPn_0346/CPn_0347/CPn_0348/CPn_0349 for a metal. Metal-binding component

COG id: COG0803

COG function: function code P; ABC-type metal ion transport system, periplasmic component/surface adhesin

Gene ontology:

Cell location: Cell membrane; Lipid-anchor (Probable)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial solute-binding protein 9 family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y349_CHLPN (Q9Z8J4)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   C72089
- PIR:   C86534
- RefSeq:   NP_224549.1
- RefSeq:   NP_300406.1
- RefSeq:   NP_444960.1
- RefSeq:   NP_876630.1
- ProteinModelPortal:   Q9Z8J4
- SMR:   Q9Z8J4
- GeneID:   1467037
- GeneID:   895196
- GeneID:   919121
- GeneID:   962822
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0411
- KEGG:   cpn:CPn0349
- KEGG:   cpt:CpB0356
- TIGR:   CP_0411
- HOGENOM:   HBG413933
- OMA:   FSDAMGA
- PhylomeDB:   Q9Z8J4
- ProtClustDB:   CLSK871163
- BioCyc:   CPNE115711:CP_0411-MONOMER
- BioCyc:   CPNE115713:CPN0349-MONOMER
- BioCyc:   CPNE138677:CPJ0348-MONOMER
- BioCyc:   CPNE182082:CPB0356-MONOMER
- InterPro:   IPR006127
- InterPro:   IPR006129
- InterPro:   IPR006128
- PRINTS:   PR00691
- PRINTS:   PR00690

Pfam domain/function: PF01297 SBP_bac_9

EC number: NA

Molecular weight: Translated: 36761; Mature: 36761

Theoretical pI: Translated: 5.63; Mature: 5.63

Prosite motif: PS51257 PROKAR_LIPOPROTEIN; PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.7 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
6.4 %Cys+Met (Translated Protein)
3.7 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
6.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDAKMGYIFKVMRWIFCFVACGITFGCTNSGFQNANSRPCILSMNRMIHDCVERVVGNRL
CCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCHH
ATAVLIKGSLDPHAYEMVKGDKDKIAGSAVIFCNGLGLEHTLSLRKHLENNPNSVKLGER
HHHHEEECCCCHHHHHHHCCCHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHH
LIARGAFVPLEEDGICDPHIWMDLSIWKEAVIEITEVLIEKFPEWSAEFKANSEELVCEM
HHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHH
SILDSWAKQCLSTIPENLRYLVSGHNAFSYFTRRYLATPEEVASGAWRSRCISPEGLSPE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCHHHHHCCCCCCCCCC
AQISVRDIMAVVDYINEHDVSVVFPEDTLNQDALKKIVSSLKKSHLVRLAQKPLYSDNVD
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DNYFSTFKHNVCLITEELGGVALECQR
CHHHHHHCCCEEEEEECCCCEEEEECC
>Mature Secondary Structure
MDAKMGYIFKVMRWIFCFVACGITFGCTNSGFQNANSRPCILSMNRMIHDCVERVVGNRL
CCCCHHHHHHHHHHHHHHHHHCCEECCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHCCHH
ATAVLIKGSLDPHAYEMVKGDKDKIAGSAVIFCNGLGLEHTLSLRKHLENNPNSVKLGER
HHHHEEECCCCHHHHHHHCCCHHHHCCCEEEEEECCCHHHHHHHHHHHCCCCCCCHHHHH
LIARGAFVPLEEDGICDPHIWMDLSIWKEAVIEITEVLIEKFPEWSAEFKANSEELVCEM
HHHCCCCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHHHHHHCCCCCHHHCCCCHHHHHHH
SILDSWAKQCLSTIPENLRYLVSGHNAFSYFTRRYLATPEEVASGAWRSRCISPEGLSPE
HHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCCHHHHHCCHHHHHCCCCCCCCCC
AQISVRDIMAVVDYINEHDVSVVFPEDTLNQDALKKIVSSLKKSHLVRLAQKPLYSDNVD
HHHHHHHHHHHHHHHCCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
DNYFSTFKHNVCLITEELGGVALECQR
CHHHHHHCCCEEEEEECCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362