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The map label for this gene is 60IM

Identifier: 15835845

GI number: 15835845

Start: 350668

End: 353055

Strand: Reverse

Name: 60IM

Synonym: CPj0310

Alternate gene names: 15835845

Gene position: 353055-350668 (Counterclockwise)

Preceding gene: 15835846

Following gene: 15835844

Centisome position: 28.78

GC content: 37.31

Gene sequence:

>2388_bases
ATGAATAAACGCACTTTGCTTTTTGTTTCTTTAATTGGGATTGCTTTTGTAGGATGTCAAATATTTTTTGGTTATAATGA
ATTTCGTTCCTGCAAAAATCTAGCAGAGAAACAAAGAAAGATTTCAGAACAGACGCTAGCTGCAGTAGAATCTGTAGGGT
TAAGTGTAGCTTCATGGGACACCGATGTAAACGGAGAAGAACATAAGAATAACTACGCAGTTCGTGTTGGAGACAAGTTA
TTTTTATTACATAATGGAGAAGCTGCTCAGTCTGTTTATTCTTCTGGGGAATCTTGGAGCTTTGTAGATCACAAGTGTGG
TTTCGATAATATTCACTTGGCTTTATATCGTCAGCAGGGTTCCTCTTTCAATCCTACGAATACGGGAAAAGTTTTTCTTC
CTACGAATCATGAAGGTTTACCTGTACTAGTTGTTGAGTTTCGTAACAATAAAGAGCCTTTAGTATTTCTAGGTGAGTAC
GCACAAGGAAGAATTTCCAATAAAGATAGCACGATCTTTGGTACAGCGCTTGTCTTTTGGAGATCAGGAAGCGACTATAT
TCCTTTAGGTCTCTATGATTCTCGAGAAGAAAAGTTAGTTTCTTTGGATCTTCCTATTACACGAGCTGTAATTTTTGGTA
ATGACCAAGATTCGGCAAAGTCGTCAGATACTGCGAACCACTATGTTTTATTTAATGATTACATGCAGATTATTGTTTCT
GAAGAGAGTGGTTCTATAGAAGGTATCAATTTACCTTTTGCTTCAACAAATAATAAAAGCATTGTGAATGAAATTGGTTT
TGATAGGGATTTAGCTTCAGAGAAATCTCCTGAAGCTCTTTTCCCTGGGCTGTCTTCAAAACTTCCTGATGGCCAACAAG
CCAAAAACTCGATTGGAGGTTACTACCCTTTATTGCGCAGGGGATTATTAAGTGATTCTAAGAAATTACTTCCTCTAGAG
TATCACGCATTAAATGTGGTTTCAGGAAGAGAGCTAGCGACTCCTGTGGCTTTAAGATACCGAGTTCTTTCCTATACCCC
CCATTCCATTCAATTGGAAAGCTTAGATAGATCGGTTCAGAAGGTATACAAACTTCCAGAGAATCCGGAAGAAAAGCCCT
ATGTTTTTGAAACTGCAATTACTTTAACGAAAGAAACCGAAGATGTATGGGTAACTTCAGGAGTTCCTGAAGTGGAGATC
ATGTCAAATGCTTCAGCCCCAACCATTAAATACAGGGTTATCAAAAAAAATAAGGGGTCTTTAGATAAAGTTAAGCTTCC
AAAAGTAAAAGAGCCTTTAGCTGTACGTCGTGGTGTTTATCCTCAATGGATTTTAAATTCGAATGGATATTTCGGTATTA
TTTTAACTCCGTTGTCTGAAATTGCTTCTGGCTATGGATCTCTCTACATTTCGGGTTCTACGGCTCCGACAAGATTGTCT
GCTATTTCTCCTAAAAATCAACTGTATCCAGTATCAAAATATCCTGGATATGAGACCTTGCTTCCTTTGCCAAAAGATGC
AGGGACACATCGATTTTTAGTGTATGCAGGTCCCTTGGCAGAGCCTACACTTAAAGTATTAGATAAGACAATTACTCAGG
AGAAGGGAGAAAATCCTGAGTATCTTGATAGCATTTCTTTCCGTGGTGTTTTTGCATTTATTACAGCTCCTTTTGCAGCA
CTCCTATTTATTATTATGAAGTTCTTCAAATTGGTTACGGGTTCTTGGGGAATTTCCATTATTTTACTTACTGTATTTTT
GAAATTGCTTCTCTATCCTTTAAATGCATGGTCCATACGATCTATGAGGCGTATGCAGATTTTATCTCCTTATATTCAGC
AAATTCAGCAAAAGTATAAGAACGAACCTAAGCGTGCTCAGATGGAAATCATGGGCTTGTATAAGACAAACAAAGTGAAT
CCTATCACGGGTTGTTTACCTTTATTGATACAGCTTCCTTTCCTAATTGCGATGTTTGATTTATTAAAGTCATCATTCTT
ATTACGAGGAGCCTCGTTTATTCCTGGGTGGATTGATAACTTAACAGCTCCTGATGTGTTGTTTTCTTGGCAGACATCGA
TATGGTTTATTGGAAATGAGTTCCACTTACTTCCTATTCTATTAGGTATAGTGATGTTCTTACAACAGAAGGTCACGAGT
TTGCATAAGAAAGGACCTGTTACGGATCAGCAGAAACAGCAACAAGTTATGGGGAACATGATGGCGATTTTATTTACCGC
TATGTTCTATAACTTCCCTTCAGGATTAAACATCTATTGGCTTTCGTCTATGATTTTAGGAGTCGTCCAGCAGTGGATCA
CTAATAAGATATTAGATAGCAAACATCTTAAAAATGAAGTGGTTTTAAATAATAAAAAACATCGATAA

Upstream 100 bases:

>100_bases
CTATCACAATAAGAGACCTGTATTGAGAGATTCTCCTTTGGGAGATAATGTGGGTTTATGATATTTTGACCTCTTAAGTT
TAATTTTTAGAGTTTATCAA

Downstream 100 bases:

>100_bases
TACTGAAAAAAAAGTCGAATTGTCTTAATACAGGCTTATTGAAACAAGCGATTTATATGAGCTCATAGTTTATGCGAGCA
TGGGAAGAATTTCTTTTGCT

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 795; Mature: 795

Protein sequence:

>795_residues
MNKRTLLFVSLIGIAFVGCQIFFGYNEFRSCKNLAEKQRKISEQTLAAVESVGLSVASWDTDVNGEEHKNNYAVRVGDKL
FLLHNGEAAQSVYSSGESWSFVDHKCGFDNIHLALYRQQGSSFNPTNTGKVFLPTNHEGLPVLVVEFRNNKEPLVFLGEY
AQGRISNKDSTIFGTALVFWRSGSDYIPLGLYDSREEKLVSLDLPITRAVIFGNDQDSAKSSDTANHYVLFNDYMQIIVS
EESGSIEGINLPFASTNNKSIVNEIGFDRDLASEKSPEALFPGLSSKLPDGQQAKNSIGGYYPLLRRGLLSDSKKLLPLE
YHALNVVSGRELATPVALRYRVLSYTPHSIQLESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEI
MSNASAPTIKYRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIASGYGSLYISGSTAPTRLS
AISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPTLKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAA
LLFIIMKFFKLVTGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKNEPKRAQMEIMGLYKTNKVN
PITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQTSIWFIGNEFHLLPILLGIVMFLQQKVTS
LHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLNIYWLSSMILGVVQQWITNKILDSKHLKNEVVLNNKKHR

Sequences:

>Translated_795_residues
MNKRTLLFVSLIGIAFVGCQIFFGYNEFRSCKNLAEKQRKISEQTLAAVESVGLSVASWDTDVNGEEHKNNYAVRVGDKL
FLLHNGEAAQSVYSSGESWSFVDHKCGFDNIHLALYRQQGSSFNPTNTGKVFLPTNHEGLPVLVVEFRNNKEPLVFLGEY
AQGRISNKDSTIFGTALVFWRSGSDYIPLGLYDSREEKLVSLDLPITRAVIFGNDQDSAKSSDTANHYVLFNDYMQIIVS
EESGSIEGINLPFASTNNKSIVNEIGFDRDLASEKSPEALFPGLSSKLPDGQQAKNSIGGYYPLLRRGLLSDSKKLLPLE
YHALNVVSGRELATPVALRYRVLSYTPHSIQLESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEI
MSNASAPTIKYRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIASGYGSLYISGSTAPTRLS
AISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPTLKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAA
LLFIIMKFFKLVTGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKNEPKRAQMEIMGLYKTNKVN
PITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQTSIWFIGNEFHLLPILLGIVMFLQQKVTS
LHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLNIYWLSSMILGVVQQWITNKILDSKHLKNEVVLNNKKHR
>Mature_795_residues
MNKRTLLFVSLIGIAFVGCQIFFGYNEFRSCKNLAEKQRKISEQTLAAVESVGLSVASWDTDVNGEEHKNNYAVRVGDKL
FLLHNGEAAQSVYSSGESWSFVDHKCGFDNIHLALYRQQGSSFNPTNTGKVFLPTNHEGLPVLVVEFRNNKEPLVFLGEY
AQGRISNKDSTIFGTALVFWRSGSDYIPLGLYDSREEKLVSLDLPITRAVIFGNDQDSAKSSDTANHYVLFNDYMQIIVS
EESGSIEGINLPFASTNNKSIVNEIGFDRDLASEKSPEALFPGLSSKLPDGQQAKNSIGGYYPLLRRGLLSDSKKLLPLE
YHALNVVSGRELATPVALRYRVLSYTPHSIQLESLDRSVQKVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEI
MSNASAPTIKYRVIKKNKGSLDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIASGYGSLYISGSTAPTRLS
AISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPTLKVLDKTITQEKGENPEYLDSISFRGVFAFITAPFAA
LLFIIMKFFKLVTGSWGISIILLTVFLKLLLYPLNAWSIRSMRRMQILSPYIQQIQQKYKNEPKRAQMEIMGLYKTNKVN
PITGCLPLLIQLPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWQTSIWFIGNEFHLLPILLGIVMFLQQKVTS
LHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLNIYWLSSMILGVVQQWITNKILDSKHLKNEVVLNNKKHR

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1790140, Length=246, Percent_Identity=34.1463414634146, Blast_Score=147, Evalue=3e-36,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_CHLPN (Q7VQ46)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   E81575
- PIR:   F86529
- PIR:   G72092
- RefSeq:   NP_224515.1
- RefSeq:   NP_300369.1
- RefSeq:   NP_444996.1
- RefSeq:   NP_876595.1
- GeneID:   1467002
- GeneID:   895540
- GeneID:   919088
- GeneID:   962862
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0448
- KEGG:   cpn:CPn0310
- KEGG:   cpt:CpB0319
- TIGR:   CP_0448
- HOGENOM:   HBG414011
- OMA:   ALLFIIM
- ProtClustDB:   PRK01001
- BioCyc:   CPNE115711:CP_0448-MONOMER
- BioCyc:   CPNE115713:CPN0310-MONOMER
- BioCyc:   CPNE138677:CPJ0310-MONOMER
- BioCyc:   CPNE182082:CPB0319-MONOMER
- HAMAP:   MF_01810
- InterPro:   IPR019998
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- PRINTS:   PR01900
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 89320; Mature: 89320

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xbd4f798)-; HASH(0xbe610d4)-; HASH(0xc8c0380)-; HASH(0xc84da94)-; HASH(0xcda71ac)-; HASH(0xcb3c95c)-; HASH(0xc8da720)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.4 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKRTLLFVSLIGIAFVGCQIFFGYNEFRSCKNLAEKQRKISEQTLAAVESVGLSVASWD
CCCCCCHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
TDVNGEEHKNNYAVRVGDKLFLLHNGEAAQSVYSSGESWSFVDHKCGFDNIHLALYRQQG
CCCCCCCCCCCEEEEECCEEEEEECCHHHHHHHCCCCCCEECCCCCCCCCEEEEEEECCC
SSFNPTNTGKVFLPTNHEGLPVLVVEFRNNKEPLVFLGEYAQGRISNKDSTIFGTALVFW
CCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEE
RSGSDYIPLGLYDSREEKLVSLDLPITRAVIFGNDQDSAKSSDTANHYVLFNDYMQIIVS
ECCCCEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECEEEEEEE
EESGSIEGINLPFASTNNKSIVNEIGFDRDLASEKSPEALFPGLSSKLPDGQQAKNSIGG
CCCCCEEEEECCCCCCCCCHHHHHCCCCCHHCCCCCCCHHCCCCCCCCCCCHHHHHHCCC
YYPLLRRGLLSDSKKLLPLEYHALNVVSGRELATPVALRYRVLSYTPHSIQLESLDRSVQ
HHHHHHHHHHCCCCCCCEEEEHEEEEECCCHHHCHHHHHEEHEECCCCCEEHHHHHHHHH
KVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSNASAPTIKYRVIKKNKGS
HHHCCCCCCCCCCEEEEEEEEEEECCCCEEEECCCCCEEEECCCCCCEEEEEEEECCCCC
LDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIASGYGSLYISGSTAPTRLS
CCCEECCCCCCCHHHHCCCCCEEEECCCCEEEEEECCHHHHCCCCCEEEEECCCCCCEEE
AISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPTLKVLDKTITQEKGENPE
ECCCCCCEEECCCCCCCCEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCH
YLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILLTVFLKLLLYPLNAWSIR
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHH
SMRRMQILSPYIQQIQQKYKNEPKRAQMEIMGLYKTNKVNPITGCLPLLIQLPFLIAMFD
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
LLKSSFLLRGASFIPGWIDNLTAPDVLFSWQTSIWFIGNEFHLLPILLGIVMFLQQKVTS
HHHHHHHHCCCCCCCHHHHCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHH
LHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLNIYWLSSMILGVVQQWITNKILDS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KHLKNEVVLNNKKHR
HHHCCCCCCCCCCCH
>Mature Secondary Structure
MNKRTLLFVSLIGIAFVGCQIFFGYNEFRSCKNLAEKQRKISEQTLAAVESVGLSVASWD
CCCCCCHHHHHHHHHHHHHHHEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEECC
TDVNGEEHKNNYAVRVGDKLFLLHNGEAAQSVYSSGESWSFVDHKCGFDNIHLALYRQQG
CCCCCCCCCCCEEEEECCEEEEEECCHHHHHHHCCCCCCEECCCCCCCCCEEEEEEECCC
SSFNPTNTGKVFLPTNHEGLPVLVVEFRNNKEPLVFLGEYAQGRISNKDSTIFGTALVFW
CCCCCCCCCEEEECCCCCCCEEEEEEECCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEE
RSGSDYIPLGLYDSREEKLVSLDLPITRAVIFGNDQDSAKSSDTANHYVLFNDYMQIIVS
ECCCCEEEECCCCCCCCEEEEECCCEEEEEEECCCCCCCCCCCCCCEEEEEECEEEEEEE
EESGSIEGINLPFASTNNKSIVNEIGFDRDLASEKSPEALFPGLSSKLPDGQQAKNSIGG
CCCCCEEEEECCCCCCCCCHHHHHCCCCCHHCCCCCCCHHCCCCCCCCCCCHHHHHHCCC
YYPLLRRGLLSDSKKLLPLEYHALNVVSGRELATPVALRYRVLSYTPHSIQLESLDRSVQ
HHHHHHHHHHCCCCCCCEEEEHEEEEECCCHHHCHHHHHEEHEECCCCCEEHHHHHHHHH
KVYKLPENPEEKPYVFETAITLTKETEDVWVTSGVPEVEIMSNASAPTIKYRVIKKNKGS
HHHCCCCCCCCCCEEEEEEEEEEECCCCEEEECCCCCEEEECCCCCCEEEEEEEECCCCC
LDKVKLPKVKEPLAVRRGVYPQWILNSNGYFGIILTPLSEIASGYGSLYISGSTAPTRLS
CCCEECCCCCCCHHHHCCCCCEEEECCCCEEEEEECCHHHHCCCCCEEEEECCCCCCEEE
AISPKNQLYPVSKYPGYETLLPLPKDAGTHRFLVYAGPLAEPTLKVLDKTITQEKGENPE
ECCCCCCEEECCCCCCCCEECCCCCCCCCEEEEEEECCCCCHHHHHHHHHHHHCCCCCCH
YLDSISFRGVFAFITAPFAALLFIIMKFFKLVTGSWGISIILLTVFLKLLLYPLNAWSIR
HHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCCHHHH
SMRRMQILSPYIQQIQQKYKNEPKRAQMEIMGLYKTNKVNPITGCLPLLIQLPFLIAMFD
HHHHHHHHHHHHHHHHHHHCCCCCHHHHHEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH
LLKSSFLLRGASFIPGWIDNLTAPDVLFSWQTSIWFIGNEFHLLPILLGIVMFLQQKVTS
HHHHHHHHCCCCCCCHHHHCCCCCCCEEEECCEEEEECCCCCHHHHHHHHHHHHHHHHHH
LHKKGPVTDQQKQQQVMGNMMAILFTAMFYNFPSGLNIYWLSSMILGVVQQWITNKILDS
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH
KHLKNEVVLNNKKHR
HHHCCCCCCCCCCCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362