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Identifier: 15835836

GI number: 15835836

Start: 339872

End: 340387

Strand: Direct

Name: Not Available

Synonym: CPj0301

Alternate gene names: NA

Gene position: 339872-340387 (Clockwise)

Preceding gene: 15835835

Following gene: 15835837

Centisome position: 27.71

GC content: 33.91

Gene sequence:

>516_bases
ATGAAAAAATTATTATTTTCTACATTTCTTCTTGTTTTAGGATCAACAAGCGCAGCTCATGCAAATTTAGGCTATGTTAA
TTTAAAGCGATGTCTTGAAGAATCCGATCTAGGTAAAAAGGAAACTGAAGAATTGGAAGCTATGAAACAGCAGTTTGTAA
AAAATGCTGAGAAAATAGAAGAAGAACTCACTTCTATTTATAATAAGTTGCAAGATGAAGATTACATGGAAAGCCTATCG
GATTCTGCCTCTGAAGAGTTGCGAAAGAAATTCGAAGATCTTTCAGGAGAGTACAATGCGTACCAGTCTCAGTACTATCA
ATCTATCAATCAAAGTAATGTAAAACGCATTCAAAAACTCATTCAAGAAGTAAAAATAGCTGCAGAATCAGTGCGGTCCA
AAGAAAAACTAGAAGCTATCCTTAATGAAGAAGCTGTCTTAGCAATAGCACCTGGGACTGATAAAACAACCGAAATTATT
GCTATTCTTAACGAATCTTTCAAAAAACAAAACTAG

Upstream 100 bases:

>100_bases
TTCTAGGATATAAATTAAGGACTTATCGAAGGAAATCTTTGTTGTTTTCAGAAAAGGCTTTTGGTACCCTTTTTCTATAC
CCAAGTTAGTACAGGTAATT

Downstream 100 bases:

>100_bases
TCCAAGTTTAAGGAGTTTTCTATGTCCGAAGCACCAGTCTACACTCTTAAACAGTTAGCTGAGCTACTACAAGTCGAAGT
TCAAGGAAATATAGAAACTC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 171; Mature: 171

Protein sequence:

>171_residues
MKKLLFSTFLLVLGSTSAAHANLGYVNLKRCLEESDLGKKETEELEAMKQQFVKNAEKIEEELTSIYNKLQDEDYMESLS
DSASEELRKKFEDLSGEYNAYQSQYYQSINQSNVKRIQKLIQEVKIAAESVRSKEKLEAILNEEAVLAIAPGTDKTTEII
AILNESFKKQN

Sequences:

>Translated_171_residues
MKKLLFSTFLLVLGSTSAAHANLGYVNLKRCLEESDLGKKETEELEAMKQQFVKNAEKIEEELTSIYNKLQDEDYMESLS
DSASEELRKKFEDLSGEYNAYQSQYYQSINQSNVKRIQKLIQEVKIAAESVRSKEKLEAILNEEAVLAIAPGTDKTTEII
AILNESFKKQN
>Mature_171_residues
MKKLLFSTFLLVLGSTSAAHANLGYVNLKRCLEESDLGKKETEELEAMKQQFVKNAEKIEEELTSIYNKLQDEDYMESLS
DSASEELRKKFEDLSGEYNAYQSQYYQSINQSNVKRIQKLIQEVKIAAESVRSKEKLEAILNEEAVLAIAPGTDKTTEII
AILNESFKKQN

Specific function: Unknown

COG id: COG2825

COG function: function code M; Outer membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the skp family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): SKPL_CHLPN (Q9Z8N7)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   E72094
- PIR:   E86528
- RefSeq:   NP_224506.1
- RefSeq:   NP_300360.1
- RefSeq:   NP_445005.1
- RefSeq:   NP_876586.1
- ProteinModelPortal:   Q9Z8N7
- PHCI-2DPAGE:   Q9Z8N7
- GeneID:   1466993
- GeneID:   895026
- GeneID:   919084
- GeneID:   962728
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0457
- KEGG:   cpj:CPj0301
- KEGG:   cpn:CPn0301
- KEGG:   cpt:CpB0310
- TIGR:   CP_0457
- HOGENOM:   HBG056953
- OMA:   CLEESAF
- ProtClustDB:   CLSK871276
- BioCyc:   CPNE115711:CP_0457-MONOMER
- BioCyc:   CPNE115713:CPN0301-MONOMER
- BioCyc:   CPNE138677:CPJ0301-MONOMER
- BioCyc:   CPNE182082:CPB0310-MONOMER
- InterPro:   IPR005632
- SMART:   SM00935

Pfam domain/function: PF03938 OmpH; SSF111384 OM_chaperone_Skp/OmpH

EC number: NA

Molecular weight: Translated: 19482; Mature: 19482

Theoretical pI: Translated: 4.67; Mature: 4.67

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKKLLFSTFLLVLGSTSAAHANLGYVNLKRCLEESDLGKKETEELEAMKQQFVKNAEKIE
CHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
EELTSIYNKLQDEDYMESLSDSASEELRKKFEDLSGEYNAYQSQYYQSINQSNVKRIQKL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IQEVKIAAESVRSKEKLEAILNEEAVLAIAPGTDKTTEIIAILNESFKKQN
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKKLLFSTFLLVLGSTSAAHANLGYVNLKRCLEESDLGKKETEELEAMKQQFVKNAEKIE
CHHHHHHHHHHHHCCCCHHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
EELTSIYNKLQDEDYMESLSDSASEELRKKFEDLSGEYNAYQSQYYQSINQSNVKRIQKL
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHH
IQEVKIAAESVRSKEKLEAILNEEAVLAIAPGTDKTTEIIAILNESFKKQN
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362