Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835823

GI number: 15835823

Start: 324190

End: 325338

Strand: Reverse

Name: Not Available

Synonym: CPj0288

Alternate gene names: NA

Gene position: 325338-324190 (Counterclockwise)

Preceding gene: 15835830

Following gene: 15835822

Centisome position: 26.52

GC content: 41.08

Gene sequence:

>1149_bases
ATGTCTTGTTTTAATCTTACATCTACAAACGAAAGTTTAAGACCAATTAGTCCTAAGGCATCTTTCCCCAAACAAGGATG
GCAAAGCTATTTTCGTTCAGCATTGCGAAAGCATAGATCTGATACCCTGTCCGTTTCTGTTTGTAAAGTGAATAAATATG
ATGCGAACCTTTTTGTGAGGCTCACGGTGATCGCTCTTGCTGTCGTGGGTGTGTTGATTCTATTCAGTATAATGTTAGCG
AGCATACAAGGTACACTTGTAATTACTTCCTGGCCTTTGGTTACTGCAGCAATTCTTATCCCAACAATTTTGCTTACTGG
AGGCATGTACATTCTGCATCGTCTGGGGAAGAAAGTAGATGTAATTTCAGGGGTGTGTATTCCACCTTTTAGCAGACGGT
GTTGGGTTCCTATATCCTCCAGCCATACTTTGGAAAAATTCGATGAAAAGCACGTGAGTGCTTGCTCTTATCTAGATATA
TCGACGCTGAGTGCTGACGGTTCTGGAATAGCTGCGGTTTATCAATGTCCACCATTATTATTTCGCGCATTCCCTTGTTT
TGGAATTCCGTGTGCGATGCCTTTTGTAGCTTTGCTTAGAATGATTTACAATTTGATACGCTTTTTAGTGGTTCCATTTT
ATATCATTTTCCGAATGATTTACGAGCATTTTTTCTGTAAACATCTTCCCGAAGACGATAGATTTATTTATAAAGATGTT
GCTCGAGAGATGGGGCGGTCTCTTGCTGCTTTTTTGAAAGCTCCTTTTTATGCTTCTGCATGTATGATAGGAGCTTTTTA
TAGTTTGTTGGACCCTCTTGCAGGCCGTGTATTGATGGGGAGTGTAGAAAGAGATTGGAATGATAACGTGATACTTGCGC
GATCTGTATCTTTAGCCAATGAGGCTCATTCCTTATTCCGATTTGAAGGAGGTGGGGGGCGTAAAGGTTTAGGACAGCAT
GCTTTTTATTTGATGTTGTGTTGCCAGCCACAATCTGTCTTCCTTTTTGATAAAGGAGAAATTGTTTCTGGAGCCCATCC
CTCAATCCAGCTCCCTGAGAGACGAGGGCTCGACACTAGTGGTAGATATCCACATATAAGTGTGATCCCTGATTCGGGGA
ATGACAGTGCTAAAAATTTTATTGTTTAA

Upstream 100 bases:

>100_bases
TTCATAAGTCGATTAAAATTTTAATTGGTAAATAAGTATAACAATTCGTGAATTTCTTTTCTTTGGGTTTGAATGCCGAG
CAAAATTTTATAATGTAATT

Downstream 100 bases:

>100_bases
GTATCAAAAGAATTTAACCTAGAGTCTTTTGCGAGTTTTAAACAAGATTTATAGTGACAGGCTCTTTGTTTTAAAGACGA
TGGGCAGCCTTTTCTAAAGG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 382; Mature: 381

Protein sequence:

>382_residues
MSCFNLTSTNESLRPISPKASFPKQGWQSYFRSALRKHRSDTLSVSVCKVNKYDANLFVRLTVIALAVVGVLILFSIMLA
SIQGTLVITSWPLVTAAILIPTILLTGGMYILHRLGKKVDVISGVCIPPFSRRCWVPISSSHTLEKFDEKHVSACSYLDI
STLSADGSGIAAVYQCPPLLFRAFPCFGIPCAMPFVALLRMIYNLIRFLVVPFYIIFRMIYEHFFCKHLPEDDRFIYKDV
AREMGRSLAAFLKAPFYASACMIGAFYSLLDPLAGRVLMGSVERDWNDNVILARSVSLANEAHSLFRFEGGGGRKGLGQH
AFYLMLCCQPQSVFLFDKGEIVSGAHPSIQLPERRGLDTSGRYPHISVIPDSGNDSAKNFIV

Sequences:

>Translated_382_residues
MSCFNLTSTNESLRPISPKASFPKQGWQSYFRSALRKHRSDTLSVSVCKVNKYDANLFVRLTVIALAVVGVLILFSIMLA
SIQGTLVITSWPLVTAAILIPTILLTGGMYILHRLGKKVDVISGVCIPPFSRRCWVPISSSHTLEKFDEKHVSACSYLDI
STLSADGSGIAAVYQCPPLLFRAFPCFGIPCAMPFVALLRMIYNLIRFLVVPFYIIFRMIYEHFFCKHLPEDDRFIYKDV
AREMGRSLAAFLKAPFYASACMIGAFYSLLDPLAGRVLMGSVERDWNDNVILARSVSLANEAHSLFRFEGGGGRKGLGQH
AFYLMLCCQPQSVFLFDKGEIVSGAHPSIQLPERRGLDTSGRYPHISVIPDSGNDSAKNFIV
>Mature_381_residues
SCFNLTSTNESLRPISPKASFPKQGWQSYFRSALRKHRSDTLSVSVCKVNKYDANLFVRLTVIALAVVGVLILFSIMLAS
IQGTLVITSWPLVTAAILIPTILLTGGMYILHRLGKKVDVISGVCIPPFSRRCWVPISSSHTLEKFDEKHVSACSYLDIS
TLSADGSGIAAVYQCPPLLFRAFPCFGIPCAMPFVALLRMIYNLIRFLVVPFYIIFRMIYEHFFCKHLPEDDRFIYKDVA
REMGRSLAAFLKAPFYASACMIGAFYSLLDPLAGRVLMGSVERDWNDNVILARSVSLANEAHSLFRFEGGGGRKGLGQHA
FYLMLCCQPQSVFLFDKGEIVSGAHPSIQLPERRGLDTSGRYPHISVIPDSGNDSAKNFIV

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 42444; Mature: 42313

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.1 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
5.8 %Cys+Met (Translated Protein)
3.1 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
5.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSCFNLTSTNESLRPISPKASFPKQGWQSYFRSALRKHRSDTLSVSVCKVNKYDANLFVR
CCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHH
LTVIALAVVGVLILFSIMLASIQGTLVITSWPLVTAAILIPTILLTGGMYILHRLGKKVD
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCHHHHHHHHCCHHH
VISGVCIPPFSRRCWVPISSSHTLEKFDEKHVSACSYLDISTLSADGSGIAAVYQCPPLL
HHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEHHCCHHH
FRAFPCFGIPCAMPFVALLRMIYNLIRFLVVPFYIIFRMIYEHFFCKHLPEDDRFIYKDV
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AREMGRSLAAFLKAPFYASACMIGAFYSLLDPLAGRVLMGSVERDWNDNVILARSVSLAN
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHH
EAHSLFRFEGGGGRKGLGQHAFYLMLCCQPQSVFLFDKGEIVSGAHPSIQLPERRGLDTS
HHHHHEEECCCCCCCCCCHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHCCCCCC
GRYPHISVIPDSGNDSAKNFIV
CCCCEEEEECCCCCCCCCCCCC
>Mature Secondary Structure 
SCFNLTSTNESLRPISPKASFPKQGWQSYFRSALRKHRSDTLSVSVCKVNKYDANLFVR
CCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEEEEECCCCHHHHH
LTVIALAVVGVLILFSIMLASIQGTLVITSWPLVTAAILIPTILLTGGMYILHRLGKKVD
HHHHHHHHHHHHHHHHHHHHHCCCCEEEECCHHHHHHHHHHHHHHHCHHHHHHHHCCHHH
VISGVCIPPFSRRCWVPISSSHTLEKFDEKHVSACSYLDISTLSADGSGIAAVYQCPPLL
HHCCCCCCCCCCEEEEECCCCCHHHHHHHHHHHHHCCCEEEEECCCCCCEEEEHHCCHHH
FRAFPCFGIPCAMPFVALLRMIYNLIRFLVVPFYIIFRMIYEHFFCKHLPEDDRFIYKDV
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHH
AREMGRSLAAFLKAPFYASACMIGAFYSLLDPLAGRVLMGSVERDWNDNVILARSVSLAN
HHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEEEEEHHHHH
EAHSLFRFEGGGGRKGLGQHAFYLMLCCQPQSVFLFDKGEIVSGAHPSIQLPERRGLDTS
HHHHHEEECCCCCCCCCCHHEEEEEEEECCCEEEEEECCCCCCCCCCCCCCCHHCCCCCC
GRYPHISVIPDSGNDSAKNFIV
CCCCEEEEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA