| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835822
GI number: 15835822
Start: 321708
End: 323843
Strand: Reverse
Name: Not Available
Synonym: CPj0287
Alternate gene names: NA
Gene position: 323843-321708 (Counterclockwise)
Preceding gene: 15835823
Following gene: 15835821
Centisome position: 26.4
GC content: 38.81
Gene sequence:
>2136_bases ATGATTAGATCACCATTACCTTTTATTTCCTCTAAAAGAGCCTTAAATATGTTGGGCTTGCAGGATGAGTTCAGTTGTCC AGAAGATGTGGTTGATTTCCTTTTCTCTGAAATTGAATTATTGGCACAACAAGACGAACCGAGCGAGGGCTACTTAGCTT TGTCTCGGTCTCTATTAATGATGACTCACAATCACCCTAAAGTTGTAAAGAGAGTGATTTTCTATGGGGTCTCTTATGGT TTAAAACATAAAAGTATGTCGATTTTCATTGATGTTTTGACCTATATAGATTTTCTTTTTGAAAAATTAGGAATTAGTGC TTCTGATAGGCTTTCCTTGTGCTCTGCAAGAACCTGTATCAATTTTGAACTTTATTCTCAGACGGGAGAGATGAAATTTC TCTCTGAAGTTGTAGATAATTTCCGTTTAATAGAACAGCTTTTGAAAATGCATCCTCAACTGAAGAATCGTTTAGGATGG GAGCACTTCCGTATAGGAGCTAAGCAAGAAGAGGTTTCTTTAGTAGCAAGTGCTTCTGTGTATCAGGCTGTGGGCCGTAG TTTTATAGAATTATACCACAAGCACTTAGAATTGAGTGATTTGGCCTGCGGCATGAAATGTCTGGCCTTAGCTCTAGATT TATCACCTAATAATGCTCATATCCATGCTGACTATGCTAAGGGCCTGGTAGTTTTAGGAACTAGACAGGGAAAGTCTTTG CTCATAGAAAGAGGGATGGAGCATTTTTCTAAAGCCATTTTTCTGAGTTTCAGCAGGGATGGTGACACCCTTGCCTATCA AAATTATCGTTATAGCTATGCTCTTGCTTCTGTGAAGTTATTCGATCTGACTTATAAAAAAGAGCATTTTGATCAGGCTA TGAACATCCTTTACCAAACCGTTCAGGCGTTTCCTAATCTTTCAGGGCTATGGATGGTTTGGGGTGAGCTCCTCATTCGT TCGGGATGGTTGAATAGTAATATGAAGTATATTGAAGTTGGTTTAGAAAAACTGGCTTCTTTACAAAAAAAGACGAATGA TCCCATTGCGCTTTCAGGTTTACTAGCTACAGGGATTGCTATTTTAGGGTTATACTTAGAAGAACCAAATTTATTTAAAG ATAGTCGGCACAGGCTGATTTCTGCTATGAGGACGTTTCCTGGCAATAGTGCGTTAGTCCATGCTCTTGGTGTTGTGCAG CTTTGCTCCGCACTTTATTTCAATGAGGACTCGCATTTTGCTTCTGCTATTTCTTGTTTTCAGTCTTGTTTAGAATGGGA TTTGGATGCGACAGGAATGTGGCAAAAATTATTTGATGCATATTTTTCTTGGGGGATCAAGAAAAAAAGTGCTAGATTGC TACGAAAAGCTGTAGATGTAGCAAGTAGGTTATGTTCTTTGCGTCCAGAGGCTTTTTTATTTTGGAGTGATCGAGGATTA GCATTAAAATGCTTGGCAGAAGCCACAATCGATGAAGCTTATAAAGAAATTTTCTTATCAGAGTCACTGTTACATTATCA GAGAGCGTGGGATTTAAGTGGTCGACTGGAAATCCTAGAACTTTGGGGACAATCTCATTATTTGCTTGCCGAACTGCAAC AAAGTTTGTTTCATTATGATGAGGCATACACACTTTTAACTAAGGTAGATCTTACTTTATCCTCCTCTAGGGTTAAATTG ATTCTTGCTGCGGTTTTGTTGGGGAAAGGAAGATTACTACAAGATACAGACCCGGCTGAAGAAGCACGGGAGATTTTAGA ACCTCTAGTTGAAGTTTATCTTGAAGATGAGAATTTCTTACTACTGTTAGGAAAAGTATACTTATTCCTATTTTGGAAAA ATAAGAATGTGTGTTTAGGTAAGCTTGCTAGAACATATTTAGAGAAGGCAACTTCTTTGGGGTGTCCAGAGGCGTATTAT ACTTTGGGAAAGTTTTATGCAGTGATCAAAGATGTGAACAAGGCGTGGGGAATGGTCATTCGCTCTGCGCAGTATGGCGT TCGTATTACAGAAGCCAAGTGGTTAAACGATCCTTATTTAGCTAACCTCAGGGAAATCCATGCATTTCGTGAAGTTGTAG AGAATCAAAAGGGAAGATTATGGTTGGGGAACAAAACCGAAATGAAGAGAAACTAG
Upstream 100 bases:
>100_bases TTTTTAGAATTCTTTTCAAAAACTAGTTTTTATTAGTGGGTAAGAACACCTTCTAATATGAATTTCAAGGTGATTTAGCT ATGATAATTAAAGAAGGTGT
Downstream 100 bases:
>100_bases ATACAGCTTTTAGTTCTGGGAACTTGATGGATTCCAGGACGAGTCATCTAGATGACGAGCTGAGTTTTAAGTTAGAAAAA GCATTTACTTGTCTTTCTAC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 711; Mature: 711
Protein sequence:
>711_residues MIRSPLPFISSKRALNMLGLQDEFSCPEDVVDFLFSEIELLAQQDEPSEGYLALSRSLLMMTHNHPKVVKRVIFYGVSYG LKHKSMSIFIDVLTYIDFLFEKLGISASDRLSLCSARTCINFELYSQTGEMKFLSEVVDNFRLIEQLLKMHPQLKNRLGW EHFRIGAKQEEVSLVASASVYQAVGRSFIELYHKHLELSDLACGMKCLALALDLSPNNAHIHADYAKGLVVLGTRQGKSL LIERGMEHFSKAIFLSFSRDGDTLAYQNYRYSYALASVKLFDLTYKKEHFDQAMNILYQTVQAFPNLSGLWMVWGELLIR SGWLNSNMKYIEVGLEKLASLQKKTNDPIALSGLLATGIAILGLYLEEPNLFKDSRHRLISAMRTFPGNSALVHALGVVQ LCSALYFNEDSHFASAISCFQSCLEWDLDATGMWQKLFDAYFSWGIKKKSARLLRKAVDVASRLCSLRPEAFLFWSDRGL ALKCLAEATIDEAYKEIFLSESLLHYQRAWDLSGRLEILELWGQSHYLLAELQQSLFHYDEAYTLLTKVDLTLSSSRVKL ILAAVLLGKGRLLQDTDPAEEAREILEPLVEVYLEDENFLLLLGKVYLFLFWKNKNVCLGKLARTYLEKATSLGCPEAYY TLGKFYAVIKDVNKAWGMVIRSAQYGVRITEAKWLNDPYLANLREIHAFREVVENQKGRLWLGNKTEMKRN
Sequences:
>Translated_711_residues MIRSPLPFISSKRALNMLGLQDEFSCPEDVVDFLFSEIELLAQQDEPSEGYLALSRSLLMMTHNHPKVVKRVIFYGVSYG LKHKSMSIFIDVLTYIDFLFEKLGISASDRLSLCSARTCINFELYSQTGEMKFLSEVVDNFRLIEQLLKMHPQLKNRLGW EHFRIGAKQEEVSLVASASVYQAVGRSFIELYHKHLELSDLACGMKCLALALDLSPNNAHIHADYAKGLVVLGTRQGKSL LIERGMEHFSKAIFLSFSRDGDTLAYQNYRYSYALASVKLFDLTYKKEHFDQAMNILYQTVQAFPNLSGLWMVWGELLIR SGWLNSNMKYIEVGLEKLASLQKKTNDPIALSGLLATGIAILGLYLEEPNLFKDSRHRLISAMRTFPGNSALVHALGVVQ LCSALYFNEDSHFASAISCFQSCLEWDLDATGMWQKLFDAYFSWGIKKKSARLLRKAVDVASRLCSLRPEAFLFWSDRGL ALKCLAEATIDEAYKEIFLSESLLHYQRAWDLSGRLEILELWGQSHYLLAELQQSLFHYDEAYTLLTKVDLTLSSSRVKL ILAAVLLGKGRLLQDTDPAEEAREILEPLVEVYLEDENFLLLLGKVYLFLFWKNKNVCLGKLARTYLEKATSLGCPEAYY TLGKFYAVIKDVNKAWGMVIRSAQYGVRITEAKWLNDPYLANLREIHAFREVVENQKGRLWLGNKTEMKRN >Mature_711_residues MIRSPLPFISSKRALNMLGLQDEFSCPEDVVDFLFSEIELLAQQDEPSEGYLALSRSLLMMTHNHPKVVKRVIFYGVSYG LKHKSMSIFIDVLTYIDFLFEKLGISASDRLSLCSARTCINFELYSQTGEMKFLSEVVDNFRLIEQLLKMHPQLKNRLGW EHFRIGAKQEEVSLVASASVYQAVGRSFIELYHKHLELSDLACGMKCLALALDLSPNNAHIHADYAKGLVVLGTRQGKSL LIERGMEHFSKAIFLSFSRDGDTLAYQNYRYSYALASVKLFDLTYKKEHFDQAMNILYQTVQAFPNLSGLWMVWGELLIR SGWLNSNMKYIEVGLEKLASLQKKTNDPIALSGLLATGIAILGLYLEEPNLFKDSRHRLISAMRTFPGNSALVHALGVVQ LCSALYFNEDSHFASAISCFQSCLEWDLDATGMWQKLFDAYFSWGIKKKSARLLRKAVDVASRLCSLRPEAFLFWSDRGL ALKCLAEATIDEAYKEIFLSESLLHYQRAWDLSGRLEILELWGQSHYLLAELQQSLFHYDEAYTLLTKVDLTLSSSRVKL ILAAVLLGKGRLLQDTDPAEEAREILEPLVEVYLEDENFLLLLGKVYLFLFWKNKNVCLGKLARTYLEKATSLGCPEAYY TLGKFYAVIKDVNKAWGMVIRSAQYGVRITEAKWLNDPYLANLREIHAFREVVENQKGRLWLGNKTEMKRN
Specific function: Unknown
COG id: COG0457
COG function: function code R; FOG: TPR repeat
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 81133; Mature: 81133
Theoretical pI: Translated: 7.40; Mature: 7.40
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.7 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 1.7 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIRSPLPFISSKRALNMLGLQDEFSCPEDVVDFLFSEIELLAQQDEPSEGYLALSRSLLM CCCCCCCCHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH MTHNHPKVVKRVIFYGVSYGLKHKSMSIFIDVLTYIDFLFEKLGISASDRLSLCSARTCI HCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEE NFELYSQTGEMKFLSEVVDNFRLIEQLLKMHPQLKNRLGWEHFRIGAKQEEVSLVASASV EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHCCCCCHHHHHHHHHHHH YQAVGRSFIELYHKHLELSDLACGMKCLALALDLSPNNAHIHADYAKGLVVLGTRQGKSL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCEEEEHHHCCEEEEECCCCHHH LIERGMEHFSKAIFLSFSRDGDTLAYQNYRYSYALASVKLFDLTYKKEHFDQAMNILYQT HHHHHHHHHHHHEEEEECCCCCEEEEECCEEEEHHHHEEEEEEHHHHHHHHHHHHHHHHH VQAFPNLSGLWMVWGELLIRSGWLNSNMKYIEVGLEKLASLQKKTNDPIALSGLLATGIA HHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ILGLYLEEPNLFKDSRHRLISAMRTFPGNSALVHALGVVQLCSALYFNEDSHFASAISCF HHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QSCLEWDLDATGMWQKLFDAYFSWGIKKKSARLLRKAVDVASRLCSLRPEAFLFWSDRGL HHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC ALKCLAEATIDEAYKEIFLSESLLHYQRAWDLSGRLEILELWGQSHYLLAELQQSLFHYD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH EAYTLLTKVDLTLSSSRVKLILAAVLLGKGRLLQDTDPAEEAREILEPLVEVYLEDENFL HHHHHHHHEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCEE LLLGKVYLFLFWKNKNVCLGKLARTYLEKATSLGCPEAYYTLGKFYAVIKDVNKAWGMVI EEHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RSAQYGVRITEAKWLNDPYLANLREIHAFREVVENQKGRLWLGNKTEMKRN HCCCCCEEEECCHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC >Mature Secondary Structure MIRSPLPFISSKRALNMLGLQDEFSCPEDVVDFLFSEIELLAQQDEPSEGYLALSRSLLM CCCCCCCCHHCCHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH MTHNHPKVVKRVIFYGVSYGLKHKSMSIFIDVLTYIDFLFEKLGISASDRLSLCSARTCI HCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHEE NFELYSQTGEMKFLSEVVDNFRLIEQLLKMHPQLKNRLGWEHFRIGAKQEEVSLVASASV EEEEECCCCHHHHHHHHHHHHHHHHHHHHHCHHHHHCCCHHHHCCCCCHHHHHHHHHHHH YQAVGRSFIELYHKHLELSDLACGMKCLALALDLSPNNAHIHADYAKGLVVLGTRQGKSL HHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHEECCCCCCEEEEHHHCCEEEEECCCCHHH LIERGMEHFSKAIFLSFSRDGDTLAYQNYRYSYALASVKLFDLTYKKEHFDQAMNILYQT HHHHHHHHHHHHEEEEECCCCCEEEEECCEEEEHHHHEEEEEEHHHHHHHHHHHHHHHHH VQAFPNLSGLWMVWGELLIRSGWLNSNMKYIEVGLEKLASLQKKTNDPIALSGLLATGIA HHHCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHH ILGLYLEEPNLFKDSRHRLISAMRTFPGNSALVHALGVVQLCSALYFNEDSHFASAISCF HHHHHCCCCCCCHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHH QSCLEWDLDATGMWQKLFDAYFSWGIKKKSARLLRKAVDVASRLCSLRPEAFLFWSDRGL HHHHHCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC ALKCLAEATIDEAYKEIFLSESLLHYQRAWDLSGRLEILELWGQSHYLLAELQQSLFHYD CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHCCCCHHHHHHHHHHHHHHH EAYTLLTKVDLTLSSSRVKLILAAVLLGKGRLLQDTDPAEEAREILEPLVEVYLEDENFL HHHHHHHHEEEEECCHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHEECCCCEE LLLGKVYLFLFWKNKNVCLGKLARTYLEKATSLGCPEAYYTLGKFYAVIKDVNKAWGMVI EEHHHHHEEEEECCCCCHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHH RSAQYGVRITEAKWLNDPYLANLREIHAFREVVENQKGRLWLGNKTEMKRN HCCCCCEEEECCHHCCCHHHHHHHHHHHHHHHHHCCCCCEEECCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA