| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835820
GI number: 15835820
Start: 318670
End: 320217
Strand: Reverse
Name: Not Available
Synonym: CPj0285
Alternate gene names: NA
Gene position: 320217-318670 (Counterclockwise)
Preceding gene: 15835821
Following gene: 15835819
Centisome position: 26.11
GC content: 39.15
Gene sequence:
>1548_bases TTGTTTAATTTATTTTTTTTCACTGCAAATAAAGAGACCACAGCAAGTCACGAGTTAATTTACAGGAAGAATCAGTCCTT CTCATTGTCTCCTGTGACTATTCTCTGTCTTTTAGCCATTTCGGTTCTTTTATTGCTGGGTGTTGTTTTCGCTTTGGTAG GGTGTCATGTACTTGCCGCTCCTCTAGGTCTTCTTGTTTGGGGGTGTGCCGCTTCAGTATGCTCCATGATGGCCATTGTT TCCCTAATGTGTTTGTATAAGGGAGGAAAACCCTTAATTGAGCCCTCTAACGAAGAAAAGATAGACCCCACCAAAGACCT TGAAATAAAAGACCCTGAAAGTCTTAAGCCTGTTCCGGTTGAAGGTCAAAGTCTTCCCAAAGAGCGTAAGACCGTTTCTT TTAAGGCTAAAATCCCATCAATAGTAGAAGATGATTTTAAGCCCTATGTTATCCAAAGTACATTTTATCATCAGAATAAA GTCTATTCTAAGCCGATAGCAGAGCGAATGCAGTCTCTAGAAAAAGAGATCACAACGTTAATTGTTGACTTCCCTCGCGC TCTGGAGGAAAGCTCTAAGAGTTCTGGTAGCTTGCTCAGGGGAGTCATCTCTGAAATTAAGAATCTTTTTCTTCCTCGTT TCTTGAGTCGCAAGGTAAAGTACTCTTTGACCGCTTGTTTAAGGCGTCTGGGATCTATAGTAGAAGAATATGCAAGCTCT GACCTACTCATTCTTCTTTTAACAAAACCAGAGCCTTTAAATATGGTGACCCAACAGTTGATTGCGCACCTGAATTCTTT AAAAACGGAAAAACGAAAGCTCACTCCTCATATGCAGAAGTTGGTACTTTCTATTAATTTTTGGTTCTATGGATGGTCAT TAGAGGAAAAGTGTATTGAAAAAATCGTTGCATACGACCCTAATCTTCTTACTGACGAGTTAAAGGCGCATTTAGAAGCA GGAAATATAGTGCAGTTTCTTTTATCTTTCCAGTCTTCTGAGATGCAAAGGGAGTTTCGAGCTCTTTTCCCAAGCGATGC TCAGGAACTTCCTTCAGCTAAAGATGGGAGCAACTACGTTCCGGCAATCAACTCTTCTGAGTATATGTATGACTTTAAAG ATCTAAGCGTTCTTAAAAAGTCTTTGAGTGAGCGCCTAGCATTTTGTGAGAAGATACCGTCACCCTCCAGTTGGAATTTT ACTAGTTCTGTAGCTAGCCACTACAAGGACTTCTCCCTTTTATTTACATTCTTCTCAAATCAACAATCTGTTATTTTACA AAACCCATTTTTATTAATAGAATTGCTACACGAGAATCCCAAGTGTCAGACTTTCTTAAAAGGTTTATTAGAGAAAGCAA TGCCGATGAGTAATTGGGCTGCGCTTTTTCGTCCTATGCTAATGGGAATGCTTTGTTCTGGCATAGCTAGAAAAAAGGAA CTTAAGATTATAGCAGAACATTTAGGAGTTCCTTTCAAAGAGATAACGCAAGCGATAGCGTCTGGAAAAATTCTGGATCT TTTATTACAACACTTATTTGATTTTTAG
Upstream 100 bases:
>100_bases AATCTTTTTTCTGATAGCCGGAGGTATAAACTTTCTCTTTTTTAATTAGTTTTGTATAATATTTTCGTCGATTTTGCTTA ACTAACTTTTTTAAAAAGAA
Downstream 100 bases:
>100_bases ATATGAACATACCCGCTCCCCAAGTACCAGTCATAGATGAGCCTGTAGTGAACAACACAAGTAGCTATGGTCTTTCATTG AAAAGTAGTTTAAGACCGAT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 515; Mature: 515
Protein sequence:
>515_residues MFNLFFFTANKETTASHELIYRKNQSFSLSPVTILCLLAISVLLLLGVVFALVGCHVLAAPLGLLVWGCAASVCSMMAIV SLMCLYKGGKPLIEPSNEEKIDPTKDLEIKDPESLKPVPVEGQSLPKERKTVSFKAKIPSIVEDDFKPYVIQSTFYHQNK VYSKPIAERMQSLEKEITTLIVDFPRALEESSKSSGSLLRGVISEIKNLFLPRFLSRKVKYSLTACLRRLGSIVEEYASS DLLILLLTKPEPLNMVTQQLIAHLNSLKTEKRKLTPHMQKLVLSINFWFYGWSLEEKCIEKIVAYDPNLLTDELKAHLEA GNIVQFLLSFQSSEMQREFRALFPSDAQELPSAKDGSNYVPAINSSEYMYDFKDLSVLKKSLSERLAFCEKIPSPSSWNF TSSVASHYKDFSLLFTFFSNQQSVILQNPFLLIELLHENPKCQTFLKGLLEKAMPMSNWAALFRPMLMGMLCSGIARKKE LKIIAEHLGVPFKEITQAIASGKILDLLLQHLFDF
Sequences:
>Translated_515_residues MFNLFFFTANKETTASHELIYRKNQSFSLSPVTILCLLAISVLLLLGVVFALVGCHVLAAPLGLLVWGCAASVCSMMAIV SLMCLYKGGKPLIEPSNEEKIDPTKDLEIKDPESLKPVPVEGQSLPKERKTVSFKAKIPSIVEDDFKPYVIQSTFYHQNK VYSKPIAERMQSLEKEITTLIVDFPRALEESSKSSGSLLRGVISEIKNLFLPRFLSRKVKYSLTACLRRLGSIVEEYASS DLLILLLTKPEPLNMVTQQLIAHLNSLKTEKRKLTPHMQKLVLSINFWFYGWSLEEKCIEKIVAYDPNLLTDELKAHLEA GNIVQFLLSFQSSEMQREFRALFPSDAQELPSAKDGSNYVPAINSSEYMYDFKDLSVLKKSLSERLAFCEKIPSPSSWNF TSSVASHYKDFSLLFTFFSNQQSVILQNPFLLIELLHENPKCQTFLKGLLEKAMPMSNWAALFRPMLMGMLCSGIARKKE LKIIAEHLGVPFKEITQAIASGKILDLLLQHLFDF >Mature_515_residues MFNLFFFTANKETTASHELIYRKNQSFSLSPVTILCLLAISVLLLLGVVFALVGCHVLAAPLGLLVWGCAASVCSMMAIV SLMCLYKGGKPLIEPSNEEKIDPTKDLEIKDPESLKPVPVEGQSLPKERKTVSFKAKIPSIVEDDFKPYVIQSTFYHQNK VYSKPIAERMQSLEKEITTLIVDFPRALEESSKSSGSLLRGVISEIKNLFLPRFLSRKVKYSLTACLRRLGSIVEEYASS DLLILLLTKPEPLNMVTQQLIAHLNSLKTEKRKLTPHMQKLVLSINFWFYGWSLEEKCIEKIVAYDPNLLTDELKAHLEA GNIVQFLLSFQSSEMQREFRALFPSDAQELPSAKDGSNYVPAINSSEYMYDFKDLSVLKKSLSERLAFCEKIPSPSSWNF TSSVASHYKDFSLLFTFFSNQQSVILQNPFLLIELLHENPKCQTFLKGLLEKAMPMSNWAALFRPMLMGMLCSGIARKKE LKIIAEHLGVPFKEITQAIASGKILDLLLQHLFDF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 58174; Mature: 58174
Theoretical pI: Translated: 8.24; Mature: 8.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.9 %Cys (Translated Protein) 2.7 %Met (Translated Protein) 4.7 %Cys+Met (Translated Protein) 1.9 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFNLFFFTANKETTASHELIYRKNQSFSLSPVTILCLLAISVLLLLGVVFALVGCHVLAA CCEEEEEECCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLGLLVWGCAASVCSMMAIVSLMCLYKGGKPLIEPSNEEKIDPTKDLEIKDPESLKPVPV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EGQSLPKERKTVSFKAKIPSIVEDDFKPYVIQSTFYHQNKVYSKPIAERMQSLEKEITTL CCCCCCCHHHCEEEHHHCCHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHH IVDFPRALEESSKSSGSLLRGVISEIKNLFLPRFLSRKVKYSLTACLRRLGSIVEEYASS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLLILLLTKPEPLNMVTQQLIAHLNSLKTEKRKLTPHMQKLVLSINFWFYGWSLEEKCIE CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEECCHHHHHHH KIVAYDPNLLTDELKAHLEAGNIVQFLLSFQSSEMQREFRALFPSDAQELPSAKDGSNYV HHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC PAINSSEYMYDFKDLSVLKKSLSERLAFCEKIPSPSSWNFTSSVASHYKDFSLLFTFFSN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC QQSVILQNPFLLIELLHENPKCQTFLKGLLEKAMPMSNWAALFRPMLMGMLCSGIARKKE CCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LKIIAEHLGVPFKEITQAIASGKILDLLLQHLFDF HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCC >Mature Secondary Structure MFNLFFFTANKETTASHELIYRKNQSFSLSPVTILCLLAISVLLLLGVVFALVGCHVLAA CCEEEEEECCCCCCCHHHHHEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PLGLLVWGCAASVCSMMAIVSLMCLYKGGKPLIEPSNEEKIDPTKDLEIKDPESLKPVPV HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EGQSLPKERKTVSFKAKIPSIVEDDFKPYVIQSTFYHQNKVYSKPIAERMQSLEKEITTL CCCCCCCHHHCEEEHHHCCHHHHCCCCCEEEEHHHHHCCHHHHHHHHHHHHHHHHHHHHH IVDFPRALEESSKSSGSLLRGVISEIKNLFLPRFLSRKVKYSLTACLRRLGSIVEEYASS HHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC DLLILLLTKPEPLNMVTQQLIAHLNSLKTEKRKLTPHMQKLVLSINFWFYGWSLEEKCIE CEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHEEECCHHHHHHH KIVAYDPNLLTDELKAHLEAGNIVQFLLSFQSSEMQREFRALFPSDAQELPSAKDGSNYV HHHHCCCCHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHCCCCCCCCCCC PAINSSEYMYDFKDLSVLKKSLSERLAFCEKIPSPSSWNFTSSVASHYKDFSLLFTFFSN CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHCC QQSVILQNPFLLIELLHENPKCQTFLKGLLEKAMPMSNWAALFRPMLMGMLCSGIARKKE CCCEEECCHHHHHHHHHCCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHH LKIIAEHLGVPFKEITQAIASGKILDLLLQHLFDF HHHHHHHHCCCHHHHHHHHHCCHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA