Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835819

GI number: 15835819

Start: 318170

End: 318667

Strand: Reverse

Name: Not Available

Synonym: CPj0284

Alternate gene names: NA

Gene position: 318667-318170 (Counterclockwise)

Preceding gene: 15835820

Following gene: 15835818

Centisome position: 25.98

GC content: 39.16

Gene sequence:

>498_bases
ATGAACATACCCGCTCCCCAAGTACCAGTCATAGATGAGCCTGTAGTGAACAACACAAGTAGCTATGGTCTTTCATTGAA
AAGTAGTTTAAGACCGATTACTTATTTGATTTTAGCTATCTTAGCTATAGCCACACTGATGTCTGTTCTCTACTTTTGTG
GCATCATTAGTGTTGGGACGTTTGTTTTGGGCATGCTGATCCCTCTATCGGTCTGCTCTGTTCTTTGCGTTGCCTATTTA
TTCTATCAGCAATCTTCTATAGAAAAGACTAAGGTCTTTTCTATAACCAGTCCTTCAGTATTTTTCTCTGATGAGGATCT
TAATTTACTCTTAGGTCGAGAAGAAGATTCAGTGTCTGCAATTGATGAACTTCTTAAGAACTTTCCAGCTGATGATTTCC
GTAGGCCGAAGATGCTTCCTTATTCAAATTTTCTAGATGAGCAGGGAAGGCCTAATGAGAGTAGGGAAGAAGACTCTCAT
ACTTCCAAGATCTTATAA

Upstream 100 bases:

>100_bases
TAGCAGAACATTTAGGAGTTCCTTTCAAAGAGATAACGCAAGCGATAGCGTCTGGAAAAATTCTGGATCTTTTATTACAA
CACTTATTTGATTTTTAGAT

Downstream 100 bases:

>100_bases
AAAATGCTGTTGCTAAGATTATTAGCTTTCGAAAATCACCCCCTAACCCAGTGAAGCTTCTTATAAAATTTGCGAAGAAA
GATTTAAAGAATTCCTCAAT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 165; Mature: 165

Protein sequence:

>165_residues
MNIPAPQVPVIDEPVVNNTSSYGLSLKSSLRPITYLILAILAIATLMSVLYFCGIISVGTFVLGMLIPLSVCSVLCVAYL
FYQQSSIEKTKVFSITSPSVFFSDEDLNLLLGREEDSVSAIDELLKNFPADDFRRPKMLPYSNFLDEQGRPNESREEDSH
TSKIL

Sequences:

>Translated_165_residues
MNIPAPQVPVIDEPVVNNTSSYGLSLKSSLRPITYLILAILAIATLMSVLYFCGIISVGTFVLGMLIPLSVCSVLCVAYL
FYQQSSIEKTKVFSITSPSVFFSDEDLNLLLGREEDSVSAIDELLKNFPADDFRRPKMLPYSNFLDEQGRPNESREEDSH
TSKIL
>Mature_165_residues
MNIPAPQVPVIDEPVVNNTSSYGLSLKSSLRPITYLILAILAIATLMSVLYFCGIISVGTFVLGMLIPLSVCSVLCVAYL
FYQQSSIEKTKVFSITSPSVFFSDEDLNLLLGREEDSVSAIDELLKNFPADDFRRPKMLPYSNFLDEQGRPNESREEDSH
TSKIL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 18331; Mature: 18331

Theoretical pI: Translated: 4.36; Mature: 4.36

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
4.2 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
4.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNIPAPQVPVIDEPVVNNTSSYGLSLKSSLRPITYLILAILAIATLMSVLYFCGIISVGT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVLGMLIPLSVCSVLCVAYLFYQQSSIEKTKVFSITSPSVFFSDEDLNLLLGREEDSVSA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCEEECCCCCEEEECCCCCHHHH
IDELLKNFPADDFRRPKMLPYSNFLDEQGRPNESREEDSHTSKIL
HHHHHHHCCCCHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCC
>Mature Secondary Structure
MNIPAPQVPVIDEPVVNNTSSYGLSLKSSLRPITYLILAILAIATLMSVLYFCGIISVGT
CCCCCCCCCCCCCCCCCCCCCCCCCHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
FVLGMLIPLSVCSVLCVAYLFYQQSSIEKTKVFSITSPSVFFSDEDLNLLLGREEDSVSA
HHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHEEEECCCCEEECCCCCEEEECCCCCHHHH
IDELLKNFPADDFRRPKMLPYSNFLDEQGRPNESREEDSHTSKIL
HHHHHHHCCCCHHCCCCCCCCHHHHCCCCCCCCCHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA