Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835680

GI number: 15835680

Start: 180488

End: 182083

Strand: Direct

Name: Not Available

Synonym: CPj0145

Alternate gene names: NA

Gene position: 180488-182083 (Clockwise)

Preceding gene: 15835679

Following gene: 15835681

Centisome position: 14.71

GC content: 39.47

Gene sequence:

>1596_bases
ATGTTTAAGAGCTTTATAGTAAGGTATATGTTTGTAGGTGGCCTTGTTTCATTCTTGCTTCCTATCCCCGACTTGGAATG
TGCGAATAATGTAACAAAAACTTATGATAAGAAAGCTTCTGTTATATCCAGAGATCTTAAGCTACAGGAAGACTGCCAGA
AGTTTTGGAATCTTGATCCGTATAAACTAGAAAGTCTTTGTGCTTATCAAGTGCTTTACCATGATGACTATAGTTCCAAG
AGAATACGAGAGCTTTTTCCTCAAATCCAAAAAGACGAAGTCCCCATATTTGCAACAATGATTCTTACTTTAGGGAAAGT
AGACCGTGGCTTTTCTCCTGAAGAAATTTCATTGATCCAAAAACTTTCTTACCCAGGCCTCTCATTGGCTTCTTTGAGAG
GGTCTACAGAAATAGACCCGAATACAGATTTGGCTCGTGCTTTAGTAGTGTCGGAGTTTTCTGGAGATTTAGGGAAGAAC
CGAGCTGACTACTATAGCAATTGCCTTGATATTTTGGCGTTGCGTATTCATGCAGAACGTCAAAGGTATTTAGATCAGTC
TCCTTGTGTTCCTGGAACCTCCGAGTTTCATAAGGCAACTATAGAAGCTATTAATACGATACTCTTCTATGAAGAAGCAG
TTCGTTATCCTTCGAAGAAAGAAATGTTTTCTGATGAATTTTCTTTTCTTTCTTCAGTTACAGATAGAAAATTCGGCGTA
TGTTTAGGGGTCTCTTCTCTTTATTTCTCTTTGTCACAGCGCTTAGATTTACCTTTAGAGGCTGTGACGCCTCCTGGGCA
TATCTACTTACGTTATCAGGGTGGTGAGGTGAACATTGAGACTACAGCTGGAGGGCGCCATCTTCCTACAGCAAGTTACT
GTGATTGTCTAGATTTAGAAGACCTTCAGGTGCGTACTCCTGAAGAAATGATAGGGCTTACTTTTATGAACCAGGGCTCT
TTTGCTCTGCAGAAGAAAAAGTATAAGGAAGCGGAAGAGGCTTATAAAAAGGCTCAAGAGTATTTGGGAGACGAGGAACT
ACAAGAGCTTTTGGGGTTTGTTCAAATCCTAGGAGGAAAGAAAAAAGAGGGGAAATCTTTGATTGGTAAAAGTCCTCGCG
CTTCCCAGAAAGGATCGGTGGCTTATGACTACCTTAAAGGTAGAATCAACATTCCAACACTAGCTCTTTTATTTTCTTAT
CCAGGATCCAATTATGAAGAGATAGCTTCTTATGAAGAAGAACTCAAAAAGGCTATGAAAAGCTCGATGCCATGTTGTGA
AGGACAGCGTCGTCTTGCTTCAGTAGCATTTCATTTGGGGAAGACAGCGGAGGCGGTTGCTCTTTTAGAAAAATGCGTTG
AGGATATCCCTAATGATCTTTCTCTTCATTTAAGGTTATGTAAAATCCTATGTGATCGACATGAGTATACAAAGGCTTTG
AAATACTTCATAATTGCGGAAAGACTTATGGAGGATCAGGGATTTCTTAAAAAAGACAATCGTTCGTTCGCTTTATTTTA
TGAGGTGAAAAAAATCATATCCAAAGTGGCTCCTCAAAAAGCTAACACCTTGCTTTTAATGGAGTCTGAAAGATAA

Upstream 100 bases:

>100_bases
TCATAAAAAAACTAGGACGATAAAGTGTGTGTAGGATTAGAATTGTGCGGCAAGCTTCATTTGGCTAAACAAGAGCAGTC
ACAGAAATTTAAGAAGTCCT

Downstream 100 bases:

>100_bases
CTTGATCAGTTCTTTCTGTATTGCTCTTATTTATAACATGTTATAACATTGCAAGTGTTAATTTTTAACAGATCTTTATT
TGTTGCAATATTTTTTTAAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 531; Mature: 531

Protein sequence:

>531_residues
MFKSFIVRYMFVGGLVSFLLPIPDLECANNVTKTYDKKASVISRDLKLQEDCQKFWNLDPYKLESLCAYQVLYHDDYSSK
RIRELFPQIQKDEVPIFATMILTLGKVDRGFSPEEISLIQKLSYPGLSLASLRGSTEIDPNTDLARALVVSEFSGDLGKN
RADYYSNCLDILALRIHAERQRYLDQSPCVPGTSEFHKATIEAINTILFYEEAVRYPSKKEMFSDEFSFLSSVTDRKFGV
CLGVSSLYFSLSQRLDLPLEAVTPPGHIYLRYQGGEVNIETTAGGRHLPTASYCDCLDLEDLQVRTPEEMIGLTFMNQGS
FALQKKKYKEAEEAYKKAQEYLGDEELQELLGFVQILGGKKKEGKSLIGKSPRASQKGSVAYDYLKGRINIPTLALLFSY
PGSNYEEIASYEEELKKAMKSSMPCCEGQRRLASVAFHLGKTAEAVALLEKCVEDIPNDLSLHLRLCKILCDRHEYTKAL
KYFIIAERLMEDQGFLKKDNRSFALFYEVKKIISKVAPQKANTLLLMESER

Sequences:

>Translated_531_residues
MFKSFIVRYMFVGGLVSFLLPIPDLECANNVTKTYDKKASVISRDLKLQEDCQKFWNLDPYKLESLCAYQVLYHDDYSSK
RIRELFPQIQKDEVPIFATMILTLGKVDRGFSPEEISLIQKLSYPGLSLASLRGSTEIDPNTDLARALVVSEFSGDLGKN
RADYYSNCLDILALRIHAERQRYLDQSPCVPGTSEFHKATIEAINTILFYEEAVRYPSKKEMFSDEFSFLSSVTDRKFGV
CLGVSSLYFSLSQRLDLPLEAVTPPGHIYLRYQGGEVNIETTAGGRHLPTASYCDCLDLEDLQVRTPEEMIGLTFMNQGS
FALQKKKYKEAEEAYKKAQEYLGDEELQELLGFVQILGGKKKEGKSLIGKSPRASQKGSVAYDYLKGRINIPTLALLFSY
PGSNYEEIASYEEELKKAMKSSMPCCEGQRRLASVAFHLGKTAEAVALLEKCVEDIPNDLSLHLRLCKILCDRHEYTKAL
KYFIIAERLMEDQGFLKKDNRSFALFYEVKKIISKVAPQKANTLLLMESER
>Mature_531_residues
MFKSFIVRYMFVGGLVSFLLPIPDLECANNVTKTYDKKASVISRDLKLQEDCQKFWNLDPYKLESLCAYQVLYHDDYSSK
RIRELFPQIQKDEVPIFATMILTLGKVDRGFSPEEISLIQKLSYPGLSLASLRGSTEIDPNTDLARALVVSEFSGDLGKN
RADYYSNCLDILALRIHAERQRYLDQSPCVPGTSEFHKATIEAINTILFYEEAVRYPSKKEMFSDEFSFLSSVTDRKFGV
CLGVSSLYFSLSQRLDLPLEAVTPPGHIYLRYQGGEVNIETTAGGRHLPTASYCDCLDLEDLQVRTPEEMIGLTFMNQGS
FALQKKKYKEAEEAYKKAQEYLGDEELQELLGFVQILGGKKKEGKSLIGKSPRASQKGSVAYDYLKGRINIPTLALLFSY
PGSNYEEIASYEEELKKAMKSSMPCCEGQRRLASVAFHLGKTAEAVALLEKCVEDIPNDLSLHLRLCKILCDRHEYTKAL
KYFIIAERLMEDQGFLKKDNRSFALFYEVKKIISKVAPQKANTLLLMESER

Specific function: Unknown

COG id: COG2912

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 60249; Mature: 60249

Theoretical pI: Translated: 6.52; Mature: 6.52

Prosite motif: PS50293 TPR_REGION L=RR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
4.3 %Cys+Met (Translated Protein)
2.4 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFKSFIVRYMFVGGLVSFLLPIPDLECANNVTKTYDKKASVISRDLKLQEDCQKFWNLDP
CHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCH
YKLESLCAYQVLYHDDYSSKRIRELFPQIQKDEVPIFATMILTLGKVDRGFSPEEISLIQ
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
KLSYPGLSLASLRGSTEIDPNTDLARALVVSEFSGDLGKNRADYYSNCLDILALRIHAER
HHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QRYLDQSPCVPGTSEFHKATIEAINTILFYEEAVRYPSKKEMFSDEFSFLSSVTDRKFGV
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHH
CLGVSSLYFSLSQRLDLPLEAVTPPGHIYLRYQGGEVNIETTAGGRHLPTASYCDCLDLE
HHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCC
DLQVRTPEEMIGLTFMNQGSFALQKKKYKEAEEAYKKAQEYLGDEELQELLGFVQILGGK
CCCCCCHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
KKEGKSLIGKSPRASQKGSVAYDYLKGRINIPTLALLFSYPGSNYEEIASYEEELKKAMK
CCCCHHHHCCCCCCCCCCCEEHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
SSMPCCEGQRRLASVAFHLGKTAEAVALLEKCVEDIPNDLSLHLRLCKILCDRHEYTKAL
HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
KYFIIAERLMEDQGFLKKDNRSFALFYEVKKIISKVAPQKANTLLLMESER
HHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCC
>Mature Secondary Structure
MFKSFIVRYMFVGGLVSFLLPIPDLECANNVTKTYDKKASVISRDLKLQEDCQKFWNLDP
CHHHHHHHHHHHHHHHHHHHCCCCCHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHHCCCH
YKLESLCAYQVLYHDDYSSKRIRELFPQIQKDEVPIFATMILTLGKVDRGFSPEEISLIQ
HHHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCCCCHHHHHHHH
KLSYPGLSLASLRGSTEIDPNTDLARALVVSEFSGDLGKNRADYYSNCLDILALRIHAER
HHCCCCCCHHHCCCCCCCCCCHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHH
QRYLDQSPCVPGTSEFHKATIEAINTILFYEEAVRYPSKKEMFSDEFSFLSSVTDRKFGV
HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHH
CLGVSSLYFSLSQRLDLPLEAVTPPGHIYLRYQGGEVNIETTAGGRHLPTASYCDCLDLE
HHHHHHHHHHHHHHCCCCHHCCCCCCEEEEEEECCEEEEEECCCCCCCCCCCCCCCCCCC
DLQVRTPEEMIGLTFMNQGSFALQKKKYKEAEEAYKKAQEYLGDEELQELLGFVQILGGK
CCCCCCHHHHHCEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCC
KKEGKSLIGKSPRASQKGSVAYDYLKGRINIPTLALLFSYPGSNYEEIASYEEELKKAMK
CCCCHHHHCCCCCCCCCCCEEHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHH
SSMPCCEGQRRLASVAFHLGKTAEAVALLEKCVEDIPNDLSLHLRLCKILCDRHEYTKAL
HCCCCCHHHHHHHHHHHHHCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHH
KYFIIAERLMEDQGFLKKDNRSFALFYEVKKIISKVAPQKANTLLLMESER
HHHHHHHHHHHHCCCCCCCCCCEEHHHHHHHHHHHHCCCCCCEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA