Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835667

GI number: 15835667

Start: 165298

End: 166275

Strand: Direct

Name: Not Available

Synonym: CPj0132

Alternate gene names: NA

Gene position: 165298-166275 (Clockwise)

Preceding gene: 15835666

Following gene: 15835679

Centisome position: 13.48

GC content: 38.45

Gene sequence:

>978_bases
ATGATCGAGTTTGCTTTTGTTCCTCATACCTCCGTGACAGCGGATCGGATTGAGGATCGCATGGCCTGTCGCATGAACAA
GTTGTCTACTTTAGCAATTACAAGTCTTTGTGTATTGATCAGTTCAGTTTGTATTATGATTGGGATTTTATGCATTTCTG
GAACGGTTGGGACCTATGCATTTGTTGTAGGAATTATTTTTTCTGTGCTTGCTTTGGTAGCATGTGTTTTCTTTCTTTAT
TTCTTTTATTTTTCTTCTGAGGAATTTAAGTGTGCTTCTTCGCAGGAGTTTCGTTTTTTGCCTATACCAGCTGTGGTTTC
TGCATTGCGTTCCTATGAATACATTTCTCAGGACGCTATCAATGACGTTATAAAAGATACGATGCAGTTGTCTACCCTTT
CTTCTCTTTTAGATCCCGAAGCTTTTTTCTTAGAATTTCCTTATTTTAACTCTTTGATAGTGAATCATTCGATGAAGGAA
GCGGATCGTTTGTCTCGAGAGGCTTTTTTGATTTTATTAGGTGAGATTACTTGGAAGGATTGTGAAACAAAAATTTTGCC
ATGGTTGAAAGATCCTAATATCACTCCTGATGATTTCTGGAAGCTATTAAAAGACCATTTCGATTTAAAGGACTTTAAGA
AGAGGATCGCCACTTGGATACGGAAGGCCTATCCAGAAATTAGATTACCGAAGAAGCATTGTTTAGATAAGTCTATCTAT
AAGGGGTGTTGTAAGTTTTTATTACTTGCTGAGAATGATGTGCAATATCAGAGGTTATTACATAAGGTCTGTTATTTCTC
TGGGGAGTTTCCTGCCATGGTTTTAGGTTTGGGAAGTGAAGTGCCTATGGTGTTAGGACTCCCTAAGGTTCCCAAGGATC
TTACCTGGGAGATGTTTATGGAAAATATGCCTGTTCTTCTGCAAAGCAAAAGAGAGGGGCATTGGAAAATCTCCTTGGAA
GACGTAGCCTCTCTTTAA

Upstream 100 bases:

>100_bases
GGAATGGGGTGAGTTTATTTCGGCATGTGAGAAGGCTCTTTTAAAGAATCCGCAAGGAATTTCCATTAAGGATCTAAAAC
AATTTTTAGTGAGGTAATCT

Downstream 100 bases:

>100_bases
TGAAAGAAGAGTCCTCGGATGAAGCCTATGATTTCTTCTGTAGGTGTTCCAGGGGTATTGATATCGTTAAGACGGTCTTG
GAATTGTGGATACGATGAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 325; Mature: 325

Protein sequence:

>325_residues
MIEFAFVPHTSVTADRIEDRMACRMNKLSTLAITSLCVLISSVCIMIGILCISGTVGTYAFVVGIIFSVLALVACVFFLY
FFYFSSEEFKCASSQEFRFLPIPAVVSALRSYEYISQDAINDVIKDTMQLSTLSSLLDPEAFFLEFPYFNSLIVNHSMKE
ADRLSREAFLILLGEITWKDCETKILPWLKDPNITPDDFWKLLKDHFDLKDFKKRIATWIRKAYPEIRLPKKHCLDKSIY
KGCCKFLLLAENDVQYQRLLHKVCYFSGEFPAMVLGLGSEVPMVLGLPKVPKDLTWEMFMENMPVLLQSKREGHWKISLE
DVASL

Sequences:

>Translated_325_residues
MIEFAFVPHTSVTADRIEDRMACRMNKLSTLAITSLCVLISSVCIMIGILCISGTVGTYAFVVGIIFSVLALVACVFFLY
FFYFSSEEFKCASSQEFRFLPIPAVVSALRSYEYISQDAINDVIKDTMQLSTLSSLLDPEAFFLEFPYFNSLIVNHSMKE
ADRLSREAFLILLGEITWKDCETKILPWLKDPNITPDDFWKLLKDHFDLKDFKKRIATWIRKAYPEIRLPKKHCLDKSIY
KGCCKFLLLAENDVQYQRLLHKVCYFSGEFPAMVLGLGSEVPMVLGLPKVPKDLTWEMFMENMPVLLQSKREGHWKISLE
DVASL
>Mature_325_residues
MIEFAFVPHTSVTADRIEDRMACRMNKLSTLAITSLCVLISSVCIMIGILCISGTVGTYAFVVGIIFSVLALVACVFFLY
FFYFSSEEFKCASSQEFRFLPIPAVVSALRSYEYISQDAINDVIKDTMQLSTLSSLLDPEAFFLEFPYFNSLIVNHSMKE
ADRLSREAFLILLGEITWKDCETKILPWLKDPNITPDDFWKLLKDHFDLKDFKKRIATWIRKAYPEIRLPKKHCLDKSIY
KGCCKFLLLAENDVQYQRLLHKVCYFSGEFPAMVLGLGSEVPMVLGLPKVPKDLTWEMFMENMPVLLQSKREGHWKISLE
DVASL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential)

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): Y132_CHLPN (Q9Z949)

Other databases:

- EMBL:   AE001363
- EMBL:   AE002161
- EMBL:   BA000008
- EMBL:   AE009440
- PIR:   D86507
- PIR:   E72116
- PIR:   H81553
- RefSeq:   NP_224340.1
- RefSeq:   NP_300191.1
- RefSeq:   NP_445182.1
- RefSeq:   NP_876409.1
- GeneID:   1466816
- GeneID:   894834
- GeneID:   918918
- GeneID:   963245
- GenomeReviews:   AE001363_GR
- GenomeReviews:   AE002161_GR
- GenomeReviews:   AE009440_GR
- GenomeReviews:   BA000008_GR
- KEGG:   cpa:CP0640
- KEGG:   cpj:CPj0132
- KEGG:   cpn:CPn0132
- KEGG:   cpt:CpB0133
- TIGR:   CP_0640
- OMA:   KRIATWI
- ProtClustDB:   CLSK337289
- BioCyc:   CPNE115711:CP_0640-MONOMER
- BioCyc:   CPNE115713:CPN0132-MONOMER
- BioCyc:   CPNE138677:CPJ0132-MONOMER
- BioCyc:   CPNE182082:CPB0133-MONOMER

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 37293; Mature: 37293

Theoretical pI: Translated: 6.50; Mature: 6.50

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xaeb6588)-; HASH(0xba53e10)-; HASH(0xbc6d1a0)-;

Cys/Met content:

3.4 %Cys     (Translated Protein)
3.4 %Met     (Translated Protein)
6.8 %Cys+Met (Translated Protein)
3.4 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
6.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEFAFVPHTSVTADRIEDRMACRMNKLSTLAITSLCVLISSVCIMIGILCISGTVGTYA
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
FVVGIIFSVLALVACVFFLYFFYFSSEEFKCASSQEFRFLPIPAVVSALRSYEYISQDAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHH
NDVIKDTMQLSTLSSLLDPEAFFLEFPYFNSLIVNHSMKEADRLSREAFLILLGEITWKD
HHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCC
CETKILPWLKDPNITPDDFWKLLKDHFDLKDFKKRIATWIRKAYPEIRLPKKHCLDKSIY
CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KGCCKFLLLAENDVQYQRLLHKVCYFSGEFPAMVLGLGSEVPMVLGLPKVPKDLTWEMFM
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHEEECCCCCCCEECCCCCCCHHHHHHHH
ENMPVLLQSKREGHWKISLEDVASL
CCCCHHHHCCCCCCEEEEHHHHHCH
>Mature Secondary Structure
MIEFAFVPHTSVTADRIEDRMACRMNKLSTLAITSLCVLISSVCIMIGILCISGTVGTYA
CCEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
FVVGIIFSVLALVACVFFLYFFYFSSEEFKCASSQEFRFLPIPAVVSALRSYEYISQDAI
HHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEECHHHHHHHHHHHHHHHHHHH
NDVIKDTMQLSTLSSLLDPEAFFLEFPYFNSLIVNHSMKEADRLSREAFLILLGEITWKD
HHHHHHHHHHHHHHHHHCCHHHEEECCCHHHHHHHCCHHHHHHHHHHHHHHEEECCCCCC
CETKILPWLKDPNITPDDFWKLLKDHFDLKDFKKRIATWIRKAYPEIRLPKKHCLDKSIY
CCCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHH
KGCCKFLLLAENDVQYQRLLHKVCYFSGEFPAMVLGLGSEVPMVLGLPKVPKDLTWEMFM
HHHHHHHHHCCCCHHHHHHHHHHHHCCCCCHHHEEECCCCCCCEECCCCCCCHHHHHHHH
ENMPVLLQSKREGHWKISLEDVASL
CCCCHHHHCCCCCCEEEEHHHHHCH

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 10192388; 10684935; 10871362