| Definition | Chlamydophila pneumoniae J138, complete genome. |
|---|---|
| Accession | NC_002491 |
| Length | 1,226,565 |
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Identifier: 15835644
GI number: 15835644
Start: 137011
End: 137568
Strand: Reverse
Name: Not Available
Synonym: CPj0108
Alternate gene names: NA
Gene position: 137568-137011 (Counterclockwise)
Preceding gene: 15835646
Following gene: 15835643
Centisome position: 11.22
GC content: 39.78
Gene sequence:
>558_bases ATGAGCATTTTTAATGAAGAAGTCTTTATAATTAGCCATCGGCACACGCCTCTGGGTCAAACCTCAACCGCACTAAGAAA TACTCCTTTAGTGAATCCCTTACACCGCACAAATTTACAACGTATTGCAAGCTATATTCCGATATTTAGTACATTTATAG GTATCAAAACCTTAAAAGGAATTAGTTCTCTTCAATATTCTATGGTTCTAATGACAGGGAACTTCTCTTCAGTGTGTAAA ACATTACCCTGTCCTGAGATCTATGAGGAACTTCCTAAAGTTAGAAAAGAAGCTTGGCTAGAAATTTTCGGCATTAAAGC TCTGTATTACCTGGTCTTAGGAGTCATTAAGATTATAAAGTTGATCGTTCGGTATCTTTGTCCTTGCTGCCGTCCTCCAG AGCCAAGAGAACCTCAAAACCCCTTAACACCTACTCCCCTTGACATGGGGCAGCAAATAGACGCCATATTTTCTACTCCT ACCTCTCCAACAGGATTCAAAGATCCGTTCCTGGATGATCTGTTACAAGAAGATAAAAAAAAAGCCCCCCACCTGTAA
Upstream 100 bases:
>100_bases CCATTAAAAAACCCTTCTAGATTTCATAGAAATAGAAAAGAAAGATAAGTTGTTTTATAATTCTTAATGAAAAAATTTAT TTCATTATAAGGCGATTCTT
Downstream 100 bases:
>100_bases CACCTAAAGAAATACCGACACAACCTAAGCCACCCATACCTCAGAGACCAGAGGTCTCCCCTACACCTACAGATCACATT GTACCTGGAAGTATAGAAGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 184
Protein sequence:
>185_residues MSIFNEEVFIISHRHTPLGQTSTALRNTPLVNPLHRTNLQRIASYIPIFSTFIGIKTLKGISSLQYSMVLMTGNFSSVCK TLPCPEIYEELPKVRKEAWLEIFGIKALYYLVLGVIKIIKLIVRYLCPCCRPPEPREPQNPLTPTPLDMGQQIDAIFSTP TSPTGFKDPFLDDLLQEDKKKAPHL
Sequences:
>Translated_185_residues MSIFNEEVFIISHRHTPLGQTSTALRNTPLVNPLHRTNLQRIASYIPIFSTFIGIKTLKGISSLQYSMVLMTGNFSSVCK TLPCPEIYEELPKVRKEAWLEIFGIKALYYLVLGVIKIIKLIVRYLCPCCRPPEPREPQNPLTPTPLDMGQQIDAIFSTP TSPTGFKDPFLDDLLQEDKKKAPHL >Mature_184_residues SIFNEEVFIISHRHTPLGQTSTALRNTPLVNPLHRTNLQRIASYIPIFSTFIGIKTLKGISSLQYSMVLMTGNFSSVCKT LPCPEIYEELPKVRKEAWLEIFGIKALYYLVLGVIKIIKLIVRYLCPCCRPPEPREPQNPLTPTPLDMGQQIDAIFSTPT SPTGFKDPFLDDLLQEDKKKAPHL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20956; Mature: 20825
Theoretical pI: Translated: 8.72; Mature: 8.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.7 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 4.9 %Cys+Met (Translated Protein) 2.7 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 4.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSIFNEEVFIISHRHTPLGQTSTALRNTPLVNPLHRTNLQRIASYIPIFSTFIGIKTLKG CCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSLQYSMVLMTGNFSSVCKTLPCPEIYEELPKVRKEAWLEIFGIKALYYLVLGVIKIIK HHHHHHHHEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIVRYLCPCCRPPEPREPQNPLTPTPLDMGQQIDAIFSTPTSPTGFKDPFLDDLLQEDKK HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH KAPHL CCCCC >Mature Secondary Structure SIFNEEVFIISHRHTPLGQTSTALRNTPLVNPLHRTNLQRIASYIPIFSTFIGIKTLKG CCCCCCEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH ISSLQYSMVLMTGNFSSVCKTLPCPEIYEELPKVRKEAWLEIFGIKALYYLVLGVIKIIK HHHHHHHHEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LIVRYLCPCCRPPEPREPQNPLTPTPLDMGQQIDAIFSTPTSPTGFKDPFLDDLLQEDKK HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH KAPHL CCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA