Definition Chlamydophila pneumoniae J138, complete genome.
Accession NC_002491
Length 1,226,565

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Identifier: 15835644

GI number: 15835644

Start: 137011

End: 137568

Strand: Reverse

Name: Not Available

Synonym: CPj0108

Alternate gene names: NA

Gene position: 137568-137011 (Counterclockwise)

Preceding gene: 15835646

Following gene: 15835643

Centisome position: 11.22

GC content: 39.78

Gene sequence:

>558_bases
ATGAGCATTTTTAATGAAGAAGTCTTTATAATTAGCCATCGGCACACGCCTCTGGGTCAAACCTCAACCGCACTAAGAAA
TACTCCTTTAGTGAATCCCTTACACCGCACAAATTTACAACGTATTGCAAGCTATATTCCGATATTTAGTACATTTATAG
GTATCAAAACCTTAAAAGGAATTAGTTCTCTTCAATATTCTATGGTTCTAATGACAGGGAACTTCTCTTCAGTGTGTAAA
ACATTACCCTGTCCTGAGATCTATGAGGAACTTCCTAAAGTTAGAAAAGAAGCTTGGCTAGAAATTTTCGGCATTAAAGC
TCTGTATTACCTGGTCTTAGGAGTCATTAAGATTATAAAGTTGATCGTTCGGTATCTTTGTCCTTGCTGCCGTCCTCCAG
AGCCAAGAGAACCTCAAAACCCCTTAACACCTACTCCCCTTGACATGGGGCAGCAAATAGACGCCATATTTTCTACTCCT
ACCTCTCCAACAGGATTCAAAGATCCGTTCCTGGATGATCTGTTACAAGAAGATAAAAAAAAAGCCCCCCACCTGTAA

Upstream 100 bases:

>100_bases
CCATTAAAAAACCCTTCTAGATTTCATAGAAATAGAAAAGAAAGATAAGTTGTTTTATAATTCTTAATGAAAAAATTTAT
TTCATTATAAGGCGATTCTT

Downstream 100 bases:

>100_bases
CACCTAAAGAAATACCGACACAACCTAAGCCACCCATACCTCAGAGACCAGAGGTCTCCCCTACACCTACAGATCACATT
GTACCTGGAAGTATAGAAGC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 185; Mature: 184

Protein sequence:

>185_residues
MSIFNEEVFIISHRHTPLGQTSTALRNTPLVNPLHRTNLQRIASYIPIFSTFIGIKTLKGISSLQYSMVLMTGNFSSVCK
TLPCPEIYEELPKVRKEAWLEIFGIKALYYLVLGVIKIIKLIVRYLCPCCRPPEPREPQNPLTPTPLDMGQQIDAIFSTP
TSPTGFKDPFLDDLLQEDKKKAPHL

Sequences:

>Translated_185_residues
MSIFNEEVFIISHRHTPLGQTSTALRNTPLVNPLHRTNLQRIASYIPIFSTFIGIKTLKGISSLQYSMVLMTGNFSSVCK
TLPCPEIYEELPKVRKEAWLEIFGIKALYYLVLGVIKIIKLIVRYLCPCCRPPEPREPQNPLTPTPLDMGQQIDAIFSTP
TSPTGFKDPFLDDLLQEDKKKAPHL
>Mature_184_residues
SIFNEEVFIISHRHTPLGQTSTALRNTPLVNPLHRTNLQRIASYIPIFSTFIGIKTLKGISSLQYSMVLMTGNFSSVCKT
LPCPEIYEELPKVRKEAWLEIFGIKALYYLVLGVIKIIKLIVRYLCPCCRPPEPREPQNPLTPTPLDMGQQIDAIFSTPT
SPTGFKDPFLDDLLQEDKKKAPHL

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 20956; Mature: 20825

Theoretical pI: Translated: 8.72; Mature: 8.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.7 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.7 %Cys     (Mature Protein)
1.6 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSIFNEEVFIISHRHTPLGQTSTALRNTPLVNPLHRTNLQRIASYIPIFSTFIGIKTLKG
CCCCCCCEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISSLQYSMVLMTGNFSSVCKTLPCPEIYEELPKVRKEAWLEIFGIKALYYLVLGVIKIIK
HHHHHHHHEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVRYLCPCCRPPEPREPQNPLTPTPLDMGQQIDAIFSTPTSPTGFKDPFLDDLLQEDKK
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
KAPHL
CCCCC
>Mature Secondary Structure 
SIFNEEVFIISHRHTPLGQTSTALRNTPLVNPLHRTNLQRIASYIPIFSTFIGIKTLKG
CCCCCCEEEEECCCCCCCCHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
ISSLQYSMVLMTGNFSSVCKTLPCPEIYEELPKVRKEAWLEIFGIKALYYLVLGVIKIIK
HHHHHHHHEEEECCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LIVRYLCPCCRPPEPREPQNPLTPTPLDMGQQIDAIFSTPTSPTGFKDPFLDDLLQEDKK
HHHHHHCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHH
KAPHL
CCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA