| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15835216
GI number: 15835216
Start: 715441
End: 715893
Strand: Direct
Name: Not Available
Synonym: TC0599
Alternate gene names: NA
Gene position: 715441-715893 (Clockwise)
Preceding gene: 15835215
Following gene: 15835221
Centisome position: 66.68
GC content: 36.87
Gene sequence:
>453_bases ATGACACTAACCACCCCACCATCTGAACATAAGACCTGCTTAGCAAAACAAGAAAGAGCTTTAGCGCTTCTCTTTCCAAA AAACTTTGTTAAAGATAATTTGTATAAACAGCTCTTACAAATTGGCCGCACAGCTAAACCTTTCCCTAAAGAGTTTTTAA CAAAAGAAAATTTAGTTTTAGGCTGCCAAAACGACCTCTATCTTCATAGTGAATTCAGAGATAATGCATTATTTTTTTTC ACCTATACTGAAGCCTTGATTTCTTCCGGAATCGCAGTACTGTTTTCTGATATCTATTCGGGAGAAACTCCTGAAACTAT CCTAACCTGCAAACCCTTATTTTTCGAAAAATTAAGCGAGCACTTATCTATGGGAAGGTCTCATGGAGGAGAGTCATTGT TCTTAAACATGCAGCGCATAGCTGTTCAGTATTTAACTCGAAAAACCTTGTAA
Upstream 100 bases:
>100_bases AGAACCCTCAAACGGCAATTTCCATCCTCAATAATAAAATTTCCCAATTAAACCAATCGCTTGCTCAACTTTACGACTGT CCAACACGAGTTATTGAACA
Downstream 100 bases:
>100_bases CCAAAGAGCCTAACCAATGGTTCTCACTGGCTAGGCTCCCTGTACCCATCAAAAAAAATTTAATTTCCACGACGAGAATT TCTTACCAGTCGGAATGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: Cysteine Desulfurase Sulfur Acceptor Subunit CsdE; SufE Fe/S-Cluster-Related Protein; Fe-S Metabolism Associated Domain Family Protein; Cysteine Desulfuration Protein SufE
Number of amino acids: Translated: 150; Mature: 149
Protein sequence:
>150_residues MTLTTPPSEHKTCLAKQERALALLFPKNFVKDNLYKQLLQIGRTAKPFPKEFLTKENLVLGCQNDLYLHSEFRDNALFFF TYTEALISSGIAVLFSDIYSGETPETILTCKPLFFEKLSEHLSMGRSHGGESLFLNMQRIAVQYLTRKTL
Sequences:
>Translated_150_residues MTLTTPPSEHKTCLAKQERALALLFPKNFVKDNLYKQLLQIGRTAKPFPKEFLTKENLVLGCQNDLYLHSEFRDNALFFF TYTEALISSGIAVLFSDIYSGETPETILTCKPLFFEKLSEHLSMGRSHGGESLFLNMQRIAVQYLTRKTL >Mature_149_residues TLTTPPSEHKTCLAKQERALALLFPKNFVKDNLYKQLLQIGRTAKPFPKEFLTKENLVLGCQNDLYLHSEFRDNALFFFT YTEALISSGIAVLFSDIYSGETPETILTCKPLFFEKLSEHLSMGRSHGGESLFLNMQRIAVQYLTRKTL
Specific function: Unknown
COG id: COG2166
COG function: function code R; SufE protein probably involved in Fe-S center assembly
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17157; Mature: 17026
Theoretical pI: Translated: 8.47; Mature: 8.47
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 4.0 %Cys+Met (Translated Protein) 2.0 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLTTPPSEHKTCLAKQERALALLFPKNFVKDNLYKQLLQIGRTAKPFPKEFLTKENLVL CCCCCCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEE GCQNDLYLHSEFRDNALFFFTYTEALISSGIAVLFSDIYSGETPETILTCKPLFFEKLSE ECCCCEEEECCCCCCEEEEEEHHHHHHHCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHH HLSMGRSHGGESLFLNMQRIAVQYLTRKTL HHHHHHCCCCCCEEHHHHHHHHHHHHHHCC >Mature Secondary Structure TLTTPPSEHKTCLAKQERALALLFPKNFVKDNLYKQLLQIGRTAKPFPKEFLTKENLVL CCCCCCCHHHHHHHHHCCEEEEECCHHHHHHHHHHHHHHHCCCCCCCCHHHHCCCCEEE GCQNDLYLHSEFRDNALFFFTYTEALISSGIAVLFSDIYSGETPETILTCKPLFFEKLSE ECCCCEEEECCCCCCEEEEEEHHHHHHHCCHHHHHHHHHCCCCCCEEEEECHHHHHHHHH HLSMGRSHGGESLFLNMQRIAVQYLTRKTL HHHHHHCCCCCCEEHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA