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Identifier: 15835156

GI number: 15835156

Start: 648951

End: 649253

Strand: Reverse

Name: Not Available

Synonym: TC0538

Alternate gene names: 15835156

Gene position: 649253-648951 (Counterclockwise)

Preceding gene: 15835157

Following gene: 15835155

Centisome position: 60.51

GC content: 39.6

Gene sequence:

>303_bases
ATGGCAACGATGACTAAGAAGAAACTAATCAGTACGATATCTCAAGATCATAAAATACATCCTAACCACGTGAGAACTGT
TATCCAAAATTTTTTGGATAAGATGACAGATGCTCTGGTTCAGGGGGATAGATTAGAGTTTAGAGATTTTGGCGTTCTGC
AGGTTGTAGAAAGAAAACCTAAAGTTGGGCGTAACCCTAAGAATGCAGCAGTGCCTATCCATATCCCTGCTAGAAGAGCC
GTGAAGTTCACTCCTGGCAAAAGAATGAAACGTTTGATTGAAACACCAACAAAATCTTCTTAG

Upstream 100 bases:

>100_bases
AAAAGTCTTGAATCCAAAGGATGAATGCATATTATACGCATATATTGCGGTATTTAGGGACGCAAGGGTTACCACTTTAA
CTAGGAGGCAACGAGCTACC

Downstream 100 bases:

>100_bases
TTCTCTTCCCTTTCCCCGCTCTGCTTTCGATCATAGGGTCAAGCTTGATGGTTACACAGGCTTGACTCTAATTTTCCCCA
AGATTATCTTTTGCTACTGA

Product: integration host factor beta subunit, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 100; Mature: 99

Protein sequence:

>100_residues
MATMTKKKLISTISQDHKIHPNHVRTVIQNFLDKMTDALVQGDRLEFRDFGVLQVVERKPKVGRNPKNAAVPIHIPARRA
VKFTPGKRMKRLIETPTKSS

Sequences:

>Translated_100_residues
MATMTKKKLISTISQDHKIHPNHVRTVIQNFLDKMTDALVQGDRLEFRDFGVLQVVERKPKVGRNPKNAAVPIHIPARRA
VKFTPGKRMKRLIETPTKSS
>Mature_99_residues
ATMTKKKLISTISQDHKIHPNHVRTVIQNFLDKMTDALVQGDRLEFRDFGVLQVVERKPKVGRNPKNAAVPIHIPARRAV
KFTPGKRMKRLIETPTKSS

Specific function: Histone-like DNA-binding protein which is capable of wrapping DNA to stabilize it, and thus to prevent its denaturation under extreme environmental conditions

COG id: COG0776

COG function: function code L; Bacterial nucleoid DNA-binding protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the bacterial histone-like protein family

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): DBH_CHLMU (P64387)

Other databases:

- EMBL:   AE002160
- PIR:   F81691
- RefSeq:   NP_296915.1
- ProteinModelPortal:   P64387
- SMR:   P64387
- GeneID:   1245898
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0538
- TIGR:   TC_0538
- HOGENOM:   HBG705085
- OMA:   FEVRERK
- ProtClustDB:   CLSK871293
- BioCyc:   CMUR243161:TC_0538-MONOMER
- InterPro:   IPR000119
- InterPro:   IPR010992
- Gene3D:   G3DSA:4.10.520.10
- SMART:   SM00411

Pfam domain/function: PF00216 Bac_DNA_binding; SSF47729 IHF_like_DNA_bnd

EC number: NA

Molecular weight: Translated: 11411; Mature: 11279

Theoretical pI: Translated: 11.72; Mature: 11.72

Prosite motif: PS00045 HISTONE_LIKE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
4.0 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MATMTKKKLISTISQDHKIHPNHVRTVIQNFLDKMTDALVQGDRLEFRDFGVLQVVERKP
CCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHCC
KVGRNPKNAAVPIHIPARRAVKFTPGKRMKRLIETPTKSS
CCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHCCCCCCC
>Mature Secondary Structure 
ATMTKKKLISTISQDHKIHPNHVRTVIQNFLDKMTDALVQGDRLEFRDFGVLQVVERKP
CCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHCHHHHHHHHCC
KVGRNPKNAAVPIHIPARRAVKFTPGKRMKRLIETPTKSS
CCCCCCCCCEEEEEECCCCEEEECCCHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 10684935