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Identifier: 15835140

GI number: 15835140

Start: 631511

End: 633874

Strand: Reverse

Name: Not Available

Synonym: TC0522

Alternate gene names: 15835140

Gene position: 633874-631511 (Counterclockwise)

Preceding gene: 15835141

Following gene: 15835139

Centisome position: 59.08

GC content: 39.72

Gene sequence:

>2364_bases
ATGAGAATGAATAAACGAACGTTATTATTTGTTTCCTTAGTGAGCGCAGCATTTTTGGGCTGCCAGATTTTCTTTGGGTA
TCAGGATTTGAAATCTTGTCAGGATCTGGCGGAAAAACAGCGTGCTATTTCTGAGCAAATATTAGCTTCAACAGAGCAGT
TGAGTGTAGTTCCTTGGACGGCTTCTGCAGAAGAAAGCGAATCGGTTAATCAATATGCTGTTCGTTTAGGGAATCGACTT
CTCGTTTTAACAAAAGGAGGAGCTCATTCTGAGGTACATTCTAAAGGAACCTCCTGGAAGCTAATAGATCAAACTAGTAC
CTTCGGGGGGATTCTGGTTTCTTTGTATGGAGAGGATGGGCAGGAGGTTTTATCAAAAGGCGGTTCCGTATATCTCCCTA
ATCAACAAGATGCACTCCCTGTTTTAGTGGCCGAGTTTCGCAGAAACCAAGAACCTCTTGTGTTTTTCGGAGAGTATAAA
AATGGCAAGCTTTCTAACAAAGCAGGGACTATCTATGGGACTTCGTTAGTTTTTCTTAATACAGGGAATGAATTTGTTCC
TTTAGGCATTTACAATTCTAAAGAAGAGTGTGTGGAATCTCTGGATCTTCCTATGGCAAGAGCTGTAGTTTTTGCCGATA
AAGAGAACCTGACAACGTCAGGCAGTTATTACATGCTCGCTAATGAATATATGCAAGTTATAGTCTCTCAGGAAAGTGGA
GCTATTGAGGGGATTAATCTTCCTTTTGCTTCTGATCGAGAAGGGAATAAGAGCATTGTCAATGAAATTGGATTTGATAG
AGAATTAGCAGCCGGCTCTCCATCTGAGGCTTCTTTCCCTGGAGTTCAAGCTATTGATTCTCAGCGTCAAAATGTATCGA
GTGTTGTAGGTGGATACTATCCTTTGCTTAGACGAGGGACTCTATCTGATACCAGAAAAATGGTTTCCCCTCAGTATCAA
GCCTTAAACATAGTCTCTGGGAGAGAGTTGTCTTCTCCTGTCGCAACGGGTTTTCGTGTAGTTTCGTTTGATAATAAAAC
GTTAGTTTTGGAAAGCGGGGATGGGGGCATTCGGAAAACGTATACCCTTGGAGAACAACCTTACGCTTTTGACCTTGAAA
TTCAAACTACTAGAGGACAAGAAGACTTATGGATAACTTCAGGAGTGCCTGAAGTTGAGATCATGTCTAATGCTTTTGTC
CCTGCAGTTAAGTATCATGCAGTGAAAAAAAATAAGAGTGACCTCATTAATGTGAAGTTACCCAAAGCAAAAGACTCTTT
GTTAGTACGTAATGACGCTTCCCCTCAATGGATTTTAAATTCCAATGGATACTTTGGAGTCATTCTTACTCCGAAGACCC
CTCTTCCTACGGGATATGCTTCTTCTTTCATTCCTGGGAATGCAGTTCCTACGCGACTTACTCAACTTTCCCCAAAAGAT
CAGGCTTACCCAGCTTCGAAATATCCTGGTTATACTGCAATGCTTCCTTTGCCTAAAGAAGCTGGCCGTTATCAGTTTAT
GGTGTATGCGGGTCCTTTATCAGAGCCTACTTTGAAGGCTTTAGATCGAGCTCACACGAATCATAAGGGAGAGTCTCCTG
AGTATGTTGATGCGATTGCATTTAGAGGTTTCTTTAGTTTTATAACAGAACCTTTTGCAGCTTTGTTATTTATTATAATG
AAATTTTTCCAATTTCTAACTGGATCTTGGGGAATTTCGATTATTTTATTAACGATTGTACTTAAGCTTGTGCTTTATCC
CTTGAATGCTTGGTCTATTCGATCTATGCGTCGTATGCAAAAGTTATCTCCATATATTCAAGATATTCAGCAGAAATACA
AGCGAGAGCCTAAGCGAGCACAAATGGAAATTATGGCCTTGTATAAGGTCAATAAAGTTAATCCAATAACAGGCTGTCTT
CCTCTAATTATTCAGATCCCATTTCTTATAGCAATGTTCGATCTTCTGAAATCTTCGTTTTTATTGAGAGGAGCGAGCTT
TATTCCTGGATGGATTGATAATTTAACTGCTCCAGATGTTCTTTTTTCTTGGGAAACCCCAATATGGTTCATTGGAAAGG
AATTCCATCTCCTTCCTATTTTGTTGGGTATTGTTATGTTCGCTCAACAAAAGATTTCTGCTATTAAAAGATCTGGGCCT
GTTTCGGATCAACAGCGTCAGCAAGAGGCTATGGGGACTATGATGGCGCTATTATTTACTTTCATGTTTTATAATTTCCC
TTCAGGGTTAAATATTTACTGGCTTTCTTCCATGTTACTCGGCGTTATTCAACAGTGGGCAACAAATAAAATTTTGGATG
AAAAACATTTACAGCATGAAGTGATTGTTAATAAGAAGAGATAG

Upstream 100 bases:

>100_bases
TGAGAGGTCTTCTTTGCACAAAGATTTTTTTTGATTAGGGAATTAAAGCAACCGTGATGGGAACGAGGCTTCCCTCTCCG
AAAGGAGAGATCCACCTCGG

Downstream 100 bases:

>100_bases
AGAACGCCAATAAAGGCAAATAGTTCTGTTTTTTAATTAGAATAGTTTTTATCAAAAACTATTTAGCTGAGATAGTTTTA
TGCGAGCTTGGGAAGAGTTC

Product: putative inner membrane protein translocase component YidC

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 787; Mature: 787

Protein sequence:

>787_residues
MRMNKRTLLFVSLVSAAFLGCQIFFGYQDLKSCQDLAEKQRAISEQILASTEQLSVVPWTASAEESESVNQYAVRLGNRL
LVLTKGGAHSEVHSKGTSWKLIDQTSTFGGILVSLYGEDGQEVLSKGGSVYLPNQQDALPVLVAEFRRNQEPLVFFGEYK
NGKLSNKAGTIYGTSLVFLNTGNEFVPLGIYNSKEECVESLDLPMARAVVFADKENLTTSGSYYMLANEYMQVIVSQESG
AIEGINLPFASDREGNKSIVNEIGFDRELAAGSPSEASFPGVQAIDSQRQNVSSVVGGYYPLLRRGTLSDTRKMVSPQYQ
ALNIVSGRELSSPVATGFRVVSFDNKTLVLESGDGGIRKTYTLGEQPYAFDLEIQTTRGQEDLWITSGVPEVEIMSNAFV
PAVKYHAVKKNKSDLINVKLPKAKDSLLVRNDASPQWILNSNGYFGVILTPKTPLPTGYASSFIPGNAVPTRLTQLSPKD
QAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLSEPTLKALDRAHTNHKGESPEYVDAIAFRGFFSFITEPFAALLFIIM
KFFQFLTGSWGISIILLTIVLKLVLYPLNAWSIRSMRRMQKLSPYIQDIQQKYKREPKRAQMEIMALYKVNKVNPITGCL
PLIIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETPIWFIGKEFHLLPILLGIVMFAQQKISAIKRSGP
VSDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWLSSMLLGVIQQWATNKILDEKHLQHEVIVNKKR

Sequences:

>Translated_787_residues
MRMNKRTLLFVSLVSAAFLGCQIFFGYQDLKSCQDLAEKQRAISEQILASTEQLSVVPWTASAEESESVNQYAVRLGNRL
LVLTKGGAHSEVHSKGTSWKLIDQTSTFGGILVSLYGEDGQEVLSKGGSVYLPNQQDALPVLVAEFRRNQEPLVFFGEYK
NGKLSNKAGTIYGTSLVFLNTGNEFVPLGIYNSKEECVESLDLPMARAVVFADKENLTTSGSYYMLANEYMQVIVSQESG
AIEGINLPFASDREGNKSIVNEIGFDRELAAGSPSEASFPGVQAIDSQRQNVSSVVGGYYPLLRRGTLSDTRKMVSPQYQ
ALNIVSGRELSSPVATGFRVVSFDNKTLVLESGDGGIRKTYTLGEQPYAFDLEIQTTRGQEDLWITSGVPEVEIMSNAFV
PAVKYHAVKKNKSDLINVKLPKAKDSLLVRNDASPQWILNSNGYFGVILTPKTPLPTGYASSFIPGNAVPTRLTQLSPKD
QAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLSEPTLKALDRAHTNHKGESPEYVDAIAFRGFFSFITEPFAALLFIIM
KFFQFLTGSWGISIILLTIVLKLVLYPLNAWSIRSMRRMQKLSPYIQDIQQKYKREPKRAQMEIMALYKVNKVNPITGCL
PLIIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETPIWFIGKEFHLLPILLGIVMFAQQKISAIKRSGP
VSDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWLSSMLLGVIQQWATNKILDEKHLQHEVIVNKKR
>Mature_787_residues
MRMNKRTLLFVSLVSAAFLGCQIFFGYQDLKSCQDLAEKQRAISEQILASTEQLSVVPWTASAEESESVNQYAVRLGNRL
LVLTKGGAHSEVHSKGTSWKLIDQTSTFGGILVSLYGEDGQEVLSKGGSVYLPNQQDALPVLVAEFRRNQEPLVFFGEYK
NGKLSNKAGTIYGTSLVFLNTGNEFVPLGIYNSKEECVESLDLPMARAVVFADKENLTTSGSYYMLANEYMQVIVSQESG
AIEGINLPFASDREGNKSIVNEIGFDRELAAGSPSEASFPGVQAIDSQRQNVSSVVGGYYPLLRRGTLSDTRKMVSPQYQ
ALNIVSGRELSSPVATGFRVVSFDNKTLVLESGDGGIRKTYTLGEQPYAFDLEIQTTRGQEDLWITSGVPEVEIMSNAFV
PAVKYHAVKKNKSDLINVKLPKAKDSLLVRNDASPQWILNSNGYFGVILTPKTPLPTGYASSFIPGNAVPTRLTQLSPKD
QAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLSEPTLKALDRAHTNHKGESPEYVDAIAFRGFFSFITEPFAALLFIIM
KFFQFLTGSWGISIILLTIVLKLVLYPLNAWSIRSMRRMQKLSPYIQDIQQKYKREPKRAQMEIMALYKVNKVNPITGCL
PLIIQIPFLIAMFDLLKSSFLLRGASFIPGWIDNLTAPDVLFSWETPIWFIGKEFHLLPILLGIVMFAQQKISAIKRSGP
VSDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWLSSMLLGVIQQWATNKILDEKHLQHEVIVNKKR

Specific function: Required for the insertion of integral membrane proteins into the membrane. Probably plays an essential role in the integration of proteins of the respiratory chain complexes. Involved in integration of membrane proteins that insert dependently and indepe

COG id: COG0706

COG function: function code U; Preprotein translocase subunit YidC

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein

Metaboloic importance: Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the OXA1/oxaA family. Type 1 subfamily

Homologues:

Organism=Escherichia coli, GI1790140, Length=441, Percent_Identity=27.891156462585, Blast_Score=152, Evalue=1e-37,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): OXAA_CHLMU (Q9PKE3)

Other databases:

- EMBL:   AE002160
- PIR:   G81692
- RefSeq:   NP_296899.1
- ProteinModelPortal:   Q9PKE3
- GeneID:   1245882
- GenomeReviews:   AE002160_GR
- KEGG:   cmu:TC0522
- TIGR:   TC_0522
- HOGENOM:   HBG414011
- OMA:   ALLFIIM
- ProtClustDB:   PRK01001
- BioCyc:   CMUR243161:TC_0522-MONOMER
- HAMAP:   MF_01810
- InterPro:   IPR019998
- InterPro:   IPR001708
- PANTHER:   PTHR12428
- PRINTS:   PR01900
- TIGRFAMs:   TIGR03592

Pfam domain/function: PF02096 60KD_IMP

EC number: NA

Molecular weight: Translated: 87737; Mature: 87737

Theoretical pI: Translated: 9.04; Mature: 9.04

Prosite motif: PS00013 PROKAR_LIPOPROTEIN

Important sites: NA

Signals:

None

Transmembrane regions:

HASH(0xce17b68)-; HASH(0xc828390)-; HASH(0xd02a368)-; HASH(0xc2b543c)-; HASH(0xc441d78)-;

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRMNKRTLLFVSLVSAAFLGCQIFFGYQDLKSCQDLAEKQRAISEQILASTEQLSVVPWT
CCCCCHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
ASAEESESVNQYAVRLGNRLLVLTKGGAHSEVHSKGTSWKLIDQTSTFGGILVSLYGEDG
CCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHCCCCCEEEEECCCCCCEEEEEEECCCH
QEVLSKGGSVYLPNQQDALPVLVAEFRRNQEPLVFFGEYKNGKLSNKAGTIYGTSLVFLN
HHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEE
TGNEFVPLGIYNSKEECVESLDLPMARAVVFADKENLTTSGSYYMLANEYMQVIVSQESG
CCCCEEEEEECCCHHHHHHHHCCCHHHEEEEECCCCCCCCCCEEEEHHHHHHHHHCCCCC
AIEGINLPFASDREGNKSIVNEIGFDRELAAGSPSEASFPGVQAIDSQRQNVSSVVGGYY
CEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
PLLRRGTLSDTRKMVSPQYQALNIVSGRELSSPVATGFRVVSFDNKTLVLESGDGGIRKT
HHHHCCCHHHHHHHHCCCHHEEEEECCCCCCCHHHCCEEEEEECCCEEEEECCCCCCEEE
YTLGEQPYAFDLEIQTTRGQEDLWITSGVPEVEIMSNAFVPAVKYHAVKKNKSDLINVKL
EEECCCCEEEEEEEEECCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHCCCCCEEEEEC
PKAKDSLLVRNDASPQWILNSNGYFGVILTPKTPLPTGYASSFIPGNAVPTRLTQLSPKD
CCCCCCEEEECCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
QAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLSEPTLKALDRAHTNHKGESPEYVDAIA
CCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHH
FRGFFSFITEPFAALLFIIMKFFQFLTGSWGISIILLTIVLKLVLYPLNAWSIRSMRRMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KLSPYIQDIQQKYKREPKRAQMEIMALYKVNKVNPITGCLPLIIQIPFLIAMFDLLKSSF
HHHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLRGASFIPGWIDNLTAPDVLFSWETPIWFIGKEFHLLPILLGIVMFAQQKISAIKRSGP
HHCCCCCCCHHHHCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
VSDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWLSSMLLGVIQQWATNKILDEKHLQHE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIVNKKR
HEEECCH
>Mature Secondary Structure
MRMNKRTLLFVSLVSAAFLGCQIFFGYQDLKSCQDLAEKQRAISEQILASTEQLSVVPWT
CCCCCHHHHHHHHHHHHHHHHHEEECHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEECC
ASAEESESVNQYAVRLGNRLLVLTKGGAHSEVHSKGTSWKLIDQTSTFGGILVSLYGEDG
CCCCCHHHHHHHHHHHCCEEEEEECCCCCCHHHCCCCCEEEEECCCCCCEEEEEEECCCH
QEVLSKGGSVYLPNQQDALPVLVAEFRRNQEPLVFFGEYKNGKLSNKAGTIYGTSLVFLN
HHHHHCCCCEEECCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCCCCCCEEEEEEEEEEE
TGNEFVPLGIYNSKEECVESLDLPMARAVVFADKENLTTSGSYYMLANEYMQVIVSQESG
CCCCEEEEEECCCHHHHHHHHCCCHHHEEEEECCCCCCCCCCEEEEHHHHHHHHHCCCCC
AIEGINLPFASDREGNKSIVNEIGFDRELAAGSPSEASFPGVQAIDSQRQNVSSVVGGYY
CEEECCCCCCCCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHH
PLLRRGTLSDTRKMVSPQYQALNIVSGRELSSPVATGFRVVSFDNKTLVLESGDGGIRKT
HHHHCCCHHHHHHHHCCCHHEEEEECCCCCCCHHHCCEEEEEECCCEEEEECCCCCCEEE
YTLGEQPYAFDLEIQTTRGQEDLWITSGVPEVEIMSNAFVPAVKYHAVKKNKSDLINVKL
EEECCCCEEEEEEEEECCCCCCEEEECCCCCEEECCCCCCCHHHHHHHHCCCCCEEEEEC
PKAKDSLLVRNDASPQWILNSNGYFGVILTPKTPLPTGYASSFIPGNAVPTRLTQLSPKD
CCCCCCEEEECCCCCCEEEECCCEEEEEECCCCCCCCCCCCCCCCCCCCCHHHHCCCCCC
QAYPASKYPGYTAMLPLPKEAGRYQFMVYAGPLSEPTLKALDRAHTNHKGESPEYVDAIA
CCCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCCCCCCHHHHHHH
FRGFFSFITEPFAALLFIIMKFFQFLTGSWGISIILLTIVLKLVLYPLNAWSIRSMRRMQ
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHH
KLSPYIQDIQQKYKREPKRAQMEIMALYKVNKVNPITGCLPLIIQIPFLIAMFDLLKSSF
HHHHHHHHHHHHHHCCCHHHHHHHHEEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
LLRGASFIPGWIDNLTAPDVLFSWETPIWFIGKEFHLLPILLGIVMFAQQKISAIKRSGP
HHCCCCCCCHHHHCCCCCCEEEECCCCEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCC
VSDQQRQQEAMGTMMALLFTFMFYNFPSGLNIYWLSSMLLGVIQQWATNKILDEKHLQHE
CCHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VIVNKKR
HEEECCH

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 10684935