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Identifier: 15835120

GI number: 15835120

Start: 607956

End: 609428

Strand: Direct

Name: Not Available

Synonym: TC0502

Alternate gene names: NA

Gene position: 607956-609428 (Clockwise)

Preceding gene: 15835119

Following gene: 15835121

Centisome position: 56.66

GC content: 39.1

Gene sequence:

>1473_bases
ATGAATAAAAAAAATACTGTGTTCTCATCAAGACTTGGATTCATTTTATCTATGATGGGAGTTGCTATTGGAGCCGGAAA
CATTTGGCGATTCCCAAGAATGGTAGCCCAAAATGGTGGAGGATCTTTCATTATTTTGTGGTTATTATTTCTTTTGATCT
GGTCCATTCCTTTAATTATCGTTGAGCTTTCTTTGGGGAAACTTACTAAGAAAGCTCCTGTAGGAACTCTGATTCGGACT
GCAGGCCCTAAAGCTGCCTGGCTTGGAGGATTTGTTGTCCTAGTAGCAACATGCATACTTGGTTACTACTCTAATATTGT
AGGCTGGGGGTTTAGCTACTCTTTCTATGCTTTATCTGGGAAAATTTCCCCCGGGAATAATTTCCCCCAACTTTGGGCAA
ATCATTGTCAAAGCTGGATGCCTCTGAGTTGCCACTGCCTAGCTTTATTTCTATCCTATTGCGTAATTCGGAAAGGAATC
GTTAATGGAATAGAATCTTGTAACAAAATCCTAATCCCGCTCTTTTGTATTTGTTCTCTTGTTTTATTAGCGAGAGCCGT
TTCTCTTCCCAATGCGTGGGAAGGCATTCGCCTACTATTTGTTTTTAACAAAGAGTCCTTATCGAATTACAAAGTATGGA
TAGAAGCTTTAACTCAAAATGCTTGGGACACTGGAGCTGGATGGGGGCTTCTCCTTGTGTATGCAGGATTTACTTCAAAG
CGAACAAGTCTGGTCACGAATGGAACGATTACCGCTGTCACCAATAACCTTATTTCCTTTCTTATGGCTGTGATTGTTTT
TTCTGCTTGCGCATCTTTGGATTCCACAGAAATGTTAGGATTAAAAGAAGGCGTTGGTGCATCTAACATAGGCATGGCCT
TTATTTATCTTCCCGAACTATTTACTCGATTACCTCAAGCTCATCTCCTTTCGACTGTTTTTAGTGCAATCTTCTTCCTA
GCCTTTTCTATGGCTGCACTATCTTCTATGATCTCAATGCTATTTCTGTTATCCCAAACATTAACAGAATTTGGAATCAA
AAAACATATTGCAGAGTCTTCAGCAACGATTATTGCTTTCCTAATCGGGGTTCCCTCTGCACTGAGTCTGAAATTCTTTG
ATAACCAAGATACTGTATGGGGAATTGCTCTTATTCTCAATGGTATGATTTTCATTTATGCCGCAATTAGTTATGGGATC
CCTTCGTTGAGAAAAGAGGTTATCAACTCAGTGCCTGGCGATTACAAATTAAAGGCTTATTTTGATGTTTTAGTAAAATT
TTTACTGCCTTTAGAAGGAGCATTGCTACTCGCTTGGTATTTTTATGAAGGAGCTCTACTTCCTCAAGGATGCTGGTGGA
ATCCATTTGCTTCTTATAATATTTTGAGTTTACTCATGCAGTGGGGACTAGGAGCAGGAGCATTATTTCTTCTTAATCGC
CGATTATATACAAGATTTTATTTGAACAACTAA

Upstream 100 bases:

>100_bases
TTGCATCTCAATCATCGGGTCTTTTCGTTTGATAGTGATTAGCCTTGCAAGGTACGCAAGGCTGGCTCTTTTTTATGATT
ACCCCAAAATAGAATGATTT

Downstream 100 bases:

>100_bases
CCCCTAACTAGGTTGCTTGTAAGTCTTTTGCATGGTATACTCATCGGTCAGTTGGGGTTTTCTCATTCATTGAAAGCCCC
TTGTTGTGATTCTTACAGAG

Product: sodium-dependent transporter, putative

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 490; Mature: 490

Protein sequence:

>490_residues
MNKKNTVFSSRLGFILSMMGVAIGAGNIWRFPRMVAQNGGGSFIILWLLFLLIWSIPLIIVELSLGKLTKKAPVGTLIRT
AGPKAAWLGGFVVLVATCILGYYSNIVGWGFSYSFYALSGKISPGNNFPQLWANHCQSWMPLSCHCLALFLSYCVIRKGI
VNGIESCNKILIPLFCICSLVLLARAVSLPNAWEGIRLLFVFNKESLSNYKVWIEALTQNAWDTGAGWGLLLVYAGFTSK
RTSLVTNGTITAVTNNLISFLMAVIVFSACASLDSTEMLGLKEGVGASNIGMAFIYLPELFTRLPQAHLLSTVFSAIFFL
AFSMAALSSMISMLFLLSQTLTEFGIKKHIAESSATIIAFLIGVPSALSLKFFDNQDTVWGIALILNGMIFIYAAISYGI
PSLRKEVINSVPGDYKLKAYFDVLVKFLLPLEGALLLAWYFYEGALLPQGCWWNPFASYNILSLLMQWGLGAGALFLLNR
RLYTRFYLNN

Sequences:

>Translated_490_residues
MNKKNTVFSSRLGFILSMMGVAIGAGNIWRFPRMVAQNGGGSFIILWLLFLLIWSIPLIIVELSLGKLTKKAPVGTLIRT
AGPKAAWLGGFVVLVATCILGYYSNIVGWGFSYSFYALSGKISPGNNFPQLWANHCQSWMPLSCHCLALFLSYCVIRKGI
VNGIESCNKILIPLFCICSLVLLARAVSLPNAWEGIRLLFVFNKESLSNYKVWIEALTQNAWDTGAGWGLLLVYAGFTSK
RTSLVTNGTITAVTNNLISFLMAVIVFSACASLDSTEMLGLKEGVGASNIGMAFIYLPELFTRLPQAHLLSTVFSAIFFL
AFSMAALSSMISMLFLLSQTLTEFGIKKHIAESSATIIAFLIGVPSALSLKFFDNQDTVWGIALILNGMIFIYAAISYGI
PSLRKEVINSVPGDYKLKAYFDVLVKFLLPLEGALLLAWYFYEGALLPQGCWWNPFASYNILSLLMQWGLGAGALFLLNR
RLYTRFYLNN
>Mature_490_residues
MNKKNTVFSSRLGFILSMMGVAIGAGNIWRFPRMVAQNGGGSFIILWLLFLLIWSIPLIIVELSLGKLTKKAPVGTLIRT
AGPKAAWLGGFVVLVATCILGYYSNIVGWGFSYSFYALSGKISPGNNFPQLWANHCQSWMPLSCHCLALFLSYCVIRKGI
VNGIESCNKILIPLFCICSLVLLARAVSLPNAWEGIRLLFVFNKESLSNYKVWIEALTQNAWDTGAGWGLLLVYAGFTSK
RTSLVTNGTITAVTNNLISFLMAVIVFSACASLDSTEMLGLKEGVGASNIGMAFIYLPELFTRLPQAHLLSTVFSAIFFL
AFSMAALSSMISMLFLLSQTLTEFGIKKHIAESSATIIAFLIGVPSALSLKFFDNQDTVWGIALILNGMIFIYAAISYGI
PSLRKEVINSVPGDYKLKAYFDVLVKFLLPLEGALLLAWYFYEGALLPQGCWWNPFASYNILSLLMQWGLGAGALFLLNR
RLYTRFYLNN

Specific function: Putative sodium-dependent transporter [H]

COG id: COG0733

COG function: function code R; Na+-dependent transporters of the SNF family

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the sodium:neurotransmitter symporter (SNF) (TC 2.A.22) family [H]

Homologues:

Organism=Homo sapiens, GI134304856, Length=344, Percent_Identity=26.7441860465116, Blast_Score=119, Evalue=7e-27,
Organism=Homo sapiens, GI4507041, Length=402, Percent_Identity=23.6318407960199, Blast_Score=114, Evalue=3e-25,
Organism=Homo sapiens, GI289191351, Length=400, Percent_Identity=24.5, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI4557046, Length=400, Percent_Identity=24.5, Blast_Score=111, Evalue=1e-24,
Organism=Homo sapiens, GI289191377, Length=400, Percent_Identity=24.5, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI4507043, Length=384, Percent_Identity=24.7395833333333, Blast_Score=111, Evalue=2e-24,
Organism=Homo sapiens, GI11181770, Length=303, Percent_Identity=26.7326732673267, Blast_Score=106, Evalue=6e-23,
Organism=Homo sapiens, GI188528618, Length=418, Percent_Identity=24.1626794258373, Blast_Score=105, Evalue=1e-22,
Organism=Homo sapiens, GI33354281, Length=365, Percent_Identity=23.8356164383562, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI194018524, Length=303, Percent_Identity=26.0726072607261, Blast_Score=100, Evalue=5e-21,
Organism=Homo sapiens, GI21361581, Length=401, Percent_Identity=22.4438902743142, Blast_Score=96, Evalue=5e-20,
Organism=Homo sapiens, GI58219014, Length=299, Percent_Identity=24.0802675585284, Blast_Score=94, Evalue=3e-19,
Organism=Homo sapiens, GI171184408, Length=374, Percent_Identity=25.1336898395722, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI171184406, Length=374, Percent_Identity=25.1336898395722, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI171184404, Length=374, Percent_Identity=25.1336898395722, Blast_Score=93, Evalue=7e-19,
Organism=Homo sapiens, GI67782317, Length=432, Percent_Identity=23.1481481481481, Blast_Score=92, Evalue=1e-18,
Organism=Homo sapiens, GI7657587, Length=406, Percent_Identity=22.6600985221675, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI67782313, Length=432, Percent_Identity=23.1481481481481, Blast_Score=91, Evalue=2e-18,
Organism=Homo sapiens, GI67782315, Length=432, Percent_Identity=23.1481481481481, Blast_Score=91, Evalue=3e-18,
Organism=Homo sapiens, GI51468073, Length=294, Percent_Identity=24.4897959183673, Blast_Score=89, Evalue=1e-17,
Organism=Homo sapiens, GI12408638, Length=298, Percent_Identity=24.8322147651007, Blast_Score=87, Evalue=3e-17,
Organism=Homo sapiens, GI92859670, Length=158, Percent_Identity=32.9113924050633, Blast_Score=80, Evalue=3e-15,
Organism=Homo sapiens, GI197276623, Length=417, Percent_Identity=21.8225419664269, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI54607094, Length=417, Percent_Identity=21.8225419664269, Blast_Score=80, Evalue=5e-15,
Organism=Homo sapiens, GI21361693, Length=118, Percent_Identity=33.0508474576271, Blast_Score=77, Evalue=4e-14,
Organism=Homo sapiens, GI6005715, Length=164, Percent_Identity=29.8780487804878, Blast_Score=74, Evalue=3e-13,
Organism=Homo sapiens, GI218563756, Length=111, Percent_Identity=32.4324324324324, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI197276625, Length=145, Percent_Identity=28.2758620689655, Blast_Score=67, Evalue=4e-11,
Organism=Homo sapiens, GI5032097, Length=109, Percent_Identity=33.0275229357798, Blast_Score=67, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17555248, Length=477, Percent_Identity=25.7861635220126, Blast_Score=109, Evalue=3e-24,
Organism=Caenorhabditis elegans, GI25146584, Length=410, Percent_Identity=23.4146341463415, Blast_Score=100, Evalue=3e-21,
Organism=Caenorhabditis elegans, GI17569475, Length=449, Percent_Identity=23.3853006681514, Blast_Score=91, Evalue=1e-18,
Organism=Caenorhabditis elegans, GI71995588, Length=352, Percent_Identity=24.1477272727273, Blast_Score=84, Evalue=2e-16,
Organism=Caenorhabditis elegans, GI17554804, Length=325, Percent_Identity=25.5384615384615, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI17542050, Length=126, Percent_Identity=31.7460317460317, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI212642127, Length=95, Percent_Identity=36.8421052631579, Blast_Score=67, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17535731, Length=108, Percent_Identity=33.3333333333333, Blast_Score=65, Evalue=8e-11,
Organism=Caenorhabditis elegans, GI133952791, Length=136, Percent_Identity=31.6176470588235, Blast_Score=65, Evalue=1e-10,
Organism=Drosophila melanogaster, GI17136952, Length=421, Percent_Identity=24.2280285035629, Blast_Score=119, Evalue=4e-27,
Organism=Drosophila melanogaster, GI24762620, Length=367, Percent_Identity=26.7029972752044, Blast_Score=117, Evalue=1e-26,
Organism=Drosophila melanogaster, GI281364394, Length=418, Percent_Identity=24.4019138755981, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI28574704, Length=418, Percent_Identity=24.4019138755981, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI17136950, Length=418, Percent_Identity=24.4019138755981, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI28574702, Length=418, Percent_Identity=24.4019138755981, Blast_Score=115, Evalue=5e-26,
Organism=Drosophila melanogaster, GI24582567, Length=354, Percent_Identity=25.9887005649718, Blast_Score=115, Evalue=7e-26,
Organism=Drosophila melanogaster, GI45550877, Length=422, Percent_Identity=24.1706161137441, Blast_Score=108, Evalue=6e-24,
Organism=Drosophila melanogaster, GI45551183, Length=430, Percent_Identity=24.4186046511628, Blast_Score=108, Evalue=7e-24,
Organism=Drosophila melanogaster, GI281364136, Length=399, Percent_Identity=26.0651629072682, Blast_Score=107, Evalue=2e-23,
Organism=Drosophila melanogaster, GI221329674, Length=366, Percent_Identity=25.1366120218579, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24639514, Length=366, Percent_Identity=25.1366120218579, Blast_Score=106, Evalue=3e-23,
Organism=Drosophila melanogaster, GI24639516, Length=378, Percent_Identity=24.0740740740741, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24661428, Length=406, Percent_Identity=22.9064039408867, Blast_Score=100, Evalue=2e-21,
Organism=Drosophila melanogaster, GI24655079, Length=485, Percent_Identity=23.9175257731959, Blast_Score=100, Evalue=3e-21,
Organism=Drosophila melanogaster, GI281363702, Length=388, Percent_Identity=25.5154639175258, Blast_Score=97, Evalue=3e-20,
Organism=Drosophila melanogaster, GI19921936, Length=465, Percent_Identity=23.2258064516129, Blast_Score=94, Evalue=3e-19,
Organism=Drosophila melanogaster, GI281363700, Length=349, Percent_Identity=27.2206303724928, Blast_Score=92, Evalue=1e-18,
Organism=Drosophila melanogaster, GI45551088, Length=405, Percent_Identity=24.9382716049383, Blast_Score=90, Evalue=3e-18,
Organism=Drosophila melanogaster, GI24652942, Length=405, Percent_Identity=24.9382716049383, Blast_Score=90, Evalue=4e-18,
Organism=Drosophila melanogaster, GI24582569, Length=315, Percent_Identity=24.4444444444444, Blast_Score=78, Evalue=2e-14,
Organism=Drosophila melanogaster, GI24654186, Length=145, Percent_Identity=28.9655172413793, Blast_Score=72, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000175 [H]

Pfam domain/function: PF00209 SNF [H]

EC number: NA

Molecular weight: Translated: 53987; Mature: 53987

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS50267 NA_NEUROTRAN_SYMP_3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNKKNTVFSSRLGFILSMMGVAIGAGNIWRFPRMVAQNGGGSFIILWLLFLLIWSIPLII
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VELSLGKLTKKAPVGTLIRTAGPKAAWLGGFVVLVATCILGYYSNIVGWGFSYSFYALSG
HHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
KISPGNNFPQLWANHCQSWMPLSCHCLALFLSYCVIRKGIVNGIESCNKILIPLFCICSL
ECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLARAVSLPNAWEGIRLLFVFNKESLSNYKVWIEALTQNAWDTGAGWGLLLVYAGFTSK
HHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHEECCCCC
RTSLVTNGTITAVTNNLISFLMAVIVFSACASLDSTEMLGLKEGVGASNIGMAFIYLPEL
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHCCCCCCCCCHHHHHHHHH
FTRLPQAHLLSTVFSAIFFLAFSMAALSSMISMLFLLSQTLTEFGIKKHIAESSATIIAF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
LIGVPSALSLKFFDNQDTVWGIALILNGMIFIYAAISYGIPSLRKEVINSVPGDYKLKAY
HHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHH
FDVLVKFLLPLEGALLLAWYFYEGALLPQGCWWNPFASYNILSLLMQWGLGAGALFLLNR
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
RLYTRFYLNN
HHHHHEEECC
>Mature Secondary Structure
MNKKNTVFSSRLGFILSMMGVAIGAGNIWRFPRMVAQNGGGSFIILWLLFLLIWSIPLII
CCCCCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHH
VELSLGKLTKKAPVGTLIRTAGPKAAWLGGFVVLVATCILGYYSNIVGWGFSYSFYALSG
HHHHHHHHHHCCCCHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEEEE
KISPGNNFPQLWANHCQSWMPLSCHCLALFLSYCVIRKGIVNGIESCNKILIPLFCICSL
ECCCCCCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
VLLARAVSLPNAWEGIRLLFVFNKESLSNYKVWIEALTQNAWDTGAGWGLLLVYAGFTSK
HHHHHHHCCCCCCCCEEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCHHHHHHEECCCCC
RTSLVTNGTITAVTNNLISFLMAVIVFSACASLDSTEMLGLKEGVGASNIGMAFIYLPEL
CCEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCHHCCCCCCCCCHHHHHHHHH
FTRLPQAHLLSTVFSAIFFLAFSMAALSSMISMLFLLSQTLTEFGIKKHIAESSATIIAF
HHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHH
LIGVPSALSLKFFDNQDTVWGIALILNGMIFIYAAISYGIPSLRKEVINSVPGDYKLKAY
HHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHCCCCCCHHHH
FDVLVKFLLPLEGALLLAWYFYEGALLPQGCWWNPFASYNILSLLMQWGLGAGALFLLNR
HHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHH
RLYTRFYLNN
HHHHHEEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 8688087 [H]