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The map label for this gene is rcp1 [H]

Identifier: 158338977

GI number: 158338977

Start: 5957217

End: 5957645

Strand: Reverse

Name: rcp1 [H]

Synonym: AM1_5896

Alternate gene names: 158338977

Gene position: 5957645-5957217 (Counterclockwise)

Preceding gene: 158338978

Following gene: 158338974

Centisome position: 91.6

GC content: 42.66

Gene sequence:

>429_bases
ATGATTGAAATCTTGCTGGTGGAGGATGATGAGGGGGATATAGAACTCACCTTGGAAGCCTTTAATCGTTCAAAAGTTGC
CCTCAGAGTTAATGTGGTTAGAGATGGTATAGAAGCTTTGGACTATCTACAAAAAAAAGGGGAATTTGAGACAGCAAGGA
CTCCCGATTTGATGTTGCTTGATCTCAACTTACCGCGCAAGGATGGCCGAGAAGTATTGACTGATATGCAAGAGAGTGAT
CGGTTTAAGCAAATACCAGTGGTCGTACTGACAACATCAGACGCAGATGAAGATATTCTGAAGAGTTATAAGATCGGGGC
AAATGCGTATGTCACCAAACCAGTGGGACTGAAGGGATTGGTTAAGGTGGTCAATTTACTGGAGGACTTTTGGTTTACGA
TTGTAAAGTTGCCTCCCCATGATATGTAA

Upstream 100 bases:

>100_bases
TAATTAAATTTATCTGGCCAATAAATTATAATTCATGCGATTTTTATAAATTTGTTTATGATATTGAATAGCTAGCCGAG
TTTAAACTTTGGTGCAATAG

Downstream 100 bases:

>100_bases
CGAGATCACAGACTGACTTGAGCCGATCTACTGCTCTTTGACCTGGGCACTTGTCACTCGTTCGACTGCAGCAATTAACT
CCTCCAAATCGATCGGTTTC

Product: response regulator

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 142; Mature: 142

Protein sequence:

>142_residues
MIEILLVEDDEGDIELTLEAFNRSKVALRVNVVRDGIEALDYLQKKGEFETARTPDLMLLDLNLPRKDGREVLTDMQESD
RFKQIPVVVLTTSDADEDILKSYKIGANAYVTKPVGLKGLVKVVNLLEDFWFTIVKLPPHDM

Sequences:

>Translated_142_residues
MIEILLVEDDEGDIELTLEAFNRSKVALRVNVVRDGIEALDYLQKKGEFETARTPDLMLLDLNLPRKDGREVLTDMQESD
RFKQIPVVVLTTSDADEDILKSYKIGANAYVTKPVGLKGLVKVVNLLEDFWFTIVKLPPHDM
>Mature_142_residues
MIEILLVEDDEGDIELTLEAFNRSKVALRVNVVRDGIEALDYLQKKGEFETARTPDLMLLDLNLPRKDGREVLTDMQESD
RFKQIPVVVLTTSDADEDILKSYKIGANAYVTKPVGLKGLVKVVNLLEDFWFTIVKLPPHDM

Specific function: Forms a two-component system with cph1 in which it acts as receiver substrate [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 response regulatory domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011006
- InterPro:   IPR001789 [H]

Pfam domain/function: PF00072 Response_reg [H]

EC number: NA

Molecular weight: Translated: 16118; Mature: 16118

Theoretical pI: Translated: 4.38; Mature: 4.38

Prosite motif: PS50110 RESPONSE_REGULATORY

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIEILLVEDDEGDIELTLEAFNRSKVALRVNVVRDGIEALDYLQKKGEFETARTPDLMLL
CEEEEEEECCCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
DLNLPRKDGREVLTDMQESDRFKQIPVVVLTTSDADEDILKSYKIGANAYVTKPVGLKGL
EECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCCHHHH
VKVVNLLEDFWFTIVKLPPHDM
HHHHHHHHHHHEEEEECCCCCC
>Mature Secondary Structure
MIEILLVEDDEGDIELTLEAFNRSKVALRVNVVRDGIEALDYLQKKGEFETARTPDLMLL
CEEEEEEECCCCCEEEEEEECCCCEEEEEEEHHHHHHHHHHHHHHCCCCCCCCCCCEEEE
DLNLPRKDGREVLTDMQESDRFKQIPVVVLTTSDADEDILKSYKIGANAYVTKPVGLKGL
EECCCCCCCHHHHHHHHHCCCCCCCCEEEEEECCCCHHHHHHHCCCCCEEEECCCCHHHH
VKVVNLLEDFWFTIVKLPPHDM
HHHHHHHHHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231; 9278513 [H]