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The map label for this gene is ycjY [H]

Identifier: 158338926

GI number: 158338926

Start: 5913223

End: 5914182

Strand: Reverse

Name: ycjY [H]

Synonym: AM1_5843

Alternate gene names: 158338926

Gene position: 5914182-5913223 (Counterclockwise)

Preceding gene: 158338927

Following gene: 158338925

Centisome position: 90.94

GC content: 51.46

Gene sequence:

>960_bases
ATGAAACGAATCTTTGAATCAGCGATCGCAACCGTCCTTGCCCTTGGCACTATCCAATCCGCTGAGGCTGCTCAAGTGAA
GCGTGTCACTTTTGATAGCCAAGGCCAAGCCCTGGTCGGTCACCTCTACCTACCGGATAATTACCAAGAAGGGCAGCAGT
TACCCGGTGTGGTAGTCACTGGCTCTTGGACATCCGTTAAAGAACAAATGGCGGGTACCTATGCCAGCGAATTAGCAGAC
CGAGGCTATGCATCCCTTGCCTTTGATTTTCGAGGGTGGGGGGAATCCCAGGATACTGTGAAGTTCCTCGAAGATCCCAA
GCGCAAAACTGAGGACATCATTGCTGCAGCCGAGTTTCTGACCACTCGCCCTGAAGTCAATCCAGATAAAGTTGGGGGAC
TGGGGATTTGTGCCAGCGCTGGTTATATTGCCGATGCAGCACTCACTAGTGATGCGATCCATTCTGTGGCTCTAGTAGCA
CCCTGGCTCCATAATGCTGAGATTGTTAAAACCGTGTATGGGGGTTCCGATGGTGTCACTGCTCTGCTGGAGACCGGTCG
CAAAGCTAAAGCGAAGTTTCAATCAACGGGTGAGATGTCTATCGTACCCGCGGCCAGCGACACCGATAAAACCGCCATCA
TGCAAGAGGCTCCCTACTACACTGATCCAGAGCGGGGTTCTATTCCTGAATATGACAACCAGTTCAACTTAGCAACTTGG
GAGCCGTGGTTAACCTACGATGCCCTACAAACGGCGACACAACTTAAGAAACCCACATTGTTGGTGCATTCCGAATCGGC
TGCAATTCCGCAGGGGGCACAGGAATTTGCTCAACGGATGGGAGATATGGCCACCACAGTATGGCTAGAGAATGTCACTC
AGTTTGATTTCTATGACAACCCCACTGATGTTGCCCACGCAACGAAAGAGGTTGACCGTCACTTCCAAGCAACGCTGTAG

Upstream 100 bases:

>100_bases
AATCTTCAAAAAATCGCCCAAGATACTTCAAGCTCTTCAGGGATGGCTGCTTATACATTGGCAAGTGTCAGACCAACACA
AGCCACACAGGAGCCTTGCC

Downstream 100 bases:

>100_bases
GAGTTCACGATGAAGCAAATTTGGAAAGGAGTATTGGCCATGACTATCCTTGCATCAACTTCTACACATGCGTTTGCAAC
TCCTCAAGATAACGCTCAAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 319; Mature: 319

Protein sequence:

>319_residues
MKRIFESAIATVLALGTIQSAEAAQVKRVTFDSQGQALVGHLYLPDNYQEGQQLPGVVVTGSWTSVKEQMAGTYASELAD
RGYASLAFDFRGWGESQDTVKFLEDPKRKTEDIIAAAEFLTTRPEVNPDKVGGLGICASAGYIADAALTSDAIHSVALVA
PWLHNAEIVKTVYGGSDGVTALLETGRKAKAKFQSTGEMSIVPAASDTDKTAIMQEAPYYTDPERGSIPEYDNQFNLATW
EPWLTYDALQTATQLKKPTLLVHSESAAIPQGAQEFAQRMGDMATTVWLENVTQFDFYDNPTDVAHATKEVDRHFQATL

Sequences:

>Translated_319_residues
MKRIFESAIATVLALGTIQSAEAAQVKRVTFDSQGQALVGHLYLPDNYQEGQQLPGVVVTGSWTSVKEQMAGTYASELAD
RGYASLAFDFRGWGESQDTVKFLEDPKRKTEDIIAAAEFLTTRPEVNPDKVGGLGICASAGYIADAALTSDAIHSVALVA
PWLHNAEIVKTVYGGSDGVTALLETGRKAKAKFQSTGEMSIVPAASDTDKTAIMQEAPYYTDPERGSIPEYDNQFNLATW
EPWLTYDALQTATQLKKPTLLVHSESAAIPQGAQEFAQRMGDMATTVWLENVTQFDFYDNPTDVAHATKEVDRHFQATL
>Mature_319_residues
MKRIFESAIATVLALGTIQSAEAAQVKRVTFDSQGQALVGHLYLPDNYQEGQQLPGVVVTGSWTSVKEQMAGTYASELAD
RGYASLAFDFRGWGESQDTVKFLEDPKRKTEDIIAAAEFLTTRPEVNPDKVGGLGICASAGYIADAALTSDAIHSVALVA
PWLHNAEIVKTVYGGSDGVTALLETGRKAKAKFQSTGEMSIVPAASDTDKTAIMQEAPYYTDPERGSIPEYDNQFNLATW
EPWLTYDALQTATQLKKPTLLVHSESAAIPQGAQEFAQRMGDMATTVWLENVTQFDFYDNPTDVAHATKEVDRHFQATL

Specific function: Unknown

COG id: COG1073

COG function: function code R; Hydrolases of the alpha/beta superfamily

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI221142683, Length=311, Percent_Identity=30.2250803858521, Blast_Score=119, Evalue=3e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002925 [H]

Pfam domain/function: PF01738 DLH [H]

EC number: NA

Molecular weight: Translated: 34723; Mature: 34723

Theoretical pI: Translated: 4.46; Mature: 4.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
1.9 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKRIFESAIATVLALGTIQSAEAAQVKRVTFDSQGQALVGHLYLPDNYQEGQQLPGVVVT
CHHHHHHHHHHHHHHHCCCCCHHHHHEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEE
GSWTSVKEQMAGTYASELADRGYASLAFDFRGWGESQDTVKFLEDPKRKTEDIIAAAEFL
CCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHH
TTRPEVNPDKVGGLGICASAGYIADAALTSDAIHSVALVAPWLHNAEIVKTVYGGSDGVT
HCCCCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHEECCCCCCHH
ALLETGRKAKAKFQSTGEMSIVPAASDTDKTAIMQEAPYYTDPERGSIPEYDNQFNLATW
HHHHCCCHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC
EPWLTYDALQTATQLKKPTLLVHSESAAIPQGAQEFAQRMGDMATTVWLENVTQFDFYDN
CCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCC
PTDVAHATKEVDRHFQATL
CHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MKRIFESAIATVLALGTIQSAEAAQVKRVTFDSQGQALVGHLYLPDNYQEGQQLPGVVVT
CHHHHHHHHHHHHHHHCCCCCHHHHHEEEEECCCCCEEEEEEECCCCCCCCCCCCCEEEE
GSWTSVKEQMAGTYASELADRGYASLAFDFRGWGESQDTVKFLEDPKRKTEDIIAAAEFL
CCHHHHHHHHHHHHHHHHHHCCCEEEEEEECCCCCCHHHHHHHHCHHHHHHHHHHHHHHH
TTRPEVNPDKVGGLGICASAGYIADAALTSDAIHSVALVAPWLHNAEIVKTVYGGSDGVT
HCCCCCCHHHCCCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHCCCCEEHEECCCCCCHH
ALLETGRKAKAKFQSTGEMSIVPAASDTDKTAIMQEAPYYTDPERGSIPEYDNQFNLATW
HHHHCCCHHHHHHCCCCCEEEEECCCCCCHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEC
EPWLTYDALQTATQLKKPTLLVHSESAAIPQGAQEFAQRMGDMATTVWLENVTQFDFYDN
CCHHHHHHHHHHHHHCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHCCEEECCCCC
PTDVAHATKEVDRHFQATL
CHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9097039; 9278503 [H]