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The map label for this gene is wcaB [H]

Identifier: 158338811

GI number: 158338811

Start: 5801838

End: 5802386

Strand: Reverse

Name: wcaB [H]

Synonym: AM1_5722

Alternate gene names: 158338811

Gene position: 5802386-5801838 (Counterclockwise)

Preceding gene: 158338812

Following gene: 158338810

Centisome position: 89.22

GC content: 39.71

Gene sequence:

>549_bases
ATGATAAAAAACCAGCTGCTCGAATATATTTTTCAAGACTGGGAGGTTAATAAGCTGACCAGTTTAAAGTCGCGACTTGT
GCTTTCTTTTTTTAGGACTTCTCAATTACTATCAAACCTTCCCTATCCACTTAGATTACTAACTTATCTATATCAGATTT
TTACGGAGATACTATTTGCAATAGAATTGCCTACTGACACTACAATAGGCAAGAATCTTCAACTTCAGCATGGATTTTCA
CTAGTTATCAATCGCCATGCAACTATCGGTAGGGATTGTATCATTCGTCACTCCACTACGATTGGAAATAAGATTCTATC
GGATGGGTCAGTTTCTTCATCTCCCACCATTGGAGACCATGTTGAAATTGGTTGTAATGTTGTTATTCTTGGCCCCATCG
AAATTGGAGATAATGCTGTTATTGGAGCTGGAGCTGTAGTGGTATCCAATGTTCCTGCCCATGCTGTAGTCGCTGGTAAC
CCTGCCAAAGTTATTCGCTTAAATCATTTTCACTCCGGCTTGTCCTACGTTAGTAGACCTCTCGCATAA

Upstream 100 bases:

>100_bases
TTGATCAAGCATTCGATAAACAAATGACTGCTGGTCAGGCTAGGCCTGCACTTAGAGTTGCTAATCAACGAGTTTGATCC
GGGTTATTCAGGTGAGATTG

Downstream 100 bases:

>100_bases
TTCAGCTAACGGCATGGTAGCGAACTAAAAATTCAAGTCAGATCGCGGCATAAATTGAGTGCGTAACACACCATGAAACG
AATATTGCAAGAGGTCTAGT

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 182; Mature: 182

Protein sequence:

>182_residues
MIKNQLLEYIFQDWEVNKLTSLKSRLVLSFFRTSQLLSNLPYPLRLLTYLYQIFTEILFAIELPTDTTIGKNLQLQHGFS
LVINRHATIGRDCIIRHSTTIGNKILSDGSVSSSPTIGDHVEIGCNVVILGPIEIGDNAVIGAGAVVVSNVPAHAVVAGN
PAKVIRLNHFHSGLSYVSRPLA

Sequences:

>Translated_182_residues
MIKNQLLEYIFQDWEVNKLTSLKSRLVLSFFRTSQLLSNLPYPLRLLTYLYQIFTEILFAIELPTDTTIGKNLQLQHGFS
LVINRHATIGRDCIIRHSTTIGNKILSDGSVSSSPTIGDHVEIGCNVVILGPIEIGDNAVIGAGAVVVSNVPAHAVVAGN
PAKVIRLNHFHSGLSYVSRPLA
>Mature_182_residues
MIKNQLLEYIFQDWEVNKLTSLKSRLVLSFFRTSQLLSNLPYPLRLLTYLYQIFTEILFAIELPTDTTIGKNLQLQHGFS
LVINRHATIGRDCIIRHSTTIGNKILSDGSVSSSPTIGDHVEIGCNVVILGPIEIGDNAVIGAGAVVVSNVPAHAVVAGN
PAKVIRLNHFHSGLSYVSRPLA

Specific function: Slime polysaccharide colanic acid biosynthesis. [C]

COG id: COG1045

COG function: function code E; Serine acetyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the transferase hexapeptide repeat family [H]

Homologues:

Organism=Escherichia coli, GI1788371, Length=136, Percent_Identity=41.9117647058824, Blast_Score=105, Evalue=2e-24,
Organism=Escherichia coli, GI1790035, Length=158, Percent_Identity=32.9113924050633, Blast_Score=72, Evalue=2e-14,
Organism=Escherichia coli, GI1786537, Length=106, Percent_Identity=36.7924528301887, Blast_Score=64, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR018357
- InterPro:   IPR005881
- InterPro:   IPR011004 [H]

Pfam domain/function: NA

EC number: 2.3.1.- [C]

Molecular weight: Translated: 19929; Mature: 19929

Theoretical pI: Translated: 8.71; Mature: 8.71

Prosite motif: PS00101 HEXAPEP_TRANSFERASES

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.1 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.6 %Cys+Met (Translated Protein)
1.1 %Cys     (Mature Protein)
0.5 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MIKNQLLEYIFQDWEVNKLTSLKSRLVLSFFRTSQLLSNLPYPLRLLTYLYQIFTEILFA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHE
IELPTDTTIGKNLQLQHGFSLVINRHATIGRDCIIRHSTTIGNKILSDGSVSSSPTIGDH
EECCCCCCCCCCEEECCCEEEEEECCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCE
VEIGCNVVILGPIEIGDNAVIGAGAVVVSNVPAHAVVAGNPAKVIRLNHFHSGLSYVSRP
EEECCCEEEEECEEECCCEEEECCEEEEECCCCEEEEECCCEEEEEEHHHHHHHHHHHCC
LA
CC
>Mature Secondary Structure
MIKNQLLEYIFQDWEVNKLTSLKSRLVLSFFRTSQLLSNLPYPLRLLTYLYQIFTEILFA
CCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHE
IELPTDTTIGKNLQLQHGFSLVINRHATIGRDCIIRHSTTIGNKILSDGSVSSSPTIGDH
EECCCCCCCCCCEEECCCEEEEEECCCCCCCCEEEECCCHHHHHHHCCCCCCCCCCCCCE
VEIGCNVVILGPIEIGDNAVIGAGAVVVSNVPAHAVVAGNPAKVIRLNHFHSGLSYVSRP
EEECCCEEEEECEEECCCEEEECCEEEEECCCCEEEEECCCEEEEEEHHHHHHHHHHHCC
LA
CC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]