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The map label for this gene is yibD [C]

Identifier: 158338810

GI number: 158338810

Start: 5800679

End: 5801662

Strand: Reverse

Name: yibD [C]

Synonym: AM1_5721

Alternate gene names: 158338810

Gene position: 5801662-5800679 (Counterclockwise)

Preceding gene: 158338811

Following gene: 158338809

Centisome position: 89.21

GC content: 41.16

Gene sequence:

>984_bases
ATGGTTAAAGTTTCAGTTATTATCACAACTTTTAATTCGATGCGTTTCTTTCCTGAAACGTTAGAAAGTGTTTTGAAACA
GACTTTCTCTGATATTGAAGTCATCATTGTTGATGACGGTAGTTCTGATGGCATTTCTGATTGGATTACTTCTGTTGTAG
ATTCGAGGGTCGTGTTCCACGCCCAATCCAATCAAGGTGTGTCCTCAGCCCGAAATACCGGCATCAGGCTGGCACGGGGA
GAATACATCGCTTTTTTAGATGGTGATGATTTTTGGGCTCCTACTAAGTTAGAGCAGCAAGTTAGAGTGTTAGCGCTTGA
AGATGAGGTGGGGTTGGTTCATACCTGGCTGGCCTTGATGGATGAAGAAAGTCGGCTCACGGGTAGAGTCATGAAACCTC
AGAGTGAAGGTGCAATATGGGAGGAAATTGTCGAATCCAATATGATTGCCTGTTCTTCAGTAATGGTAAGGCGGTCTTGT
TTAGATGTTGTTGGTATTTTTGATTCAGCATTGATAGTTGCTGAAGATTGGGATCTATGGATCCGAGTTGCAGCAGTCTG
TCGGATTTCTGTGATTAAAGATCCGTTGGTTCAATACAGAATTCACCCTTCGAGCAAATCGAAACGTTATCCAGAAATGG
TTGAGGATTTTAGAACGATTATTGAGCGGGCTTTTCAATCTGTTCCCTATGATTATTTACCGATTAGAAACCGGAGTTAT
GGACGCGTAAATTTGTGTATTGCTTGGAAATGTATTCAGGCTAAAGAACCAGACTTTAAAAAAGCGGACTTCTTCTGTCA
GCAGGCAATAAACCACTATCCAAACTTGCGATTTTCTAGAGAGTTTATTTCATTCTCTATTGCAAATACCCTGATGCAAT
TGGTGGGTATGAAAAGTTACGTTTGGTGTTTGAGTCTGTTCAATACTGTTCGGAAAATTTTCTCGCGAAATCATGCGCTT
AGCCCCGTTGGTCATTCTAGTTAA

Upstream 100 bases:

>100_bases
AAACGAATATTGCAAGAGGTCTAGTGGATGATCAATTTCAAGAAATTGTTTACTTCCACTTTATTGAATCCATAAAAAAC
ATTAGTACTGAAGTTATCTA

Downstream 100 bases:

>100_bases
TCGTTTGATATGTTTTCAGATTTACGTATTGCTATTCGGAATCTCTTAAAAGCAACGGCACTTTGGCAGGATAATCGATT
GATCCTGAGAGAATTTAAAT

Product: glycosyl transferase family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 327; Mature: 327

Protein sequence:

>327_residues
MVKVSVIITTFNSMRFFPETLESVLKQTFSDIEVIIVDDGSSDGISDWITSVVDSRVVFHAQSNQGVSSARNTGIRLARG
EYIAFLDGDDFWAPTKLEQQVRVLALEDEVGLVHTWLALMDEESRLTGRVMKPQSEGAIWEEIVESNMIACSSVMVRRSC
LDVVGIFDSALIVAEDWDLWIRVAAVCRISVIKDPLVQYRIHPSSKSKRYPEMVEDFRTIIERAFQSVPYDYLPIRNRSY
GRVNLCIAWKCIQAKEPDFKKADFFCQQAINHYPNLRFSREFISFSIANTLMQLVGMKSYVWCLSLFNTVRKIFSRNHAL
SPVGHSS

Sequences:

>Translated_327_residues
MVKVSVIITTFNSMRFFPETLESVLKQTFSDIEVIIVDDGSSDGISDWITSVVDSRVVFHAQSNQGVSSARNTGIRLARG
EYIAFLDGDDFWAPTKLEQQVRVLALEDEVGLVHTWLALMDEESRLTGRVMKPQSEGAIWEEIVESNMIACSSVMVRRSC
LDVVGIFDSALIVAEDWDLWIRVAAVCRISVIKDPLVQYRIHPSSKSKRYPEMVEDFRTIIERAFQSVPYDYLPIRNRSY
GRVNLCIAWKCIQAKEPDFKKADFFCQQAINHYPNLRFSREFISFSIANTLMQLVGMKSYVWCLSLFNTVRKIFSRNHAL
SPVGHSS
>Mature_327_residues
MVKVSVIITTFNSMRFFPETLESVLKQTFSDIEVIIVDDGSSDGISDWITSVVDSRVVFHAQSNQGVSSARNTGIRLARG
EYIAFLDGDDFWAPTKLEQQVRVLALEDEVGLVHTWLALMDEESRLTGRVMKPQSEGAIWEEIVESNMIACSSVMVRRSC
LDVVGIFDSALIVAEDWDLWIRVAAVCRISVIKDPLVQYRIHPSSKSKRYPEMVEDFRTIIERAFQSVPYDYLPIRNRSY
GRVNLCIAWKCIQAKEPDFKKADFFCQQAINHYPNLRFSREFISFSIANTLMQLVGMKSYVWCLSLFNTVRKIFSRNHAL
SPVGHSS

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 2 family [H]

Homologues:

Organism=Escherichia coli, GI1790044, Length=146, Percent_Identity=34.2465753424658, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI1788372, Length=192, Percent_Identity=27.6041666666667, Blast_Score=77, Evalue=2e-15,
Organism=Escherichia coli, GI1787259, Length=185, Percent_Identity=30.2702702702703, Blast_Score=64, Evalue=2e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001173 [H]

Pfam domain/function: PF00535 Glycos_transf_2 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 37329; Mature: 37329

Theoretical pI: Translated: 6.51; Mature: 6.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
4.9 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
4.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MVKVSVIITTFNSMRFFPETLESVLKQTFSDIEVIIVDDGSSDGISDWITSVVDSRVVFH
CEEEEEEEEECCCHHCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCCEEEE
AQSNQGVSSARNTGIRLARGEYIAFLDGDDFWAPTKLEQQVRVLALEDEVGLVHTWLALM
ECCCCCCHHHHCCCEEEECCCEEEEECCCCCCCCCHHHCCEEEEEEECCCHHHHHHHHHH
DEESRLTGRVMKPQSEGAIWEEIVESNMIACSSVMVRRSCLDVVGIFDSALIVAEDWDLW
CCCCHHHCCEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHH
IRVAAVCRISVIKDPLVQYRIHPSSKSKRYPEMVEDFRTIIERAFQSVPYDYLPIRNRSY
HHHHHHHHHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
GRVNLCIAWKCIQAKEPDFKKADFFCQQAINHYPNLRFSREFISFSIANTLMQLVGMKSY
CEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCHHHH
VWCLSLFNTVRKIFSRNHALSPVGHSS
HHHHHHHHHHHHHHHCCCCCCCCCCCC
>Mature Secondary Structure
MVKVSVIITTFNSMRFFPETLESVLKQTFSDIEVIIVDDGSSDGISDWITSVVDSRVVFH
CEEEEEEEEECCCHHCCHHHHHHHHHHHHCCEEEEEEECCCCCCHHHHHHHHHCCCEEEE
AQSNQGVSSARNTGIRLARGEYIAFLDGDDFWAPTKLEQQVRVLALEDEVGLVHTWLALM
ECCCCCCHHHHCCCEEEECCCEEEEECCCCCCCCCHHHCCEEEEEEECCCHHHHHHHHHH
DEESRLTGRVMKPQSEGAIWEEIVESNMIACSSVMVRRSCLDVVGIFDSALIVAEDWDLW
CCCCHHHCCEECCCCCCHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHCCEEEEEECHHHH
IRVAAVCRISVIKDPLVQYRIHPSSKSKRYPEMVEDFRTIIERAFQSVPYDYLPIRNRSY
HHHHHHHHHHHHHCCHHEEEECCCCCCCCCHHHHHHHHHHHHHHHHHCCCCEECCCCCCC
GRVNLCIAWKCIQAKEPDFKKADFFCQQAINHYPNLRFSREFISFSIANTLMQLVGMKSY
CEEEEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCEEHHHHHHHHHHHHHHHHHCHHHH
VWCLSLFNTVRKIFSRNHALSPVGHSS
HHHHHHHHHHHHHHHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11557893 [H]