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The map label for this gene is lytB [H]

Identifier: 158338719

GI number: 158338719

Start: 5687423

End: 5689252

Strand: Direct

Name: lytB [H]

Synonym: AM1_5627

Alternate gene names: 158338719

Gene position: 5687423-5689252 (Clockwise)

Preceding gene: 158338716

Following gene: 158338723

Centisome position: 87.45

GC content: 46.89

Gene sequence:

>1830_bases
GTGCCCATATTGGCAAGTGCTAGTGTGTGTTTGGTTTTCGATGGGGCCGTATTAGAGCTATTTTCGATATCTTCTGGTTG
GAATAGCTCGGGTCAAGTATGGGCTCAAGCCGTTAATACACAACCCCTTAATCCTCGCATCAAAGTCAGTATTAAGCAGC
GTTTTGGTCGCAAACCTACGGATAAACTGACGGTTGAAGCGCTTCCAGGGGACCAACTGACCCTTCAATTTACGACGGGT
AAACGGCTACAGACCCTCACTACAAATAAAGTTGAGTTTGCGATTACGCCCATTCCCTTAAAGCAGCCTAGATGGGAAGA
ACGGGTGGTTTTGAGTGTTCATCGGAGTTTTGAAACAGCAGAAACCAAGGCGAATGAATTGAAGACTTTGGGAATTCCGG
TGGAAATTGCCCAGCCCAAACAGTGGCAGGTGTGGGCAAAGCGCGATCAATATCCCACTTCAGCCGATCGGATTCTCTTA
ATCGACACCCTGAAGCAACAAGGCTATGACAATGTGTTTCTCCATCGGCGACGGTTGCGTGACAAGCCACAGCTCAGTTT
TGTCACCAATGGTACTCAATTCAAACGCAGTATTGTCAGTATCACCAGTAAGAAACAGCAGTTTCAGGTGGGCGACGAGC
TGCATTATGGCAGTTTAAGATTTCAGCCCAATACCTATGGGACTTATACCTTGGTGAATAGGGTGCCAACGGAAACCTAT
CTTCGAGGGGTTGTTCCCTATGAAATTGGCTTTAATGCGCCCACGACGGCCATTGAGGCGCAAACCATTATTGCCCGCAC
CTATGCTTTGCGTAATCTGAGACGTTTTCAGATAGATGGATATGAGTTATGTGCGGATACCCAATGCCAAGTTTATAAAG
GAATTGCTAAAACCGATCCCATTGTGGATCGCGCCATTAAAGCGACAACGGGACAGGTGCTAACCCATAACGATGAGCTA
GTGGATGCCCTTTATTCTTCCACCACGGGTGGAGTGACGGCTGCTTTTCAGGAGGTTTGGGAAGGAACCCCTCGCCCTTA
TCTAACGGCAAAAATTGATGCCTTACCCAGGGGCACGTGGGATTTGACCACCCGCAGCTTGGCAGAAGAGTCGAATTTGA
AAGCCTTTATTAACCTGAAACAAGGGTTTAATGAAGCGTCTTGGAAGACCTTTCGTTGGCAGACAGAAACCCCTATTGCT
GAACTAAATGGGTTCTTGCGGAAATTTCTGCGTCAGACTAAGCATCCCTTGGCTAATTTCAAAACCATTCAAAAGCTGGA
AGTGGTGGAGAGATCCCACGGTGGCAGAGTCCAGAAATTGCAGGTCACCACGGATATAGGTACTTTGGTCTTAGCCAAGG
ATGATATTTTACGGGGATTTGAAGCGCCCAATAGCTTGCTCTTTTATGTTGAACCTAGGTATCGAACCGTAAAGCCTAAG
CCAGCGGACACGACTCAATCCAACCCGGAATCGGTGCAGTTGACTAGTTCAACGCCAGTTGCTAAACCTCAGAAAATTCT
TAAGGGATACGCTTTTATTGGTGGAGGCTTTGGTCATGGTGTTGGACTAAGCCAGACGGGATCGTATCACCTCAGTAATT
TAGGCTGGTCAGCGACTAAAATCCTCAATTTTTATTATCCTGGGACAACAGTTCAACCCTTGAATGAAAGCATTGTATTT
TGGCAGCAGCCTTCTATTCCTGTGGTTCCTAGCCAAACAGTTCCCAATGAACTCAAGCCACAGAGCAATCAAAGTAACCG
GCTGATTAGCCATAAGATGCCGTTCCTGAAATCCTTCCAATGGGTATGGGATTGGATACCGTTTTTGTAG

Upstream 100 bases:

>100_bases
ATCCCTTGTGAACTCTATGGTGCGAACTATCGTAAATATGACTGGAAATTTGGCTCAGCCGTTCCCCTCTCTACTCGGAA
GCTTTAGACGTCGTTGGTGG

Downstream 100 bases:

>100_bases
AGAGAGTTCAGAACGGTTCGAAAAAAAGATCTGAGGTTTAAGAGATACGGGATACTGGCTGGGCTTTGGTTTCTGATTCT
ACGGAGACCACAGGAATATC

Product: amidase enhancer

Products: NA

Alternate protein names: Cell wall-associated polypeptide CWBP76; CWBP76; Modifier protein of major autolysin [H]

Number of amino acids: Translated: 609; Mature: 608

Protein sequence:

>609_residues
MPILASASVCLVFDGAVLELFSISSGWNSSGQVWAQAVNTQPLNPRIKVSIKQRFGRKPTDKLTVEALPGDQLTLQFTTG
KRLQTLTTNKVEFAITPIPLKQPRWEERVVLSVHRSFETAETKANELKTLGIPVEIAQPKQWQVWAKRDQYPTSADRILL
IDTLKQQGYDNVFLHRRRLRDKPQLSFVTNGTQFKRSIVSITSKKQQFQVGDELHYGSLRFQPNTYGTYTLVNRVPTETY
LRGVVPYEIGFNAPTTAIEAQTIIARTYALRNLRRFQIDGYELCADTQCQVYKGIAKTDPIVDRAIKATTGQVLTHNDEL
VDALYSSTTGGVTAAFQEVWEGTPRPYLTAKIDALPRGTWDLTTRSLAEESNLKAFINLKQGFNEASWKTFRWQTETPIA
ELNGFLRKFLRQTKHPLANFKTIQKLEVVERSHGGRVQKLQVTTDIGTLVLAKDDILRGFEAPNSLLFYVEPRYRTVKPK
PADTTQSNPESVQLTSSTPVAKPQKILKGYAFIGGGFGHGVGLSQTGSYHLSNLGWSATKILNFYYPGTTVQPLNESIVF
WQQPSIPVVPSQTVPNELKPQSNQSNRLISHKMPFLKSFQWVWDWIPFL

Sequences:

>Translated_609_residues
MPILASASVCLVFDGAVLELFSISSGWNSSGQVWAQAVNTQPLNPRIKVSIKQRFGRKPTDKLTVEALPGDQLTLQFTTG
KRLQTLTTNKVEFAITPIPLKQPRWEERVVLSVHRSFETAETKANELKTLGIPVEIAQPKQWQVWAKRDQYPTSADRILL
IDTLKQQGYDNVFLHRRRLRDKPQLSFVTNGTQFKRSIVSITSKKQQFQVGDELHYGSLRFQPNTYGTYTLVNRVPTETY
LRGVVPYEIGFNAPTTAIEAQTIIARTYALRNLRRFQIDGYELCADTQCQVYKGIAKTDPIVDRAIKATTGQVLTHNDEL
VDALYSSTTGGVTAAFQEVWEGTPRPYLTAKIDALPRGTWDLTTRSLAEESNLKAFINLKQGFNEASWKTFRWQTETPIA
ELNGFLRKFLRQTKHPLANFKTIQKLEVVERSHGGRVQKLQVTTDIGTLVLAKDDILRGFEAPNSLLFYVEPRYRTVKPK
PADTTQSNPESVQLTSSTPVAKPQKILKGYAFIGGGFGHGVGLSQTGSYHLSNLGWSATKILNFYYPGTTVQPLNESIVF
WQQPSIPVVPSQTVPNELKPQSNQSNRLISHKMPFLKSFQWVWDWIPFL
>Mature_608_residues
PILASASVCLVFDGAVLELFSISSGWNSSGQVWAQAVNTQPLNPRIKVSIKQRFGRKPTDKLTVEALPGDQLTLQFTTGK
RLQTLTTNKVEFAITPIPLKQPRWEERVVLSVHRSFETAETKANELKTLGIPVEIAQPKQWQVWAKRDQYPTSADRILLI
DTLKQQGYDNVFLHRRRLRDKPQLSFVTNGTQFKRSIVSITSKKQQFQVGDELHYGSLRFQPNTYGTYTLVNRVPTETYL
RGVVPYEIGFNAPTTAIEAQTIIARTYALRNLRRFQIDGYELCADTQCQVYKGIAKTDPIVDRAIKATTGQVLTHNDELV
DALYSSTTGGVTAAFQEVWEGTPRPYLTAKIDALPRGTWDLTTRSLAEESNLKAFINLKQGFNEASWKTFRWQTETPIAE
LNGFLRKFLRQTKHPLANFKTIQKLEVVERSHGGRVQKLQVTTDIGTLVLAKDDILRGFEAPNSLLFYVEPRYRTVKPKP
ADTTQSNPESVQLTSSTPVAKPQKILKGYAFIGGGFGHGVGLSQTGSYHLSNLGWSATKILNFYYPGTTVQPLNESIVFW
QQPSIPVVPSQTVPNELKPQSNQSNRLISHKMPFLKSFQWVWDWIPFL

Specific function: Possibly involved in cell wall metabolism during spore formation. Enhances the amidase activity approximately threefold [H]

COG id: COG2385

COG function: function code D; Sporulation protein and related proteins

Gene ontology:
GO:0030435: Amidase enhancer, putative

Cell location: Cell membrane; Peripheral membrane protein. Secreted, cell wall. Note=Cell wall localization shown in PubMed:11987133 [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007253
- InterPro:   IPR013486
- InterPro:   IPR013693 [H]

Pfam domain/function: PF04122 CW_binding_2; PF08486 SpoIID [H]

EC number: NA

Molecular weight: Translated: 68734; Mature: 68603

Theoretical pI: Translated: 10.17; Mature: 10.17

Prosite motif: PS00626 RCC1_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
0.3 %Met     (Translated Protein)
0.8 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
0.2 %Met     (Mature Protein)
0.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPILASASVCLVFDGAVLELFSISSGWNSSGQVWAQAVNTQPLNPRIKVSIKQRFGRKPT
CCCCCCCCEEEEECCHHHEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHCCCCCC
DKLTVEALPGDQLTLQFTTGKRLQTLTTNKVEFAITPIPLKQPRWEERVVLSVHRSFETA
CCEEEEECCCCEEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCHHHEEEEEHHHHHHH
ETKANELKTLGIPVEIAQPKQWQVWAKRDQYPTSADRILLIDTLKQQGYDNVFLHRRRLR
HHHHHHHEEECCEEEECCCCCEEEEECCCCCCCCCCCEEEEEEHHHCCCCHHHHHHHHCC
DKPQLSFVTNGTQFKRSIVSITSKKQQFQVGDELHYGSLRFQPNTYGTYTLVNRVPTETY
CCCCEEEEECCHHHHHHHHHHHCCHHHHCCCCCEEECEEEECCCCCCEEEEEECCCHHHH
LRGVVPYEIGFNAPTTAIEAQTIIARTYALRNLRRFQIDGYELCADTQCQVYKGIAKTDP
HHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCEEECCCCCHHHHHCCCCCCH
IVDRAIKATTGQVLTHNDELVDALYSSTTGGVTAAFQEVWEGTPRPYLTAKIDALPRGTW
HHHHHHHHCCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCH
DLTTRSLAEESNLKAFINLKQGFNEASWKTFRWQTETPIAELNGFLRKFLRQTKHPLANF
HHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHH
KTIQKLEVVERSHGGRVQKLQVTTDIGTLVLAKDDILRGFEAPNSLLFYVEPRYRTVKPK
HHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECHHHHHCCCCCCCEEEEECCCCEECCCC
PADTTQSNPESVQLTSSTPVAKPQKILKGYAFIGGGFGHGVGLSQTGSYHLSNLGWSATK
CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCEEECCCCCCEEE
ILNFYYPGTTVQPLNESIVFWQQPSIPVVPSQTVPNELKPQSNQSNRLISHKMPFLKSFQ
EEEEECCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHH
WVWDWIPFL
HHHHHHCCC
>Mature Secondary Structure 
PILASASVCLVFDGAVLELFSISSGWNSSGQVWAQAVNTQPLNPRIKVSIKQRFGRKPT
CCCCCCCEEEEECCHHHEEEECCCCCCCCCCEEEEEECCCCCCCCEEEEEHHHCCCCCC
DKLTVEALPGDQLTLQFTTGKRLQTLTTNKVEFAITPIPLKQPRWEERVVLSVHRSFETA
CCEEEEECCCCEEEEEEECCCEEEEEECCCEEEEEECCCCCCCCCHHHEEEEEHHHHHHH
ETKANELKTLGIPVEIAQPKQWQVWAKRDQYPTSADRILLIDTLKQQGYDNVFLHRRRLR
HHHHHHHEEECCEEEECCCCCEEEEECCCCCCCCCCCEEEEEEHHHCCCCHHHHHHHHCC
DKPQLSFVTNGTQFKRSIVSITSKKQQFQVGDELHYGSLRFQPNTYGTYTLVNRVPTETY
CCCCEEEEECCHHHHHHHHHHHCCHHHHCCCCCEEECEEEECCCCCCEEEEEECCCHHHH
LRGVVPYEIGFNAPTTAIEAQTIIARTYALRNLRRFQIDGYELCADTQCQVYKGIAKTDP
HHCCCCEEECCCCCCCHHHHHHHHHHHHHHHHHHEEECCCEEECCCCCHHHHHCCCCCCH
IVDRAIKATTGQVLTHNDELVDALYSSTTGGVTAAFQEVWEGTPRPYLTAKIDALPRGTW
HHHHHHHHCCCCEEECCHHHHHHHHHCCCCCHHHHHHHHHCCCCCCEEEEEEECCCCCCH
DLTTRSLAEESNLKAFINLKQGFNEASWKTFRWQTETPIAELNGFLRKFLRQTKHPLANF
HHHHHHHHHCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCHHHH
KTIQKLEVVERSHGGRVQKLQVTTDIGTLVLAKDDILRGFEAPNSLLFYVEPRYRTVKPK
HHHHHHHHHHHCCCCCEEEEEEEECCCEEEEECHHHHHCCCCCCCEEEEECCCCEECCCC
PADTTQSNPESVQLTSSTPVAKPQKILKGYAFIGGGFGHGVGLSQTGSYHLSNLGWSATK
CCCCCCCCCCEEEEECCCCCCCHHHHHHHHHEEECCCCCCCCCCCCCCEEECCCCCCEEE
ILNFYYPGTTVQPLNESIVFWQQPSIPVVPSQTVPNELKPQSNQSNRLISHKMPFLKSFQ
EEEEECCCCEECCCCCCEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCHHHHHH
WVWDWIPFL
HHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1357079; 1356138; 9384377 [H]