| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158338711
Identifier: 158338711
GI number: 158338711
Start: 5678389
End: 5680050
Strand: Direct
Name: 158338711
Synonym: AM1_5619
Alternate gene names: NA
Gene position: 5678389-5680050 (Clockwise)
Preceding gene: 158338710
Following gene: 158338712
Centisome position: 87.31
GC content: 52.83
Gene sequence:
>1662_bases GTGCCTGCAACTCCGCGTACTCATACACAATCTGCTCATTCTCAAACCTCTCGACCGCTACTTAAACTCCGGTCTAGTCT GAATTTGCTGCTGTTGGTGGGTATCGCTACCACAGTAGTGGGCTTGGCTTGGTTAAGTTACCAAGTCATTACGGATCCAG ATGTGGCGTTTTGGTTGAATCAGTATTTGCCAACCACAAAAGGGAAACAAACCGCTGCCCATCAACCCCGTACCTTGCAG CAAATTTTGAAGCGTCTCCAGGATCAGAAACAGTCGCCCGGAAAGCCAATTGTGTTAGCGGCGAATGGCAATACCAATCT TTCCCGACCCGTCACTAAAGATATTTTGGTCCCTATCTATGGCAAGAAGTGTTCTCGGCCTCCTTGCCAGAACATCCAAT CTTTGCAGGTATACCGTTCATTAAAACTGCCCTCTCTCCTGAGACTGTTCCAGGGCAAACGCTATTATCGTTTGTTGGAT CGGATGACGGTGCGTGGTCCCACGGAAGAACAGCTAGTGAGCTTAGCCCGTAATCCACGTTTGGTGACAGGGTCCACCCG GCCTTTAAATTTATCTCGGGTCGAAGTTTATAATCCTGCCCCTAAGCCAGGGGCTTGGTTACGGTTAACAGGGCTGAGGA CAGAAGGGAGTGCAACGGCTACCTATGGCCAAGTTTTATATTTCCATCCTGATGAAGCTCGGTTGGTCTTGATGTTGAAT TGGGCTAGCCCCTCGGGGGAATATCCTCAATGGCGTCAAGTGACGGGGGATCCGCAGCCAGAATTGGTCGTCAAACAAAC AGTGGGTCTAGAGCCACAATATGCAGTCTATTGGCTGCGTCCTGCGCCAACAGGTGACTTGCAGGTAGAACATATCTCCC TAGCCAAGCCCGCCTTCGCCGATCCAGGCTATACCCAAAGCTTGTTGCTGGCTCGAAGTGGTTTATGGTCTCCAGCTCAA AAGCGGTTGTTGGCGGTCAAAAAAAGGCAGTTGCGTCGGTGGTCGCCTAAGGCTCAAGCCCAATTGGACTATATCAATCT CCATGCGGCTGTAGCCAAGTCTCAAGCCCAGCAAATTTCGGCGAGTCGAGTGCAAACGATTGTGGCTCGGCTGGTGAATG GAGAATGGAGTGCGGCCCTGAAGCTCTTTCAAGCCCCCCAAACGGATCCAGTAGAAGTGAGGGCCATGCTGGCTACCGAT CCAGGGCGCTTATTTGCACGAATAGAAGCTTCATTAAAGGTCAATCCCAAGAATCAAGATGCGATCGCATGGGGTACCCT TATCCGTCATGTACAGGATGATCCGAAGACAGCCCTGGTTTGGGCCCAGCAGCGGACGGGAAAAAATAAGACTTCACTTG AGACCATCAAGAAACTGTTGAAACGTCTGGATCAGCCGCGCTATACCCCGAAAGAAACCCCCACTAAGCCCAAGCCCCCC GTTTCCCAAGAAAAGCCTCCCGCCCAGTCTTCTCCAAAAGTCAAGCCTTCCCCCAAGGCTCCGCCTCCCCAGCCCCAGTC ATCCGGGGCTCAACTTTCTTCGCCGGGGTCTTCGCCAGCGCCCCCTAAACCTGCCCCCGTCCCCGAGCAGACTGCACAGC CTGAACCTTCACCGCCACCAGAGGTTGCTCCTGTTCCGGTTGAGGAGACGCCAAGGGAATAG
Upstream 100 bases:
>100_bases TCCGTCATCGTCTTGAAGAGTCTGGATATAGTTTTTAACGTCTGAAGTGAGCACTAATCAAAAATTTTCTCGCCAGGTGC GGAACGGCAAAGTCGTTTAC
Downstream 100 bases:
>100_bases CTGGAAAGACAGGGCTGACTTGAATAAGGTATTCTGGATCTTTCCACTATTTTGGTGCCTTAGCTGTTGTAGTTCCCCAA GCCTGATCTAGAGTCTATGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 553; Mature: 552
Protein sequence:
>553_residues MPATPRTHTQSAHSQTSRPLLKLRSSLNLLLLVGIATTVVGLAWLSYQVITDPDVAFWLNQYLPTTKGKQTAAHQPRTLQ QILKRLQDQKQSPGKPIVLAANGNTNLSRPVTKDILVPIYGKKCSRPPCQNIQSLQVYRSLKLPSLLRLFQGKRYYRLLD RMTVRGPTEEQLVSLARNPRLVTGSTRPLNLSRVEVYNPAPKPGAWLRLTGLRTEGSATATYGQVLYFHPDEARLVLMLN WASPSGEYPQWRQVTGDPQPELVVKQTVGLEPQYAVYWLRPAPTGDLQVEHISLAKPAFADPGYTQSLLLARSGLWSPAQ KRLLAVKKRQLRRWSPKAQAQLDYINLHAAVAKSQAQQISASRVQTIVARLVNGEWSAALKLFQAPQTDPVEVRAMLATD PGRLFARIEASLKVNPKNQDAIAWGTLIRHVQDDPKTALVWAQQRTGKNKTSLETIKKLLKRLDQPRYTPKETPTKPKPP VSQEKPPAQSSPKVKPSPKAPPPQPQSSGAQLSSPGSSPAPPKPAPVPEQTAQPEPSPPPEVAPVPVEETPRE
Sequences:
>Translated_553_residues MPATPRTHTQSAHSQTSRPLLKLRSSLNLLLLVGIATTVVGLAWLSYQVITDPDVAFWLNQYLPTTKGKQTAAHQPRTLQ QILKRLQDQKQSPGKPIVLAANGNTNLSRPVTKDILVPIYGKKCSRPPCQNIQSLQVYRSLKLPSLLRLFQGKRYYRLLD RMTVRGPTEEQLVSLARNPRLVTGSTRPLNLSRVEVYNPAPKPGAWLRLTGLRTEGSATATYGQVLYFHPDEARLVLMLN WASPSGEYPQWRQVTGDPQPELVVKQTVGLEPQYAVYWLRPAPTGDLQVEHISLAKPAFADPGYTQSLLLARSGLWSPAQ KRLLAVKKRQLRRWSPKAQAQLDYINLHAAVAKSQAQQISASRVQTIVARLVNGEWSAALKLFQAPQTDPVEVRAMLATD PGRLFARIEASLKVNPKNQDAIAWGTLIRHVQDDPKTALVWAQQRTGKNKTSLETIKKLLKRLDQPRYTPKETPTKPKPP VSQEKPPAQSSPKVKPSPKAPPPQPQSSGAQLSSPGSSPAPPKPAPVPEQTAQPEPSPPPEVAPVPVEETPRE >Mature_552_residues PATPRTHTQSAHSQTSRPLLKLRSSLNLLLLVGIATTVVGLAWLSYQVITDPDVAFWLNQYLPTTKGKQTAAHQPRTLQQ ILKRLQDQKQSPGKPIVLAANGNTNLSRPVTKDILVPIYGKKCSRPPCQNIQSLQVYRSLKLPSLLRLFQGKRYYRLLDR MTVRGPTEEQLVSLARNPRLVTGSTRPLNLSRVEVYNPAPKPGAWLRLTGLRTEGSATATYGQVLYFHPDEARLVLMLNW ASPSGEYPQWRQVTGDPQPELVVKQTVGLEPQYAVYWLRPAPTGDLQVEHISLAKPAFADPGYTQSLLLARSGLWSPAQK RLLAVKKRQLRRWSPKAQAQLDYINLHAAVAKSQAQQISASRVQTIVARLVNGEWSAALKLFQAPQTDPVEVRAMLATDP GRLFARIEASLKVNPKNQDAIAWGTLIRHVQDDPKTALVWAQQRTGKNKTSLETIKKLLKRLDQPRYTPKETPTKPKPPV SQEKPPAQSSPKVKPSPKAPPPQPQSSGAQLSSPGSSPAPPKPAPVPEQTAQPEPSPPPEVAPVPVEETPRE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 61175; Mature: 61044
Theoretical pI: Translated: 10.87; Mature: 10.87
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPATPRTHTQSAHSQTSRPLLKLRSSLNLLLLVGIATTVVGLAWLSYQVITDPDVAFWLN CCCCCCCCCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHEEEECCCHHHHHHH QYLPTTKGKQTAAHQPRTLQQILKRLQDQKQSPGKPIVLAANGNTNLSRPVTKDILVPIY HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHEEEEC GKKCSRPPCQNIQSLQVYRSLKLPSLLRLFQGKRYYRLLDRMTVRGPTEEQLVSLARNPR CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCE LVTGSTRPLNLSRVEVYNPAPKPGAWLRLTGLRTEGSATATYGQVLYFHPDEARLVLMLN EEECCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEECEEEEECCCCCEEEEEEE WASPSGEYPQWRQVTGDPQPELVVKQTVGLEPQYAVYWLRPAPTGDLQVEHISLAKPAFA ECCCCCCCCCHHCCCCCCCCCEEEEHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCC DPGYTQSLLLARSGLWSPAQKRLLAVKKRQLRRWSPKAQAQLDYINLHAAVAKSQAQQIS CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHCEEEEEHHHHHHHHHHHHHHH ASRVQTIVARLVNGEWSAALKLFQAPQTDPVEVRAMLATDPGRLFARIEASLKVNPKNQD HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCC AIAWGTLIRHVQDDPKTALVWAQQRTGKNKTSLETIKKLLKRLDQPRYTPKETPTKPKPP HHHHHHHHHHHCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC VSQEKPPAQSSPKVKPSPKAPPPQPQSSGAQLSSPGSSPAPPKPAPVPEQTAQPEPSPPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EVAPVPVEETPRE CCCCCCCCCCCCC >Mature Secondary Structure PATPRTHTQSAHSQTSRPLLKLRSSLNLLLLVGIATTVVGLAWLSYQVITDPDVAFWLN CCCCCCCCCHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHEEEECCCHHHHHHH QYLPTTKGKQTAAHQPRTLQQILKRLQDQKQSPGKPIVLAANGNTNLSRPVTKDILVPIY HHCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEEEECCCCCCCCCCCHHHEEEEC GKKCSRPPCQNIQSLQVYRSLKLPSLLRLFQGKRYYRLLDRMTVRGPTEEQLVSLARNPR CCCCCCCCHHHHHHHHHHHHCCCHHHHHHHCCCHHHHHHHHHHCCCCCHHHHHHHHCCCE LVTGSTRPLNLSRVEVYNPAPKPGAWLRLTGLRTEGSATATYGQVLYFHPDEARLVLMLN EEECCCCCCCCEEEEEECCCCCCCCEEEEEEECCCCCCCEEECEEEEECCCCCEEEEEEE WASPSGEYPQWRQVTGDPQPELVVKQTVGLEPQYAVYWLRPAPTGDLQVEHISLAKPAFA ECCCCCCCCCHHCCCCCCCCCEEEEHHCCCCCCEEEEEECCCCCCCEEEEEEECCCCCCC DPGYTQSLLLARSGLWSPAQKRLLAVKKRQLRRWSPKAQAQLDYINLHAAVAKSQAQQIS CCCCHHHHHHHHCCCCCHHHHHHHHHHHHHHHHCCCCHHCEEEEEHHHHHHHHHHHHHHH ASRVQTIVARLVNGEWSAALKLFQAPQTDPVEVRAMLATDPGRLFARIEASLKVNPKNQD HHHHHHHHHHHHCCCHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEEEEEEECCCCCC AIAWGTLIRHVQDDPKTALVWAQQRTGKNKTSLETIKKLLKRLDQPRYTPKETPTKPKPP HHHHHHHHHHHCCCCCEEEEEEHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC VSQEKPPAQSSPKVKPSPKAPPPQPQSSGAQLSSPGSSPAPPKPAPVPEQTAQPEPSPPP CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC EVAPVPVEETPRE CCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA