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The map label for this gene is 158338640

Identifier: 158338640

GI number: 158338640

Start: 5592540

End: 5594393

Strand: Direct

Name: 158338640

Synonym: AM1_5544

Alternate gene names: NA

Gene position: 5592540-5594393 (Clockwise)

Preceding gene: 158338634

Following gene: 158338647

Centisome position: 85.99

GC content: 45.74

Gene sequence:

>1854_bases
ATGCGTGATCACTACCTTGAACTCCTGGATCAGATTGTTGCAGATACGTTGAAAGGCAATATTCGCTCCAAAGGGCAGAT
TTACCATACCTTAGAAGCTAAGATTGCCTCCGGAACTGGAGAACTCTTTGAAAGATGCTTACAAACACGCATAGATGAAA
TCCAAGCACTGCTAGACGATGACGATGAACTTAAGCAAGCCAAAGCCATCCGTAAGCAAAGAGCCCTCAAGACCATCCAA
GGTGAATGGGAACGATGGCAAAAGCAAAACCAGGGTAATACTATATTGACAAACCTGGTGCAGGCTTTGACCACAGCTCC
TGCTGAACAGAGATTACAGCCCCTACTCAAGGTGTTTGATCCGAACCAAAAAGAAATCTTAACTGTAGAACAACTACATC
AGCTACAAAAATTACTTGAGAAAGTGAGCCATCCCCCTAACGATCTAGAACCTTCTGTATCAACCGCTTTGTTAGAGATT
GCGAGGGGGCTTCAACAAGGGCTGAGCTCATGGCAACAAATTGAGTCCCAAGTTGTGAATTGGATCTACAACCAGAGTCA
AAGCAATCTTGGGTTTGGCAATGGGACTGAACAACAAGGACCCTGGAGTCATTGGGCCAAGACGGTCAATAGTCAATCCC
TCCAGCAAGTCTTCATGGATTTGGCTCAGCATCAGGCAATTACAGAAGCAGGAATCGAACAACCGGTTCAAATTAGCGAC
TGGCTGGAATTGGCGCTTGTTCTGCAGAAACTGCAATCGAACCTTGTCCGTTGGTTCGATCAGCAACCCTATGACGCCAA
AGCAGGAAAACGTCTTTCCATCGCGACCTACTTAACCTTCACCATTGTTTGGGGACAACTTTCACAACGATTTCAACAAT
TAGGACAACCCATTCTGACTGAAGCCTGTTTTCAAATGGCATTGCAAGGGCTAGTCCAATTTGCTCAGCAATCCTACTTC
CCCCTATACGGTGGATTATTTACCGCCCTATCCGGTGAATCATTACAAACCCTCCTAGACTATCTTGATAGTCCCTTGAA
ACAAACCCCTAACACTGGTATAAAAGCTCGTATTCTCATTCTTTTGGGATATACACAACAAGCCCTTGGCCACTATGACC
TAGCCCTCAAATTCCATGATCAGGCTCTGGAGATTGCCCGTATTGCCCAAGATCTTCGTTGTGAAGTTGCCAGTTATAAC
CACTTGAGTCGAACCTATCTCACGCAACAGGACTTTTCTGAAGCGATTACCTGCAGCCAGAGAGCGTTAATTCTGGCTCG
TCAAAGTGGAGATCGATTGGGGGAAGCGAATGCCCTTGCCAACTTTGGTTACAGTGAAGTTCTACAGATTCAGGCCGTAG
ACCCCCTAGATTCCCAGCGATATGAACAAGTCCTTCCTTATCTGGAGCAAGGCTTACAACTTTCTGAACAGCTAGGGGAT
CGACCCAGCCAGGCGCTGTGTACAAATAGCTTGGGTATTGTCCTCGTAATCATGGGTAAATATCAAGCGGCCATTCCAAT
CCTTGAGCAAGGAACCCGTATCGCTGAAGTCATTGGCGATCAATGGCTTGTCAGCCTCAATTATTGCTATTTAGCAGAGG
CGTACCACGAACTCGAGAATATTGAAAAGGCTATCTACACCGGCAGCCTAGCCATGTATTTGATGTTCCAAATTGAATCC
TCAACGTGGCGCCAACCCGCTGGCTTACTGAGTATTCTGTATGGGCAAATTGGTCCCGAAACCTTTCAAGAATACTTGAA
TCAGCTTCGGAAGAAACTGCTCATGGTTATTGGAGTTGATGGTTATGAGTATTTACCAAAACTGTTAGCAGAATATCGAC
AATCCCTAGCTTGA

Upstream 100 bases:

>100_bases
AGTCTATTTTCCCCGATTATTGTGACACCCCGGCAACCGGGCCACTATTGTCTCGCCAATAGTATTTGCTAGGCTGAAAC
CAATTCACACTCATGAACCT

Downstream 100 bases:

>100_bases
AGGATGCATTCTACCACATTTTAAACAATGATTCCCCATTACAAAACGGAACACAAGTGTAAAGAAGTCAAGAAAAGAAT
TGATTTAGAATCTAATAGTT

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Protein; Tetratricopeptide Domain Protein; TPR Domain-Containing Protein

Number of amino acids: Translated: 617; Mature: 617

Protein sequence:

>617_residues
MRDHYLELLDQIVADTLKGNIRSKGQIYHTLEAKIASGTGELFERCLQTRIDEIQALLDDDDELKQAKAIRKQRALKTIQ
GEWERWQKQNQGNTILTNLVQALTTAPAEQRLQPLLKVFDPNQKEILTVEQLHQLQKLLEKVSHPPNDLEPSVSTALLEI
ARGLQQGLSSWQQIESQVVNWIYNQSQSNLGFGNGTEQQGPWSHWAKTVNSQSLQQVFMDLAQHQAITEAGIEQPVQISD
WLELALVLQKLQSNLVRWFDQQPYDAKAGKRLSIATYLTFTIVWGQLSQRFQQLGQPILTEACFQMALQGLVQFAQQSYF
PLYGGLFTALSGESLQTLLDYLDSPLKQTPNTGIKARILILLGYTQQALGHYDLALKFHDQALEIARIAQDLRCEVASYN
HLSRTYLTQQDFSEAITCSQRALILARQSGDRLGEANALANFGYSEVLQIQAVDPLDSQRYEQVLPYLEQGLQLSEQLGD
RPSQALCTNSLGIVLVIMGKYQAAIPILEQGTRIAEVIGDQWLVSLNYCYLAEAYHELENIEKAIYTGSLAMYLMFQIES
STWRQPAGLLSILYGQIGPETFQEYLNQLRKKLLMVIGVDGYEYLPKLLAEYRQSLA

Sequences:

>Translated_617_residues
MRDHYLELLDQIVADTLKGNIRSKGQIYHTLEAKIASGTGELFERCLQTRIDEIQALLDDDDELKQAKAIRKQRALKTIQ
GEWERWQKQNQGNTILTNLVQALTTAPAEQRLQPLLKVFDPNQKEILTVEQLHQLQKLLEKVSHPPNDLEPSVSTALLEI
ARGLQQGLSSWQQIESQVVNWIYNQSQSNLGFGNGTEQQGPWSHWAKTVNSQSLQQVFMDLAQHQAITEAGIEQPVQISD
WLELALVLQKLQSNLVRWFDQQPYDAKAGKRLSIATYLTFTIVWGQLSQRFQQLGQPILTEACFQMALQGLVQFAQQSYF
PLYGGLFTALSGESLQTLLDYLDSPLKQTPNTGIKARILILLGYTQQALGHYDLALKFHDQALEIARIAQDLRCEVASYN
HLSRTYLTQQDFSEAITCSQRALILARQSGDRLGEANALANFGYSEVLQIQAVDPLDSQRYEQVLPYLEQGLQLSEQLGD
RPSQALCTNSLGIVLVIMGKYQAAIPILEQGTRIAEVIGDQWLVSLNYCYLAEAYHELENIEKAIYTGSLAMYLMFQIES
STWRQPAGLLSILYGQIGPETFQEYLNQLRKKLLMVIGVDGYEYLPKLLAEYRQSLA
>Mature_617_residues
MRDHYLELLDQIVADTLKGNIRSKGQIYHTLEAKIASGTGELFERCLQTRIDEIQALLDDDDELKQAKAIRKQRALKTIQ
GEWERWQKQNQGNTILTNLVQALTTAPAEQRLQPLLKVFDPNQKEILTVEQLHQLQKLLEKVSHPPNDLEPSVSTALLEI
ARGLQQGLSSWQQIESQVVNWIYNQSQSNLGFGNGTEQQGPWSHWAKTVNSQSLQQVFMDLAQHQAITEAGIEQPVQISD
WLELALVLQKLQSNLVRWFDQQPYDAKAGKRLSIATYLTFTIVWGQLSQRFQQLGQPILTEACFQMALQGLVQFAQQSYF
PLYGGLFTALSGESLQTLLDYLDSPLKQTPNTGIKARILILLGYTQQALGHYDLALKFHDQALEIARIAQDLRCEVASYN
HLSRTYLTQQDFSEAITCSQRALILARQSGDRLGEANALANFGYSEVLQIQAVDPLDSQRYEQVLPYLEQGLQLSEQLGD
RPSQALCTNSLGIVLVIMGKYQAAIPILEQGTRIAEVIGDQWLVSLNYCYLAEAYHELENIEKAIYTGSLAMYLMFQIES
STWRQPAGLLSILYGQIGPETFQEYLNQLRKKLLMVIGVDGYEYLPKLLAEYRQSLA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI224028289, Length=183, Percent_Identity=30.0546448087432, Blast_Score=75, Evalue=1e-13,
Organism=Homo sapiens, GI164519122, Length=194, Percent_Identity=29.8969072164948, Blast_Score=75, Evalue=1e-13,
Organism=Drosophila melanogaster, GI24650658, Length=161, Percent_Identity=31.6770186335404, Blast_Score=79, Evalue=7e-15,
Organism=Drosophila melanogaster, GI24660950, Length=191, Percent_Identity=29.3193717277487, Blast_Score=69, Evalue=7e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 69840; Mature: 69840

Theoretical pI: Translated: 4.94; Mature: 4.94

Prosite motif: PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
2.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRDHYLELLDQIVADTLKGNIRSKGQIYHTLEAKIASGTGELFERCLQTRIDEIQALLDD
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
DDELKQAKAIRKQRALKTIQGEWERWQKQNQGNTILTNLVQALTTAPAEQRLQPLLKVFD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC
PNQKEILTVEQLHQLQKLLEKVSHPPNDLEPSVSTALLEIARGLQQGLSSWQQIESQVVN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIYNQSQSNLGFGNGTEQQGPWSHWAKTVNSQSLQQVFMDLAQHQAITEAGIEQPVQISD
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
WLELALVLQKLQSNLVRWFDQQPYDAKAGKRLSIATYLTFTIVWGQLSQRFQQLGQPILT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EACFQMALQGLVQFAQQSYFPLYGGLFTALSGESLQTLLDYLDSPLKQTPNTGIKARILI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCCCEEEEEE
LLGYTQQALGHYDLALKFHDQALEIARIAQDLRCEVASYNHLSRTYLTQQDFSEAITCSQ
EECCHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RALILARQSGDRLGEANALANFGYSEVLQIQAVDPLDSQRYEQVLPYLEQGLQLSEQLGD
HHHEEEECCCCCCCCHHHHHHCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
RPSQALCTNSLGIVLVIMGKYQAAIPILEQGTRIAEVIGDQWLVSLNYCYLAEAYHELEN
CCCHHHHHCCCCEEEEEECCHHHHCHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IEKAIYTGSLAMYLMFQIESSTWRQPAGLLSILYGQIGPETFQEYLNQLRKKLLMVIGVD
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
GYEYLPKLLAEYRQSLA
CHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MRDHYLELLDQIVADTLKGNIRSKGQIYHTLEAKIASGTGELFERCLQTRIDEIQALLDD
CCCHHHHHHHHHHHHHHCCCCCCCCCEEEHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
DDELKQAKAIRKQRALKTIQGEWERWQKQNQGNTILTNLVQALTTAPAEQRLQPLLKVFD
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHHHHHC
PNQKEILTVEQLHQLQKLLEKVSHPPNDLEPSVSTALLEIARGLQQGLSSWQQIESQVVN
CCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
WIYNQSQSNLGFGNGTEQQGPWSHWAKTVNSQSLQQVFMDLAQHQAITEAGIEQPVQISD
HHHHCCCCCCCCCCCCCCCCCHHHHHHHHCHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
WLELALVLQKLQSNLVRWFDQQPYDAKAGKRLSIATYLTFTIVWGQLSQRFQQLGQPILT
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHHHHCCHHHH
EACFQMALQGLVQFAQQSYFPLYGGLFTALSGESLQTLLDYLDSPLKQTPNTGIKARILI
HHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCCHHHHHHHHHHCCHHHHCCCCCCEEEEEE
LLGYTQQALGHYDLALKFHDQALEIARIAQDLRCEVASYNHLSRTYLTQQDFSEAITCSQ
EECCHHHHCCCHHHEEEHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
RALILARQSGDRLGEANALANFGYSEVLQIQAVDPLDSQRYEQVLPYLEQGLQLSEQLGD
HHHEEEECCCCCCCCHHHHHHCCHHHHEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHCC
RPSQALCTNSLGIVLVIMGKYQAAIPILEQGTRIAEVIGDQWLVSLNYCYLAEAYHELEN
CCCHHHHHCCCCEEEEEECCHHHHCHHHHCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHH
IEKAIYTGSLAMYLMFQIESSTWRQPAGLLSILYGQIGPETFQEYLNQLRKKLLMVIGVD
HHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCC
GYEYLPKLLAEYRQSLA
CHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA