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The map label for this gene is yadH [H]

Identifier: 158338634

GI number: 158338634

Start: 5586390

End: 5587208

Strand: Direct

Name: yadH [H]

Synonym: AM1_5538

Alternate gene names: 158338634

Gene position: 5586390-5587208 (Clockwise)

Preceding gene: 158338633

Following gene: 158338640

Centisome position: 85.9

GC content: 43.22

Gene sequence:

>819_bases
ATGCCCCAAAAACTAGATTTATCTCTAAGCCATAATTGTTCGTTTCCCCTTGTCCAAGAGATATGGTTTGACAGCTTAAC
CATTTTTTGGGGGGAATGGCTAGATTTGCGTGTAAGGGTCAAGCAAATCATTGCCTCTGGTATGGTTTCTCCGATCATCT
ACATTTTGGCTTTCGGGTTGGGCTTAGGGAATTCTTTAGGCAAACCAACTGTGGGGGATACCTATCTGGAGTTTATCCTG
CCAGGTATGATTGCCCTTTCGTCGATGACGATTTGTTTTGCTGGTACTACTTTCTCTATTTGTGGCGATAGGTTGTATAG
CAAAACCTTTGAAGAGCTTTTGTTGCTGCCCATACATCCTTTAGCCCTCTATCTTGGGAAAGTCATGGCTGGTGTTGCAC
GAGGATTGCTAACATCATCGGCCGTGATCGTAATCGCGATTCTTAGTACAGGTAAGATATTCGGCTTTTTGAATCCGCTG
TTCTTGCTCTTGCTGATCTTAAACTGCTCGGTGTTTGCTGGACTAGGTGTTATTGCAGGTCTAAACGTATCCTCAATCGA
AAGCGTTGGGCTCTATAACAATTTTCTGATCGTACCAATGTCATTTTTAGGGGGAACTTTCTTTGACCCGAGTAGTTTGC
CAATATACTTTAAGGCACTTCTTTACGTTCTACCTTTAACCTACACTAGCCTAGGGTTAAGGGCTGCTGCCTATTTACCA
TTACAGCAATTCCCTTGGTTTACTCTACCCATCTTACTCAGTATGGCCTTGATCCTTGCCATAATTGGAGCTCACCAGTT
CTCCAATCAACAAGACTAA

Upstream 100 bases:

>100_bases
GAGCTGGTAAAATCAAAAAATTATTCAAAGAGCGAGAAAATTCTCCTTCACAACAGAAAATCTGTAACAATTATTAAAGT
TTAAGAATAGTTGTTACACA

Downstream 100 bases:

>100_bases
ACTGCGCTTTTGGGAAAAAATCCGTTTCGAGAATTTGTAATACTTTATTTAACCTCCGGAGATACTAATTGAGTGCTCCT
CGAAGCTAGTTGAATAGAGT

Product: ABC-2 transporter, permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 272; Mature: 271

Protein sequence:

>272_residues
MPQKLDLSLSHNCSFPLVQEIWFDSLTIFWGEWLDLRVRVKQIIASGMVSPIIYILAFGLGLGNSLGKPTVGDTYLEFIL
PGMIALSSMTICFAGTTFSICGDRLYSKTFEELLLLPIHPLALYLGKVMAGVARGLLTSSAVIVIAILSTGKIFGFLNPL
FLLLLILNCSVFAGLGVIAGLNVSSIESVGLYNNFLIVPMSFLGGTFFDPSSLPIYFKALLYVLPLTYTSLGLRAAAYLP
LQQFPWFTLPILLSMALILAIIGAHQFSNQQD

Sequences:

>Translated_272_residues
MPQKLDLSLSHNCSFPLVQEIWFDSLTIFWGEWLDLRVRVKQIIASGMVSPIIYILAFGLGLGNSLGKPTVGDTYLEFIL
PGMIALSSMTICFAGTTFSICGDRLYSKTFEELLLLPIHPLALYLGKVMAGVARGLLTSSAVIVIAILSTGKIFGFLNPL
FLLLLILNCSVFAGLGVIAGLNVSSIESVGLYNNFLIVPMSFLGGTFFDPSSLPIYFKALLYVLPLTYTSLGLRAAAYLP
LQQFPWFTLPILLSMALILAIIGAHQFSNQQD
>Mature_271_residues
PQKLDLSLSHNCSFPLVQEIWFDSLTIFWGEWLDLRVRVKQIIASGMVSPIIYILAFGLGLGNSLGKPTVGDTYLEFILP
GMIALSSMTICFAGTTFSICGDRLYSKTFEELLLLPIHPLALYLGKVMAGVARGLLTSSAVIVIAILSTGKIFGFLNPLF
LLLLILNCSVFAGLGVIAGLNVSSIESVGLYNNFLIVPMSFLGGTFFDPSSLPIYFKALLYVLPLTYTSLGLRAAAYLPL
QQFPWFTLPILLSMALILAIIGAHQFSNQQD

Specific function: Unknown

COG id: COG0842

COG function: function code V; ABC-type multidrug transport system, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-2 domain [H]

Homologues:

Organism=Escherichia coli, GI1786320, Length=207, Percent_Identity=28.9855072463768, Blast_Score=81, Evalue=7e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000412
- InterPro:   IPR013526
- InterPro:   IPR013525 [H]

Pfam domain/function: PF01061 ABC2_membrane [H]

EC number: NA

Molecular weight: Translated: 29654; Mature: 29523

Theoretical pI: Translated: 6.76; Mature: 6.76

Prosite motif: PS51012 ABC_TM2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
4.0 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC
>Mature Secondary Structure 
PQKLDLSLSHNCSFPLVQEIWFDSLTIFWGEWLDLRVRVKQIIASGMVSPIIYILAFGL
CCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
GLGNSLGKPTVGDTYLEFILPGMIALSSMTICFAGTTFSICGDRLYSKTFEELLLLPIHP
CCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHEECCHHHHHHHHHHHHHHHHHHHCCCHH
LALYLGKVMAGVARGLLTSSAVIVIAILSTGKIFGFLNPLFLLLLILNCSVFAGLGVIAG
HHHHHHHHHHHHHHHHHHCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
LNVSSIESVGLYNNFLIVPMSFLGGTFFDPSSLPIYFKALLYVLPLTYTSLGLRAAAYLP
CCHHHHHHHCHHCCHHEEEHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCC
LQQFPWFTLPILLSMALILAIIGAHQFSNQQD
HHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]