| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338616
Identifier: 158338616
GI number: 158338616
Start: 5566465
End: 5567415
Strand: Reverse
Name: 158338616
Synonym: AM1_5519
Alternate gene names: NA
Gene position: 5567415-5566465 (Counterclockwise)
Preceding gene: 158338617
Following gene: 158338614
Centisome position: 85.6
GC content: 47.63
Gene sequence:
>951_bases ATGACTCTGAAACAGGGCATTTCCCATACCGCCTTACTCCTGAGCCTCTGCTTATATATTTTCTATCTATGCCCCTGGGT CAATCGTTCATTCCCGTTAACCTTAGGAATGGAGTTTTGGCCTTATGTTTGTGTGATTCCTTGTTTAGGTCTTGGATTTA GATTGTTTCACCTAGACCTGCGCAGGCAGCGACTAGGGCTAGGATTGGCATCACTTCTACTGGCTATTAGTCTTGCTCCT TGGATTCAATGGCTAGGACTACCCTCCCTAGGGGCGCAACCATCAGGATTGCGGGTGATGTCTTACAACATCTGGACCCA AAATCAAGATTATGGTGCCATTCAACAGTCTATTCAGCAGGAAGATCCCGATATTCTGTTTCTCACAGAGATTACGAAGT CGGCCATGCGTGATTTGGAAAACCGCTTGGATTATCCCTATAGTCAACGCTCTAATCGGGGGTCTAATGCATTTTTTAGT CGCTACCCTATCCTCTCAGCGACTCCGGAATATCCCAATGTGACGGAGCATGGTCTTACGTTTAGCTTAGTTACTCAAAT TCAAACACCCCAGGAGGTGCTGACGGTCGTGGGGATTCATCCCCCCATTCCGCTAACCCGATCCTCATTTGCCGTTCGCA ACCAACAGTTTGAACGCCTAGCCCCCTTTATTCAGCAGGTTCCCAATCGTGTCATCGTTCTGGGGGATTTCAATACCTCT CCCTGGTCACCTTATTTCGATCAGTTCTTACAGGAGGCAAATTTATGGAGTGCAACCCGAGGACAAGGCATCTGGGCTAC CTGGAGTTATGAGTCTTCTTTACCCCATTGGTTTGCCAAGATTCCTATCGATCATATTACGAACCGTGGGTTTGTCTGTA TGGATGCTTGGGCAGGCCGTGCCAATGGTTCTGATCATCGGCCTGTTATTGCGGAATTAAAACCCGTTTGA
Upstream 100 bases:
>100_bases AGGCTAGGGTTAAAGGGCAGGCTCAGGTTACATTGCTTTCGAAATTGCCCCAGTATAATCGAACCAATCCTTGTCGATAC CCAGCCTCTAAACCGTTGGC
Downstream 100 bases:
>100_bases AGCAGCAAGTTGATTCATATCATCGACTAGCCATCTTAAGAACCCTTCAGGAGTCAAAGTCTGCAAAAAAATGTCGCATA TTTTCAAGACCATCTGAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family
Number of amino acids: Translated: 316; Mature: 315
Protein sequence:
>316_residues MTLKQGISHTALLLSLCLYIFYLCPWVNRSFPLTLGMEFWPYVCVIPCLGLGFRLFHLDLRRQRLGLGLASLLLAISLAP WIQWLGLPSLGAQPSGLRVMSYNIWTQNQDYGAIQQSIQQEDPDILFLTEITKSAMRDLENRLDYPYSQRSNRGSNAFFS RYPILSATPEYPNVTEHGLTFSLVTQIQTPQEVLTVVGIHPPIPLTRSSFAVRNQQFERLAPFIQQVPNRVIVLGDFNTS PWSPYFDQFLQEANLWSATRGQGIWATWSYESSLPHWFAKIPIDHITNRGFVCMDAWAGRANGSDHRPVIAELKPV
Sequences:
>Translated_316_residues MTLKQGISHTALLLSLCLYIFYLCPWVNRSFPLTLGMEFWPYVCVIPCLGLGFRLFHLDLRRQRLGLGLASLLLAISLAP WIQWLGLPSLGAQPSGLRVMSYNIWTQNQDYGAIQQSIQQEDPDILFLTEITKSAMRDLENRLDYPYSQRSNRGSNAFFS RYPILSATPEYPNVTEHGLTFSLVTQIQTPQEVLTVVGIHPPIPLTRSSFAVRNQQFERLAPFIQQVPNRVIVLGDFNTS PWSPYFDQFLQEANLWSATRGQGIWATWSYESSLPHWFAKIPIDHITNRGFVCMDAWAGRANGSDHRPVIAELKPV >Mature_315_residues TLKQGISHTALLLSLCLYIFYLCPWVNRSFPLTLGMEFWPYVCVIPCLGLGFRLFHLDLRRQRLGLGLASLLLAISLAPW IQWLGLPSLGAQPSGLRVMSYNIWTQNQDYGAIQQSIQQEDPDILFLTEITKSAMRDLENRLDYPYSQRSNRGSNAFFSR YPILSATPEYPNVTEHGLTFSLVTQIQTPQEVLTVVGIHPPIPLTRSSFAVRNQQFERLAPFIQQVPNRVIVLGDFNTSP WSPYFDQFLQEANLWSATRGQGIWATWSYESSLPHWFAKIPIDHITNRGFVCMDAWAGRANGSDHRPVIAELKPV
Specific function: Unknown
COG id: COG3021
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 35986; Mature: 35855
Theoretical pI: Translated: 7.91; Mature: 7.91
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.6 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 3.2 %Cys+Met (Translated Protein) 1.6 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLKQGISHTALLLSLCLYIFYLCPWVNRSFPLTLGMEFWPYVCVIPCLGLGFRLFHLDL CCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH RRQRLGLGLASLLLAISLAPWIQWLGLPSLGAQPSGLRVMSYNIWTQNQDYGAIQQSIQQ HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHH EDPDILFLTEITKSAMRDLENRLDYPYSQRSNRGSNAFFSRYPILSATPEYPNVTEHGLT CCCCEEEEHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHCCCCCCCCCCCCCHHCCCE FSLVTQIQTPQEVLTVVGIHPPIPLTRSSFAVRNQQFERLAPFIQQVPNRVIVLGDFNTS EEEHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC PWSPYFDQFLQEANLWSATRGQGIWATWSYESSLPHWFAKIPIDHITNRGFVCMDAWAGR CCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHCCHHHHCCCCEEEEECCCCC ANGSDHRPVIAELKPV CCCCCCCCCCCCCCCC >Mature Secondary Structure TLKQGISHTALLLSLCLYIFYLCPWVNRSFPLTLGMEFWPYVCVIPCLGLGFRLFHLDL CCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH RRQRLGLGLASLLLAISLAPWIQWLGLPSLGAQPSGLRVMSYNIWTQNQDYGAIQQSIQQ HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHH EDPDILFLTEITKSAMRDLENRLDYPYSQRSNRGSNAFFSRYPILSATPEYPNVTEHGLT CCCCEEEEHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHCCCCCCCCCCCCCHHCCCE FSLVTQIQTPQEVLTVVGIHPPIPLTRSSFAVRNQQFERLAPFIQQVPNRVIVLGDFNTS EEEHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC PWSPYFDQFLQEANLWSATRGQGIWATWSYESSLPHWFAKIPIDHITNRGFVCMDAWAGR CCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHCCHHHHCCCCEEEEECCCCC ANGSDHRPVIAELKPV CCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA