Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

Click here to switch to the map view.

The map label for this gene is 158338616

Identifier: 158338616

GI number: 158338616

Start: 5566465

End: 5567415

Strand: Reverse

Name: 158338616

Synonym: AM1_5519

Alternate gene names: NA

Gene position: 5567415-5566465 (Counterclockwise)

Preceding gene: 158338617

Following gene: 158338614

Centisome position: 85.6

GC content: 47.63

Gene sequence:

>951_bases
ATGACTCTGAAACAGGGCATTTCCCATACCGCCTTACTCCTGAGCCTCTGCTTATATATTTTCTATCTATGCCCCTGGGT
CAATCGTTCATTCCCGTTAACCTTAGGAATGGAGTTTTGGCCTTATGTTTGTGTGATTCCTTGTTTAGGTCTTGGATTTA
GATTGTTTCACCTAGACCTGCGCAGGCAGCGACTAGGGCTAGGATTGGCATCACTTCTACTGGCTATTAGTCTTGCTCCT
TGGATTCAATGGCTAGGACTACCCTCCCTAGGGGCGCAACCATCAGGATTGCGGGTGATGTCTTACAACATCTGGACCCA
AAATCAAGATTATGGTGCCATTCAACAGTCTATTCAGCAGGAAGATCCCGATATTCTGTTTCTCACAGAGATTACGAAGT
CGGCCATGCGTGATTTGGAAAACCGCTTGGATTATCCCTATAGTCAACGCTCTAATCGGGGGTCTAATGCATTTTTTAGT
CGCTACCCTATCCTCTCAGCGACTCCGGAATATCCCAATGTGACGGAGCATGGTCTTACGTTTAGCTTAGTTACTCAAAT
TCAAACACCCCAGGAGGTGCTGACGGTCGTGGGGATTCATCCCCCCATTCCGCTAACCCGATCCTCATTTGCCGTTCGCA
ACCAACAGTTTGAACGCCTAGCCCCCTTTATTCAGCAGGTTCCCAATCGTGTCATCGTTCTGGGGGATTTCAATACCTCT
CCCTGGTCACCTTATTTCGATCAGTTCTTACAGGAGGCAAATTTATGGAGTGCAACCCGAGGACAAGGCATCTGGGCTAC
CTGGAGTTATGAGTCTTCTTTACCCCATTGGTTTGCCAAGATTCCTATCGATCATATTACGAACCGTGGGTTTGTCTGTA
TGGATGCTTGGGCAGGCCGTGCCAATGGTTCTGATCATCGGCCTGTTATTGCGGAATTAAAACCCGTTTGA

Upstream 100 bases:

>100_bases
AGGCTAGGGTTAAAGGGCAGGCTCAGGTTACATTGCTTTCGAAATTGCCCCAGTATAATCGAACCAATCCTTGTCGATAC
CCAGCCTCTAAACCGTTGGC

Downstream 100 bases:

>100_bases
AGCAGCAAGTTGATTCATATCATCGACTAGCCATCTTAAGAACCCTTCAGGAGTCAAAGTCTGCAAAAAAATGTCGCATA
TTTTCAAGACCATCTGAGCC

Product: hypothetical protein

Products: NA

Alternate protein names: Endonuclease/Exonuclease/Phosphatase Family

Number of amino acids: Translated: 316; Mature: 315

Protein sequence:

>316_residues
MTLKQGISHTALLLSLCLYIFYLCPWVNRSFPLTLGMEFWPYVCVIPCLGLGFRLFHLDLRRQRLGLGLASLLLAISLAP
WIQWLGLPSLGAQPSGLRVMSYNIWTQNQDYGAIQQSIQQEDPDILFLTEITKSAMRDLENRLDYPYSQRSNRGSNAFFS
RYPILSATPEYPNVTEHGLTFSLVTQIQTPQEVLTVVGIHPPIPLTRSSFAVRNQQFERLAPFIQQVPNRVIVLGDFNTS
PWSPYFDQFLQEANLWSATRGQGIWATWSYESSLPHWFAKIPIDHITNRGFVCMDAWAGRANGSDHRPVIAELKPV

Sequences:

>Translated_316_residues
MTLKQGISHTALLLSLCLYIFYLCPWVNRSFPLTLGMEFWPYVCVIPCLGLGFRLFHLDLRRQRLGLGLASLLLAISLAP
WIQWLGLPSLGAQPSGLRVMSYNIWTQNQDYGAIQQSIQQEDPDILFLTEITKSAMRDLENRLDYPYSQRSNRGSNAFFS
RYPILSATPEYPNVTEHGLTFSLVTQIQTPQEVLTVVGIHPPIPLTRSSFAVRNQQFERLAPFIQQVPNRVIVLGDFNTS
PWSPYFDQFLQEANLWSATRGQGIWATWSYESSLPHWFAKIPIDHITNRGFVCMDAWAGRANGSDHRPVIAELKPV
>Mature_315_residues
TLKQGISHTALLLSLCLYIFYLCPWVNRSFPLTLGMEFWPYVCVIPCLGLGFRLFHLDLRRQRLGLGLASLLLAISLAPW
IQWLGLPSLGAQPSGLRVMSYNIWTQNQDYGAIQQSIQQEDPDILFLTEITKSAMRDLENRLDYPYSQRSNRGSNAFFSR
YPILSATPEYPNVTEHGLTFSLVTQIQTPQEVLTVVGIHPPIPLTRSSFAVRNQQFERLAPFIQQVPNRVIVLGDFNTSP
WSPYFDQFLQEANLWSATRGQGIWATWSYESSLPHWFAKIPIDHITNRGFVCMDAWAGRANGSDHRPVIAELKPV

Specific function: Unknown

COG id: COG3021

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35986; Mature: 35855

Theoretical pI: Translated: 7.91; Mature: 7.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.6 %Cys     (Translated Protein)
1.6 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
2.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTLKQGISHTALLLSLCLYIFYLCPWVNRSFPLTLGMEFWPYVCVIPCLGLGFRLFHLDL
CCCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
RRQRLGLGLASLLLAISLAPWIQWLGLPSLGAQPSGLRVMSYNIWTQNQDYGAIQQSIQQ
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHH
EDPDILFLTEITKSAMRDLENRLDYPYSQRSNRGSNAFFSRYPILSATPEYPNVTEHGLT
CCCCEEEEHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHCCCCCCCCCCCCCHHCCCE
FSLVTQIQTPQEVLTVVGIHPPIPLTRSSFAVRNQQFERLAPFIQQVPNRVIVLGDFNTS
EEEHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
PWSPYFDQFLQEANLWSATRGQGIWATWSYESSLPHWFAKIPIDHITNRGFVCMDAWAGR
CCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHCCHHHHCCCCEEEEECCCCC
ANGSDHRPVIAELKPV
CCCCCCCCCCCCCCCC
>Mature Secondary Structure 
TLKQGISHTALLLSLCLYIFYLCPWVNRSFPLTLGMEFWPYVCVIPCLGLGFRLFHLDL
CCHHHCHHHHHHHHHHHHHHHHHHHCCCCCCEEECCHHHHHHHHHHHHHHHHHHHHHHH
RRQRLGLGLASLLLAISLAPWIQWLGLPSLGAQPSGLRVMSYNIWTQNQDYGAIQQSIQQ
HHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEEEEEECCCCHHHHHHHHHH
EDPDILFLTEITKSAMRDLENRLDYPYSQRSNRGSNAFFSRYPILSATPEYPNVTEHGLT
CCCCEEEEHHHHHHHHHHHHHHCCCCCHHCCCCCCCCHHHHCCCCCCCCCCCCCHHCCCE
FSLVTQIQTPQEVLTVVGIHPPIPLTRSSFAVRNQQFERLAPFIQQVPNRVIVLGDFNTS
EEEHHHCCCHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCCCC
PWSPYFDQFLQEANLWSATRGQGIWATWSYESSLPHWFAKIPIDHITNRGFVCMDAWAGR
CCCHHHHHHHHHCCCCCCCCCCCEEEEECCCCCCCHHHHHCCHHHHCCCCEEEEECCCCC
ANGSDHRPVIAELKPV
CCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA