Definition Acaryochloris marina MBIC11017 chromosome, complete genome.
Accession NC_009925
Length 6,503,724

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The map label for this gene is 158338394

Identifier: 158338394

GI number: 158338394

Start: 5357404

End: 5357958

Strand: Reverse

Name: 158338394

Synonym: AM1_5292

Alternate gene names: NA

Gene position: 5357958-5357404 (Counterclockwise)

Preceding gene: 158338395

Following gene: 158338393

Centisome position: 82.38

GC content: 50.99

Gene sequence:

>555_bases
ATGTGGACGTTGAGCAAACCGAAAAGGGTCGTCCTTCAACCCGGACAGCGCTCACGGGTAGCGAGTGAGGCTTATAGCTC
TAACTCTGGAAAAGTAGTTGTTTGTGCTGAGTGTCAGAAGTACTTACGCCCAATGCCACCAGAACAACTCTCTGCTCATC
TAACGCCAGCGGAAAAAGTGGCTCAGACAATAGGAAGCTTGAAATTTGCAGGTTGGCAATGCCCAAACTCTTGCCCCAAA
GACGGGTCGGAGAGAATCCATATTCGAGTCTACCGATGGAGACCTGAATCGTTTCGAACCTGCCCAAATTGCCAAGAATT
AACCGTCCAATGCCGTTCAGAAGTACTGGAAAAAGCCACGCCAGATCAATCAGGAACCGTTCATATCGTTGAGCAATGTG
CTTGTTGTGACTATGTCCAGGAATATGACGAAACCATTCAGAGCCCCAAGTCAGACCCATCCCCTGACACTATTGCCGAT
AGCGGGGGGGAATCTTTTGGCGGTGGAGGATTTGGAGGCGGCAGTGGTGGCGGTGGTGCCGGAGGCAGTTGGTAA

Upstream 100 bases:

>100_bases
TTGTGAAGAGGGTTTCTCTGACACTATCCGATTGATGACCAATCTTGTATAACTGCCGGATTATCTTCAAAATCTAGGAC
TAGGTCTGTTGGGGGGAGGC

Downstream 100 bases:

>100_bases
ATCGAGATGTTTCGAGAAGTAGAGACTATGAATCAAAAAAAGCAAATGATTCCAGCCAGTGATGCTCCTGCAATTTTTGA
GCTAGCCTCTCAATACGCCT

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 184; Mature: 184

Protein sequence:

>184_residues
MWTLSKPKRVVLQPGQRSRVASEAYSSNSGKVVVCAECQKYLRPMPPEQLSAHLTPAEKVAQTIGSLKFAGWQCPNSCPK
DGSERIHIRVYRWRPESFRTCPNCQELTVQCRSEVLEKATPDQSGTVHIVEQCACCDYVQEYDETIQSPKSDPSPDTIAD
SGGESFGGGGFGGGSGGGGAGGSW

Sequences:

>Translated_184_residues
MWTLSKPKRVVLQPGQRSRVASEAYSSNSGKVVVCAECQKYLRPMPPEQLSAHLTPAEKVAQTIGSLKFAGWQCPNSCPK
DGSERIHIRVYRWRPESFRTCPNCQELTVQCRSEVLEKATPDQSGTVHIVEQCACCDYVQEYDETIQSPKSDPSPDTIAD
SGGESFGGGGFGGGSGGGGAGGSW
>Mature_184_residues
MWTLSKPKRVVLQPGQRSRVASEAYSSNSGKVVVCAECQKYLRPMPPEQLSAHLTPAEKVAQTIGSLKFAGWQCPNSCPK
DGSERIHIRVYRWRPESFRTCPNCQELTVQCRSEVLEKATPDQSGTVHIVEQCACCDYVQEYDETIQSPKSDPSPDTIAD
SGGESFGGGGFGGGSGGGGAGGSW

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 19816; Mature: 19816

Theoretical pI: Translated: 6.71; Mature: 6.71

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.4 %Cys     (Translated Protein)
1.1 %Met     (Translated Protein)
6.5 %Cys+Met (Translated Protein)
5.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MWTLSKPKRVVLQPGQRSRVASEAYSSNSGKVVVCAECQKYLRPMPPEQLSAHLTPAEKV
CCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCHHHHHCCCCHHHHH
AQTIGSLKFAGWQCPNSCPKDGSERIHIRVYRWRPESFRTCPNCQELTVQCRSEVLEKAT
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHCC
PDQSGTVHIVEQCACCDYVQEYDETIQSPKSDPSPDTIADSGGESFGGGGFGGGSGGGGA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGSW
CCCC
>Mature Secondary Structure
MWTLSKPKRVVLQPGQRSRVASEAYSSNSGKVVVCAECQKYLRPMPPEQLSAHLTPAEKV
CCCCCCCCEEEECCCCHHHHHHHHHCCCCCCEEEHHHHHHHHCCCCHHHHHCCCCHHHHH
AQTIGSLKFAGWQCPNSCPKDGSERIHIRVYRWRPESFRTCPNCQELTVQCRSEVLEKAT
HHHHHHHCCCCCCCCCCCCCCCCCEEEEEEEEECCHHHCCCCCHHHHHHHHHHHHHHHCC
PDQSGTVHIVEQCACCDYVQEYDETIQSPKSDPSPDTIADSGGESFGGGGFGGGSGGGGA
CCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
GGSW
CCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA