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The map label for this gene is lemA [H]

Identifier: 158338393

GI number: 158338393

Start: 5356633

End: 5357397

Strand: Reverse

Name: lemA [H]

Synonym: AM1_5291

Alternate gene names: 158338393

Gene position: 5357397-5356633 (Counterclockwise)

Preceding gene: 158338394

Following gene: 158338392

Centisome position: 82.37

GC content: 44.84

Gene sequence:

>765_bases
ATGTTTCGAGAAGTAGAGACTATGAATCAAAAAAAGCAAATGATTCCAGCCAGTGATGCTCCTGCAATTTTTGAGCTAGC
CTCTCAATACGCCTCTGCGGACCTAGAACATTACTCCAGAACAGAGCTGGAAATGGCCGCTGCAGAAGCTGGCATTCCAG
CCGAGTATATTCCTCAAGCCATTGCCGAAATTCAAGCTCAAAACGCCAAAAAACTAATAAAAAAACAGAATATAAGACAA
TGGATGAGAAAGTGGCTGCTTATAAGCTCTATTGCTATAATGGGGAGTATAGGATGGCTTATCGCGACATATAATGCGAT
TGCCAATCACAAAATTCAGGTGGAAGCTGCTTGGGCGCAAGTCGAGAATCAACGTCAGCGACGGGCAGATCTAATTCCAC
AGTTGGTCAAGGTTACTCAAGCCTACACCACCCATGAAAGCACCCTGATAACAACGCTCATCGAGGCACAACAAGCCTAC
TTAGAAGCGGACAGCCTTGAGCAGCAGCAGGATGCAGTAGAAAAAATAGATCAGGCCATTGATCAGTTTCAAACCTATGC
CCTGACCCATTCAGCTCTAAAATCCAGCCAGCTTTATATCAACCTCCAGTATGAAATCACTGGCACAGAAAATCGGTTGG
CCGTAGAACGAATGCGATATAACCAGGCTGTACAAAGCTTCCAACAGCAACTGCAGGGATTTCCCAATGCAGTCATCGCC
GAGCTTTCAGGTTTTGAATCAAAGCCTTTTCTACAAGCAGATTAA

Upstream 100 bases:

>100_bases
CCCTGACACTATTGCCGATAGCGGGGGGGAATCTTTTGGCGGTGGAGGATTTGGAGGCGGCAGTGGTGGCGGTGGTGCCG
GAGGCAGTTGGTAAATCGAG

Downstream 100 bases:

>100_bases
CGCTGGGCCAGTACGAATAAGCCCAAATGATTAAGGATGCTTTTCCTGGCTTATCAACCCATAGAGACGCTACTTCGTAT
GCGTCGGCAGAATTAATACA

Product: LemA family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 254; Mature: 254

Protein sequence:

>254_residues
MFREVETMNQKKQMIPASDAPAIFELASQYASADLEHYSRTELEMAAAEAGIPAEYIPQAIAEIQAQNAKKLIKKQNIRQ
WMRKWLLISSIAIMGSIGWLIATYNAIANHKIQVEAAWAQVENQRQRRADLIPQLVKVTQAYTTHESTLITTLIEAQQAY
LEADSLEQQQDAVEKIDQAIDQFQTYALTHSALKSSQLYINLQYEITGTENRLAVERMRYNQAVQSFQQQLQGFPNAVIA
ELSGFESKPFLQAD

Sequences:

>Translated_254_residues
MFREVETMNQKKQMIPASDAPAIFELASQYASADLEHYSRTELEMAAAEAGIPAEYIPQAIAEIQAQNAKKLIKKQNIRQ
WMRKWLLISSIAIMGSIGWLIATYNAIANHKIQVEAAWAQVENQRQRRADLIPQLVKVTQAYTTHESTLITTLIEAQQAY
LEADSLEQQQDAVEKIDQAIDQFQTYALTHSALKSSQLYINLQYEITGTENRLAVERMRYNQAVQSFQQQLQGFPNAVIA
ELSGFESKPFLQAD
>Mature_254_residues
MFREVETMNQKKQMIPASDAPAIFELASQYASADLEHYSRTELEMAAAEAGIPAEYIPQAIAEIQAQNAKKLIKKQNIRQ
WMRKWLLISSIAIMGSIGWLIATYNAIANHKIQVEAAWAQVENQRQRRADLIPQLVKVTQAYTTHESTLITTLIEAQQAY
LEADSLEQQQDAVEKIDQAIDQFQTYALTHSALKSSQLYINLQYEITGTENRLAVERMRYNQAVQSFQQQLQGFPNAVIA
ELSGFESKPFLQAD

Specific function: Unknown

COG id: COG1704

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Single-pass membrane protein (Potential) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the LemA family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007156 [H]

Pfam domain/function: PF04011 LemA [H]

EC number: NA

Molecular weight: Translated: 28810; Mature: 28810

Theoretical pI: Translated: 4.98; Mature: 4.98

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
2.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.8 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MFREVETMNQKKQMIPASDAPAIFELASQYASADLEHYSRTELEMAAAEAGIPAEYIPQA
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IAEIQAQNAKKLIKKQNIRQWMRKWLLISSIAIMGSIGWLIATYNAIANHKIQVEAAWAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHH
VENQRQRRADLIPQLVKVTQAYTTHESTLITTLIEAQQAYLEADSLEQQQDAVEKIDQAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQFQTYALTHSALKSSQLYINLQYEITGTENRLAVERMRYNQAVQSFQQQLQGFPNAVIA
HHHHHHHHHHHHHHCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ELSGFESKPFLQAD
HHCCCCCCCCCCCC
>Mature Secondary Structure
MFREVETMNQKKQMIPASDAPAIFELASQYASADLEHYSRTELEMAAAEAGIPAEYIPQA
CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHH
IAEIQAQNAKKLIKKQNIRQWMRKWLLISSIAIMGSIGWLIATYNAIANHKIQVEAAWAQ
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHH
VENQRQRRADLIPQLVKVTQAYTTHESTLITTLIEAQQAYLEADSLEQQQDAVEKIDQAI
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DQFQTYALTHSALKSSQLYINLQYEITGTENRLAVERMRYNQAVQSFQQQLQGFPNAVIA
HHHHHHHHHHHHHHCCEEEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHCCCHHHHH
ELSGFESKPFLQAD
HHCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 11860552 [H]