| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158338367
Identifier: 158338367
GI number: 158338367
Start: 5332906
End: 5333928
Strand: Reverse
Name: 158338367
Synonym: AM1_5263
Alternate gene names: NA
Gene position: 5333928-5332906 (Counterclockwise)
Preceding gene: 158338368
Following gene: 158338366
Centisome position: 82.01
GC content: 48.68
Gene sequence:
>1023_bases ATGATTACCAAAGACCTAGAGCGGCCTCAGCAGACTCTTGAAACCTTAGAGCGGCCTGCTGATCCACAAGTTCTAGAAGC TCTTTACGAACAACCTGCATCGCAGACTGCATCTATTTTGCCTTTTGCTGCTTTGCTTGCTGCCGTCTGTATTTTGTCGT GTTCAGCAATATTTACCCGGTTAAGTGAAGAAGAGCTAACGGCCAGCGCGACCATTTTTAACCGCTTTTGGATTGCGTCT TTGGCGTTAGGTATGTGGAGCGGCTTCCAACAGTTTCGCCAACCTCCTGCAGAAACCGATCAGACATCCCAATCGATTCA AATTCGTGATTTACTCTGGTTTGGGTGTTTGGGCATCCTGATTTACGGTCGGGCTGGGTCTTGGGCTTGGTCCCTCACCC AAACTAGTGTGGCGAATTCTAATCTCCTCCATAACATGACGCCCTTGTTTGCAACCTTGGGAGGGTGGCTGTTTCTAGGG CATCGCTTTAATCGCCAATTCCTGATGGGGATGAGCTTAGCGATTACTGGAGTGTTAATTATTGGCGTCGGTGATTTCCA GGTCGGTACGAGTGGTCTGGTAGGGGATGGGGCGGCTTTGTTATCTGCCGTTTTCTACGCTGCCAATTTTTTGGTCATTG AAAAACTGCGGACGCGGTTTACCACCACAACCATCATGCTGTCCTCCTGTGTGGTGACTGGGCTGTTGACGATTCCGGTT GTGTTGGTGGGGGGGAATCAGCTATTTCCAACTTCTACAACGGTTTGGCTAGCGGTTATTGCCTTAGGCGTGATTAGCCA AGGATTAGGGCAAGGCCTGCTAGCTTACTGCCTCAAGCAATTTACGTCGGGCTTTGTCTCTGTGTTTATGCTGATGGAAC CCTTAATTACGGCTCTTCTAGCTTGGAAAGTGTTTGGAGAGCAGCTCAACGTATTGAATTGGGTTGCCTTCTTTATCATC TTAACGGGGCTATATTTGGCAACGATCAGCAAAGGTGCGGCAAAATCAAGGCCGATTCATTAA
Upstream 100 bases:
>100_bases AAATTACACAATATATATTTTGTTCAGGGGTCTCGTAACATTACATAATAATGGGGATCATTAACCTCGCGACAGCCCAC TCTTCACCACTGACTCAATA
Downstream 100 bases:
>100_bases TTCCCCCAGTAAATCGATAATATTTAGGTTATGCTTCGGTTAAACCCCTTTCAGGTCAACGGTTCCCCGAAGATTCAATG TTAGAATCGGCCTATGGCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 340; Mature: 340
Protein sequence:
>340_residues MITKDLERPQQTLETLERPADPQVLEALYEQPASQTASILPFAALLAAVCILSCSAIFTRLSEEELTASATIFNRFWIAS LALGMWSGFQQFRQPPAETDQTSQSIQIRDLLWFGCLGILIYGRAGSWAWSLTQTSVANSNLLHNMTPLFATLGGWLFLG HRFNRQFLMGMSLAITGVLIIGVGDFQVGTSGLVGDGAALLSAVFYAANFLVIEKLRTRFTTTTIMLSSCVVTGLLTIPV VLVGGNQLFPTSTTVWLAVIALGVISQGLGQGLLAYCLKQFTSGFVSVFMLMEPLITALLAWKVFGEQLNVLNWVAFFII LTGLYLATISKGAAKSRPIH
Sequences:
>Translated_340_residues MITKDLERPQQTLETLERPADPQVLEALYEQPASQTASILPFAALLAAVCILSCSAIFTRLSEEELTASATIFNRFWIAS LALGMWSGFQQFRQPPAETDQTSQSIQIRDLLWFGCLGILIYGRAGSWAWSLTQTSVANSNLLHNMTPLFATLGGWLFLG HRFNRQFLMGMSLAITGVLIIGVGDFQVGTSGLVGDGAALLSAVFYAANFLVIEKLRTRFTTTTIMLSSCVVTGLLTIPV VLVGGNQLFPTSTTVWLAVIALGVISQGLGQGLLAYCLKQFTSGFVSVFMLMEPLITALLAWKVFGEQLNVLNWVAFFII LTGLYLATISKGAAKSRPIH >Mature_340_residues MITKDLERPQQTLETLERPADPQVLEALYEQPASQTASILPFAALLAAVCILSCSAIFTRLSEEELTASATIFNRFWIAS LALGMWSGFQQFRQPPAETDQTSQSIQIRDLLWFGCLGILIYGRAGSWAWSLTQTSVANSNLLHNMTPLFATLGGWLFLG HRFNRQFLMGMSLAITGVLIIGVGDFQVGTSGLVGDGAALLSAVFYAANFLVIEKLRTRFTTTTIMLSSCVVTGLLTIPV VLVGGNQLFPTSTTVWLAVIALGVISQGLGQGLLAYCLKQFTSGFVSVFMLMEPLITALLAWKVFGEQLNVLNWVAFFII LTGLYLATISKGAAKSRPIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 36955; Mature: 36955
Theoretical pI: Translated: 7.34; Mature: 7.34
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 3.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MITKDLERPQQTLETLERPADPQVLEALYEQPASQTASILPFAALLAAVCILSCSAIFTR CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSEEELTASATIFNRFWIASLALGMWSGFQQFRQPPAETDQTSQSIQIRDLLWFGCLGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH IYGRAGSWAWSLTQTSVANSNLLHNMTPLFATLGGWLFLGHRFNRQFLMGMSLAITGVLI HCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH IGVGDFQVGTSGLVGDGAALLSAVFYAANFLVIEKLRTRFTTTTIMLSSCVVTGLLTIPV EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VLVGGNQLFPTSTTVWLAVIALGVISQGLGQGLLAYCLKQFTSGFVSVFMLMEPLITALL EEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWKVFGEQLNVLNWVAFFIILTGLYLATISKGAAKSRPIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure MITKDLERPQQTLETLERPADPQVLEALYEQPASQTASILPFAALLAAVCILSCSAIFTR CCCCHHHHHHHHHHHHHCCCCHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH LSEEELTASATIFNRFWIASLALGMWSGFQQFRQPPAETDQTSQSIQIRDLLWFGCLGIL HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHHH IYGRAGSWAWSLTQTSVANSNLLHNMTPLFATLGGWLFLGHRFNRQFLMGMSLAITGVLI HCCCCCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHH IGVGDFQVGTSGLVGDGAALLSAVFYAANFLVIEKLRTRFTTTTIMLSSCVVTGLLTIPV EECCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHE VLVGGNQLFPTSTTVWLAVIALGVISQGLGQGLLAYCLKQFTSGFVSVFMLMEPLITALL EEECCCEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AWKVFGEQLNVLNWVAFFIILTGLYLATISKGAAKSRPIH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA