| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
Click here to switch to the map view.
The map label for this gene is 158338355
Identifier: 158338355
GI number: 158338355
Start: 5319968
End: 5321434
Strand: Direct
Name: 158338355
Synonym: AM1_5251
Alternate gene names: NA
Gene position: 5319968-5321434 (Clockwise)
Preceding gene: 158338354
Following gene: 158338359
Centisome position: 81.8
GC content: 46.28
Gene sequence:
>1467_bases ATGAATACTGATCAGAAAGCCCTCTATAAAAGGATTAAAGCCTTTTCAGTCGATCACTCTAATAGTGAATTTCCATTTAG TCAGCGCTTGGCCCAGGAAAATGGTTGGTCGATTGACCAAACTCAACAAGCCATCAGCGAGTACAAAAAGTTCACTTTTT TAGCAGTTGTGGCTGATCATCCCGTTGCCCCTTCTGATCCTGTTGATCAAGTCTGGCATCTACACCTGCTTTACACCCAC TCTTATTGGGATGAGTTTTGCCCCAACATTTTGCAGCAATCCCTCCATCATGGTCCGACCCAAGGAGGGAGAACAGAACA GGCAAAATTTCAGGATTGGTATGCAAAAACCCTTAGCAGCTATGTAACCTTCTTTGGCGAACCTCCCAGCAACATCTGGC CATCCCCTGAAGAGCGATTTAAAACCCACACTGCCTTCGTCCGAGTCGATACCAATTCTTCATGGATTCTGCCAAAACTC TGGTCGACTCTCAACCTGAGTTGGCTTATTCCTTGTGCGATTGTACTGCTGGGGTTAACGGCTTATACGCCTCTGTCGTC CATAAATACGTGGAATCCTCTTAACTTTAATGGCCCTGAGTTTCTTCGCTTTTACCTTGTGGTCATAGCAGTGGGTATCG CCACTGCACTGAGCCTGCGTTTCCATCTGCAACAACCTGAACCCATTGGCTCTGCTTCACCAAAACTTGATATCTATGAG GCCGCATATCTAGCGGAGGGGAGTTATCGAGCTGTTAATACTGCAATTGTAAATCTTGTGCAGCGGGGGCAAGTACAGCT AGACAAGCAGTCTCGATCTTTAGAGTTACTAGCAAACTCCCATGAAAGCAATCATGCTTTGGAACAGGCGATTCAGCAAG CGATTGCAACGGATAACAACATCGAGCATGTTCAAACATCTGTTCTACCGATCGCCATGGAAATTTCTCAAGATCTTGAA GGCCGGGGCATTCTTTTAAATGAGAGACAATCCAAACAGTTTCGACTCTATCCTGCAAGTGTAATCTTTACAGTTCTGTT ACTGGGAGCCGGTAAATGTTTCATTGGGATTGAACGTCATAAACCGATTGGCTACCTTATGCTGTTATGTTTGGCGTTGC TGTATATAGGCTTTATGTTTCTAGCCGAGCGATTCCTTTATCGCAGCCGATTGGGTAACCGTCTTCTCAATGCCTTACGG ACACAATACTCACACTTTAGACGGAATACAAAAGCTGAAGAATCATCCCAAAGCTTACCGGAACATGTAATGGCTTTTGC TTTATTTGGTTCGAGCGTATTGGCTGGAAGTTCGTTGGCAGATATAGGCAAAGTCTTAGTACCTAAACCCAGATTTAGCA ATTCTATTGGAGGCGGTGGCAACTGTGGGGGAGGGTGTGGTAGTGGATGTGGGGGAGGCTGTGGAGGCGGTTGTGGAGGC GGTTGTGGGGGCTGCGGGGGAGGTTAA
Upstream 100 bases:
>100_bases AGGTGTTGTGGGAATCTCAGAATCCTTTTTTAGCTGGTATTAAAGTCATTTCTAGAAGTGTGGGTTAGCCTGGGATTGTA AAATTATTCCGGGAGGGGGT
Downstream 100 bases:
>100_bases GTTTTTAGCTATTCTCCAAACAGCCAGGCAAAAAGACCAAGAACTAGACCCGCCGTTAACAGCTTGGGAATGCTCAGAGC GTGAAAGGCATCAATGGGCC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 488; Mature: 488
Protein sequence:
>488_residues MNTDQKALYKRIKAFSVDHSNSEFPFSQRLAQENGWSIDQTQQAISEYKKFTFLAVVADHPVAPSDPVDQVWHLHLLYTH SYWDEFCPNILQQSLHHGPTQGGRTEQAKFQDWYAKTLSSYVTFFGEPPSNIWPSPEERFKTHTAFVRVDTNSSWILPKL WSTLNLSWLIPCAIVLLGLTAYTPLSSINTWNPLNFNGPEFLRFYLVVIAVGIATALSLRFHLQQPEPIGSASPKLDIYE AAYLAEGSYRAVNTAIVNLVQRGQVQLDKQSRSLELLANSHESNHALEQAIQQAIATDNNIEHVQTSVLPIAMEISQDLE GRGILLNERQSKQFRLYPASVIFTVLLLGAGKCFIGIERHKPIGYLMLLCLALLYIGFMFLAERFLYRSRLGNRLLNALR TQYSHFRRNTKAEESSQSLPEHVMAFALFGSSVLAGSSLADIGKVLVPKPRFSNSIGGGGNCGGGCGSGCGGGCGGGCGG GCGGCGGG
Sequences:
>Translated_488_residues MNTDQKALYKRIKAFSVDHSNSEFPFSQRLAQENGWSIDQTQQAISEYKKFTFLAVVADHPVAPSDPVDQVWHLHLLYTH SYWDEFCPNILQQSLHHGPTQGGRTEQAKFQDWYAKTLSSYVTFFGEPPSNIWPSPEERFKTHTAFVRVDTNSSWILPKL WSTLNLSWLIPCAIVLLGLTAYTPLSSINTWNPLNFNGPEFLRFYLVVIAVGIATALSLRFHLQQPEPIGSASPKLDIYE AAYLAEGSYRAVNTAIVNLVQRGQVQLDKQSRSLELLANSHESNHALEQAIQQAIATDNNIEHVQTSVLPIAMEISQDLE GRGILLNERQSKQFRLYPASVIFTVLLLGAGKCFIGIERHKPIGYLMLLCLALLYIGFMFLAERFLYRSRLGNRLLNALR TQYSHFRRNTKAEESSQSLPEHVMAFALFGSSVLAGSSLADIGKVLVPKPRFSNSIGGGGNCGGGCGSGCGGGCGGGCGG GCGGCGGG >Mature_488_residues MNTDQKALYKRIKAFSVDHSNSEFPFSQRLAQENGWSIDQTQQAISEYKKFTFLAVVADHPVAPSDPVDQVWHLHLLYTH SYWDEFCPNILQQSLHHGPTQGGRTEQAKFQDWYAKTLSSYVTFFGEPPSNIWPSPEERFKTHTAFVRVDTNSSWILPKL WSTLNLSWLIPCAIVLLGLTAYTPLSSINTWNPLNFNGPEFLRFYLVVIAVGIATALSLRFHLQQPEPIGSASPKLDIYE AAYLAEGSYRAVNTAIVNLVQRGQVQLDKQSRSLELLANSHESNHALEQAIQQAIATDNNIEHVQTSVLPIAMEISQDLE GRGILLNERQSKQFRLYPASVIFTVLLLGAGKCFIGIERHKPIGYLMLLCLALLYIGFMFLAERFLYRSRLGNRLLNALR TQYSHFRRNTKAEESSQSLPEHVMAFALFGSSVLAGSSLADIGKVLVPKPRFSNSIGGGGNCGGGCGSGCGGGCGGGCGG GCGGCGGG
Specific function: Unknown
COG id: COG4278
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 53722; Mature: 53722
Theoretical pI: Translated: 7.74; Mature: 7.74
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNTDQKALYKRIKAFSVDHSNSEFPFSQRLAQENGWSIDQTQQAISEYKKFTFLAVVADH CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEECC PVAPSDPVDQVWHLHLLYTHSYWDEFCPNILQQSLHHGPTQGGRTEQAKFQDWYAKTLSS CCCCCCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH YVTFFGEPPSNIWPSPEERFKTHTAFVRVDTNSSWILPKLWSTLNLSWLIPCAIVLLGLT HHHHCCCCCCCCCCCHHHHHHHEEEEEEEECCCCEEHHHHHHHCCHHHHHHHHHHHHHHH AYTPLSSINTWNPLNFNGPEFLRFYLVVIAVGIATALSLRFHLQQPEPIGSASPKLDIYE HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH AAYLAEGSYRAVNTAIVNLVQRGQVQLDKQSRSLELLANSHESNHALEQAIQQAIATDNN HHHHCCCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC IEHVQTSVLPIAMEISQDLEGRGILLNERQSKQFRLYPASVIFTVLLLGAGKCFIGIERH HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEECHHHHHHHHHHHHCCCEEEEEECC KPIGYLMLLCLALLYIGFMFLAERFLYRSRLGNRLLNALRTQYSHFRRNTKAEESSQSLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH EHVMAFALFGSSVLAGSSLADIGKVLVPKPRFSNSIGGGGNCGGGCGSGCGGGCGGGCGG HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GCGGCGGG CCCCCCCC >Mature Secondary Structure MNTDQKALYKRIKAFSVDHSNSEFPFSQRLAQENGWSIDQTQQAISEYKKFTFLAVVADH CCCHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHCCCCHHHHHHHHHHHHHHEEEEEEECC PVAPSDPVDQVWHLHLLYTHSYWDEFCPNILQQSLHHGPTQGGRTEQAKFQDWYAKTLSS CCCCCCCHHHHHHHHHEEHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHH YVTFFGEPPSNIWPSPEERFKTHTAFVRVDTNSSWILPKLWSTLNLSWLIPCAIVLLGLT HHHHCCCCCCCCCCCHHHHHHHEEEEEEEECCCCEEHHHHHHHCCHHHHHHHHHHHHHHH AYTPLSSINTWNPLNFNGPEFLRFYLVVIAVGIATALSLRFHLQQPEPIGSASPKLDIYE HHCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHH AAYLAEGSYRAVNTAIVNLVQRGQVQLDKQSRSLELLANSHESNHALEQAIQQAIATDNN HHHHCCCCCHHHHHHHHHHHHHCCCEECHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCC IEHVQTSVLPIAMEISQDLEGRGILLNERQSKQFRLYPASVIFTVLLLGAGKCFIGIERH HHHHHHHHHHHHHHHHHCCCCCCEEEECCCCCCEEECHHHHHHHHHHHHCCCEEEEEECC KPIGYLMLLCLALLYIGFMFLAERFLYRSRLGNRLLNALRTQYSHFRRNTKAEESSQSLP CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHH EHVMAFALFGSSVLAGSSLADIGKVLVPKPRFSNSIGGGGNCGGGCGSGCGGGCGGGCGG HHHHHHHHHHHHHHCCCCHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC GCGGCGGG CCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA