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The map label for this gene is 158338354

Identifier: 158338354

GI number: 158338354

Start: 5318330

End: 5319781

Strand: Direct

Name: 158338354

Synonym: AM1_5250

Alternate gene names: NA

Gene position: 5318330-5319781 (Clockwise)

Preceding gene: 158338347

Following gene: 158338355

Centisome position: 81.77

GC content: 36.43

Gene sequence:

>1452_bases
ATGAGCTATGTTCCTAGACTACTCTACAGAACACCATCAGCATTTTTACTTGGATTGATTGCATGCAACATCGTTGCTAT
TGAACCAGCAACAGCTGAACCCCTTTTATCGCAATCAATTCTTTCAGGAGAACAAAATTCAAATGCTAATTACCTTTTTC
AGCAAGGTATTAAGCAGTTTGAAGTTCGCCAATACCAAGCTGCCTTAGAATCATGGTTAAAAGCACTAAAAATTTACCAA
GCTCTCAAGAGTGATGACGGTGAACTAAAGACTCGGAACAATCTAGGGCTTACCTACTCTAATTTAGGCCAGCACAACAA
GGCTATTGAGTTCTATGGACAGTCACTAGCAATTGCACAAAAAATTGGAGACCATAATTCTGAAGCTAATTTACTCAACA
ATTTGGGTTTAGCTTATTACTCACAAAAGCAATATCTCAAGGCCATTAGCTATCACAAGAAATCATTAATCACTGCCAAT
CAAGGTAGTATTGAAAATATTAAAGCTGACATATTAAATAACCTGGGCAATGCTTCATATGCAAATCAAGGATATAGAGA
AGCTTTTAGGTATTATCTCAAATCTTTAGAACTCCAGAAAAAGACCGGTAATCGTGAGGCTGAAGCAAAAGCCCTTAACA
ATCTAGGAAATTCAGCATATGCATTGGGTGAGTATCAGAAATCGATAGATTTTTATGAAAAATTTATTGCTATTAGAAAT
AGTGCGAAGCAAGACACAACCCTATTTTCTAACTTAGGAAATGCTTATACTTCAGTCGGTCAATACTCTAAAGCAATTGA
ACAGTACCAGCAACTGTTAGCACTCATTGGCAAGACAGATAATGAAGCTAAGGCTAAAGTTTTAAACGACATCGGCAATG
TCTTTTTTTCGTTAGGCGAATTCGAAAAATCAACGGCATACTATCAAAAGCTTTTAGAAGTTACACGTAAACTCGGTAAC
AAAGAAAGTGAAGCAAAGGCTTTCAATAATCTGGGGCTTGCATCATATTCTCTGGAAAAATACCAAAAAGCTTTGGAATA
CTATCAACAAGCTTTGGCTATCACTCGCCAACTTAGCAATACAAAAAGTGAAGTAAAAACTCTCAATAATCTGGGGCTTG
TGTCATATTCTTTAAAAAAATACCCAAAGGCAATTGAATATTACTTACAGTCCTTGACCATTGCTCGTCAAACGGGTGAA
CAAGCAATCGAGGTAAATTCTTTGCATAATTTAGGCAATGCTACCTATGCATTAGGTCAATATGCAAAAGCACTTGAATA
CTATCAGCAGTCCTTATCAGTTGCTCGGCAGCTTGGCGATTATAAAGTTGAAGTTTCTTCATTGAACAGCTTGGGTAACA
CGTATGATTCTCTTGGTCAGTATCAAAAAGCTATTGAATTCTATCGCCAAGCTTCAGAATTAAAACAGACAAAATTAGGA
GAAAAACAATAG

Upstream 100 bases:

>100_bases
CTACCGAAGATCCTTTATCCAGTTAAGGTCAACCAGACTCACCTAATAGTAAAGATAAATTAGAAGAATAAAATACAATT
GCTTTAGGAGAACAGTAGAA

Downstream 100 bases:

>100_bases
ACACTTGTTTCGATATGCTTATTGTTTGTAGTTCGATTCGGTCATAAACATCAATCTAATACTGTGAACGTAAAACTATC
CAATTAAGGTGTTGTGGGAA

Product: TPR domain-containing protein

Products: NA

Alternate protein names: Tetratricopeptide Repeat Domain Protein; Tetratricopeptide Repeat Family; Tetratricopeptide TPR_2 Repeat Protein; TPR Domain-Containing Protein; NB-ARC Domain-Containing Protein; Tetratricopeptide Repeat-Containing Protein; SARP Family Transcriptional Regulator; Diguanylate Cyclase/Serine/Threonine Protein Kinase; Peptidase; Tetratricopeptide Protein; TPR Repeat Protein; Histidine Kinase; Tetratricopeptide Repeat Family Protein; Transcriptional Regulator SARP Family; Kinesin Light Chain; Tetratricopeptide Domain-Containing Protein; WD-40 Repeat-Containing Protein; Transcriptional Regulator XRE Family; Signal Transduction Histidine Kinase Lyts; LOW QUALITY PROTEIN Regulatory Protein AfsR; SLEI Family; TPR Domain Family Protein; NB-ARC Domain Protein; Transcriptional Regulator; SEC-C Motif Domain Protein; Tetratricopeptide TPR2 Protein; TPR Domain Protein; Peptidase S1 And S6 Chymotrypsin/Hap; Diguanylate Cyclase; Tetratricopeptide Repeat Domain-Containing Protein; LOW QUALITY PROTEIN Tetratricopeptide Repeat Protein; Helix-Turn-Helix Domain Protein; XRE Family Transcriptional Regulator With TPR Repeat Domain; TPR Repeat-Containing Adenylate/Guanylate Cyclase; Signal Transduction Protein; Peptidase Domain-Containing Protein; Two-Component System Response Regulator; Nb-Arc; O-Linked GlcNAc Transferase; Regulatory Protein AfsR; Peptidase-Like; Fis Family Transcriptional Regulator; Beta-Lactamase Domain-Containing Protein

Number of amino acids: Translated: 483; Mature: 482

Protein sequence:

>483_residues
MSYVPRLLYRTPSAFLLGLIACNIVAIEPATAEPLLSQSILSGEQNSNANYLFQQGIKQFEVRQYQAALESWLKALKIYQ
ALKSDDGELKTRNNLGLTYSNLGQHNKAIEFYGQSLAIAQKIGDHNSEANLLNNLGLAYYSQKQYLKAISYHKKSLITAN
QGSIENIKADILNNLGNASYANQGYREAFRYYLKSLELQKKTGNREAEAKALNNLGNSAYALGEYQKSIDFYEKFIAIRN
SAKQDTTLFSNLGNAYTSVGQYSKAIEQYQQLLALIGKTDNEAKAKVLNDIGNVFFSLGEFEKSTAYYQKLLEVTRKLGN
KESEAKAFNNLGLASYSLEKYQKALEYYQQALAITRQLSNTKSEVKTLNNLGLVSYSLKKYPKAIEYYLQSLTIARQTGE
QAIEVNSLHNLGNATYALGQYAKALEYYQQSLSVARQLGDYKVEVSSLNSLGNTYDSLGQYQKAIEFYRQASELKQTKLG
EKQ

Sequences:

>Translated_483_residues
MSYVPRLLYRTPSAFLLGLIACNIVAIEPATAEPLLSQSILSGEQNSNANYLFQQGIKQFEVRQYQAALESWLKALKIYQ
ALKSDDGELKTRNNLGLTYSNLGQHNKAIEFYGQSLAIAQKIGDHNSEANLLNNLGLAYYSQKQYLKAISYHKKSLITAN
QGSIENIKADILNNLGNASYANQGYREAFRYYLKSLELQKKTGNREAEAKALNNLGNSAYALGEYQKSIDFYEKFIAIRN
SAKQDTTLFSNLGNAYTSVGQYSKAIEQYQQLLALIGKTDNEAKAKVLNDIGNVFFSLGEFEKSTAYYQKLLEVTRKLGN
KESEAKAFNNLGLASYSLEKYQKALEYYQQALAITRQLSNTKSEVKTLNNLGLVSYSLKKYPKAIEYYLQSLTIARQTGE
QAIEVNSLHNLGNATYALGQYAKALEYYQQSLSVARQLGDYKVEVSSLNSLGNTYDSLGQYQKAIEFYRQASELKQTKLG
EKQ
>Mature_482_residues
SYVPRLLYRTPSAFLLGLIACNIVAIEPATAEPLLSQSILSGEQNSNANYLFQQGIKQFEVRQYQAALESWLKALKIYQA
LKSDDGELKTRNNLGLTYSNLGQHNKAIEFYGQSLAIAQKIGDHNSEANLLNNLGLAYYSQKQYLKAISYHKKSLITANQ
GSIENIKADILNNLGNASYANQGYREAFRYYLKSLELQKKTGNREAEAKALNNLGNSAYALGEYQKSIDFYEKFIAIRNS
AKQDTTLFSNLGNAYTSVGQYSKAIEQYQQLLALIGKTDNEAKAKVLNDIGNVFFSLGEFEKSTAYYQKLLEVTRKLGNK
ESEAKAFNNLGLASYSLEKYQKALEYYQQALAITRQLSNTKSEVKTLNNLGLVSYSLKKYPKAIEYYLQSLTIARQTGEQ
AIEVNSLHNLGNATYALGQYAKALEYYQQSLSVARQLGDYKVEVSSLNSLGNTYDSLGQYQKAIEFYRQASELKQTKLGE
KQ

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Homo sapiens, GI224028289, Length=405, Percent_Identity=29.1358024691358, Blast_Score=167, Evalue=2e-41,
Organism=Homo sapiens, GI164519122, Length=313, Percent_Identity=28.7539936102236, Blast_Score=133, Evalue=3e-31,
Organism=Homo sapiens, GI224548925, Length=318, Percent_Identity=27.6729559748428, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI224548927, Length=317, Percent_Identity=29.0220820189274, Blast_Score=129, Evalue=4e-30,
Organism=Homo sapiens, GI282165719, Length=357, Percent_Identity=24.6498599439776, Blast_Score=78, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI25147165, Length=336, Percent_Identity=24.702380952381, Blast_Score=83, Evalue=3e-16,
Organism=Caenorhabditis elegans, GI25147167, Length=339, Percent_Identity=23.8938053097345, Blast_Score=82, Evalue=5e-16,
Organism=Drosophila melanogaster, GI24660950, Length=472, Percent_Identity=24.7881355932203, Blast_Score=144, Evalue=1e-34,
Organism=Drosophila melanogaster, GI24650658, Length=279, Percent_Identity=30.8243727598566, Blast_Score=134, Evalue=1e-31,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 54226; Mature: 54095

Theoretical pI: Translated: 9.47; Mature: 9.47

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50005 TPR L=RR ; PS50293 TPR_REGION

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.2 %Cys     (Translated Protein)
0.2 %Met     (Translated Protein)
0.4 %Cys+Met (Translated Protein)
0.2 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSYVPRLLYRTPSAFLLGLIACNIVAIEPATAEPLLSQSILSGEQNSNANYLFQQGIKQF
CCCHHHHHHHCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH
EVRQYQAALESWLKALKIYQALKSDDGELKTRNNLGLTYSNLGQHNKAIEFYGQSLAIAQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHCCCCHHHHHHHHHHHHHH
KIGDHNSEANLLNNLGLAYYSQKQYLKAISYHKKSLITANQGSIENIKADILNNLGNASY
HHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCC
ANQGYREAFRYYLKSLELQKKTGNREAEAKALNNLGNSAYALGEYQKSIDFYEKFIAIRN
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
SAKQDTTLFSNLGNAYTSVGQYSKAIEQYQQLLALIGKTDNEAKAKVLNDIGNVFFSLGE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FEKSTAYYQKLLEVTRKLGNKESEAKAFNNLGLASYSLEKYQKALEYYQQALAITRQLSN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKSEVKTLNNLGLVSYSLKKYPKAIEYYLQSLTIARQTGEQAIEVNSLHNLGNATYALGQ
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHH
YAKALEYYQQSLSVARQLGDYKVEVSSLNSLGNTYDSLGQYQKAIEFYRQASELKQTKLG
HHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
EKQ
CCC
>Mature Secondary Structure 
SYVPRLLYRTPSAFLLGLIACNIVAIEPATAEPLLSQSILSGEQNSNANYLFQQGIKQF
CCHHHHHHHCHHHHHHHHHHHHHHEECCCCCCHHHHHHHHCCCCCCCCHHHHHHHHHHH
EVRQYQAALESWLKALKIYQALKSDDGELKTRNNLGLTYSNLGQHNKAIEFYGQSLAIAQ
HHHHHHHHHHHHHHHHHHHHHHHCCCCCCEECCCCCCCHHHHCCCCHHHHHHHHHHHHHH
KIGDHNSEANLLNNLGLAYYSQKQYLKAISYHKKSLITANQGSIENIKADILNNLGNASY
HHCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHEECCCCCHHHHHHHHHHHCCCCCC
ANQGYREAFRYYLKSLELQKKTGNREAEAKALNNLGNSAYALGEYQKSIDFYEKFIAIRN
CCHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHC
SAKQDTTLFSNLGNAYTSVGQYSKAIEQYQQLLALIGKTDNEAKAKVLNDIGNVFFSLGE
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
FEKSTAYYQKLLEVTRKLGNKESEAKAFNNLGLASYSLEKYQKALEYYQQALAITRQLSN
HHHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH
TKSEVKTLNNLGLVSYSLKKYPKAIEYYLQSLTIARQTGEQAIEVNSLHNLGNATYALGQ
HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHCCHHHHHHHH
YAKALEYYQQSLSVARQLGDYKVEVSSLNSLGNTYDSLGQYQKAIEFYRQASELKQTKLG
HHHHHHHHHHHHHHHHHHCCCEEEHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHCCC
EKQ
CCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA