Click here to switch to the map view.

The map label for this gene is fraH [H]

Identifier: 158338296

GI number: 158338296

Start: 5255941

End: 5256891

Strand: Direct

Name: fraH [H]

Synonym: AM1_5192

Alternate gene names: 158338296

Gene position: 5255941-5256891 (Clockwise)

Preceding gene: 158338286

Following gene: 158338297

Centisome position: 80.81

GC content: 47.32

Gene sequence:

>951_bases
ATGAACCGGCTCTGCCCCTATTGTTTTTATCAAAATGAGCCTGGACAGCAGAGTACCTGTGCTCAATGTCAGCGAGACTT
AACTGACATCCCTTGCTGTCAAAATTGTGGCGCGACCCAACTTGAATTTGCGCGATATTGCTATCATTGCGGCCTGAGGC
TTTTGCCTGCAAGTCTCATTGCCAAGAATAGTTTTACCTATCTTAAGAACCCCTATCCGGGGCTAAAAGCAGTGAATCTA
GGCCCTGAAAGCGAGTTCGTTGAACAATTGGATCCTCATGCAACCCAGTTTCAGCAAGAGTCTCTTCGCCTCCTGCATGT
TCAATCCGGAACCCTATTGGCCTTGCCAGCTCAGATCAATCCTATTTTGATTGGGAAGGCTGGGGCAGGGCGTTATCCTC
ATATTGACGTACTTGATTTTCCAAATTCTGAGGTGGTCTCGCGGCAACAGGCATGTTTACATATGGTGCGGGACCAATGT
GCGATCGCAGATTTAGACAGCACTAACGGCACCTATGTTAATGAGGTGCCGTTGCCCACCGGTCACCAACACCCCCTACA
GTTTGGCGATCGGATCAACTTTGGCCCCTCTGATAAATTCACTTTGCTGTTTATTCGGGAGTTACCCATCAACTTGAAAC
ATCTTCAAACGGTTTCAGGTGGAGATGGAGAATTTGAGCATGAAATTTTAGAAACCTATGGGCAACGGGCTCAGCAAAGC
CTAGAGCAAATGAAAGCGGCCTACGCAGAACAGGATCAAGAACGGTTGGTCTCCACAGCTGAAGACTTAACCCTTGCTAG
CCATAACGTTGGCGCTCAAGTGGTTCATTTACTCGCTTCTCAATTTCAAACGGCCCCTCAAGGCAATGCTGCCCATTTTC
ATCGTCAACTCTTGAAGGTGATTGAAGAGGCACTCCAGAAAGTGAGATTCTTTACTAAGGTTTACTATTAG

Upstream 100 bases:

>100_bases
GTGGCAGCAACAACCTTGAATTGAACCCACCAGACTGCTGTGCTACCTGCCTTTATGGAAAAATGCTATTGTGTCGCTGT
CCCCCGTTGATGCAAGGGTC

Downstream 100 bases:

>100_bases
CCTGCCTTTTAAACACTCGATATTCGCCCCATCCATCCCTATGCTCAATGTTGATTCCCAACCCGCCCTCCTGGTTCTAG
CTGATGGCAGTTCCTATCGC

Product: FHA domain-containing protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 316; Mature: 316

Protein sequence:

>316_residues
MNRLCPYCFYQNEPGQQSTCAQCQRDLTDIPCCQNCGATQLEFARYCYHCGLRLLPASLIAKNSFTYLKNPYPGLKAVNL
GPESEFVEQLDPHATQFQQESLRLLHVQSGTLLALPAQINPILIGKAGAGRYPHIDVLDFPNSEVVSRQQACLHMVRDQC
AIADLDSTNGTYVNEVPLPTGHQHPLQFGDRINFGPSDKFTLLFIRELPINLKHLQTVSGGDGEFEHEILETYGQRAQQS
LEQMKAAYAEQDQERLVSTAEDLTLASHNVGAQVVHLLASQFQTAPQGNAAHFHRQLLKVIEEALQKVRFFTKVYY

Sequences:

>Translated_316_residues
MNRLCPYCFYQNEPGQQSTCAQCQRDLTDIPCCQNCGATQLEFARYCYHCGLRLLPASLIAKNSFTYLKNPYPGLKAVNL
GPESEFVEQLDPHATQFQQESLRLLHVQSGTLLALPAQINPILIGKAGAGRYPHIDVLDFPNSEVVSRQQACLHMVRDQC
AIADLDSTNGTYVNEVPLPTGHQHPLQFGDRINFGPSDKFTLLFIRELPINLKHLQTVSGGDGEFEHEILETYGQRAQQS
LEQMKAAYAEQDQERLVSTAEDLTLASHNVGAQVVHLLASQFQTAPQGNAAHFHRQLLKVIEEALQKVRFFTKVYY
>Mature_316_residues
MNRLCPYCFYQNEPGQQSTCAQCQRDLTDIPCCQNCGATQLEFARYCYHCGLRLLPASLIAKNSFTYLKNPYPGLKAVNL
GPESEFVEQLDPHATQFQQESLRLLHVQSGTLLALPAQINPILIGKAGAGRYPHIDVLDFPNSEVVSRQQACLHMVRDQC
AIADLDSTNGTYVNEVPLPTGHQHPLQFGDRINFGPSDKFTLLFIRELPINLKHLQTVSGGDGEFEHEILETYGQRAQQS
LEQMKAAYAEQDQERLVSTAEDLTLASHNVGAQVVHLLASQFQTAPQGNAAHFHRQLLKVIEEALQKVRFFTKVYY

Specific function: Putative heterocyst to vegetative cell connection [H]

COG id: COG1716

COG function: function code T; FOG: FHA domain

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FHA domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000253
- InterPro:   IPR008984 [H]

Pfam domain/function: PF00498 FHA [H]

EC number: NA

Molecular weight: Translated: 35430; Mature: 35430

Theoretical pI: Translated: 6.31; Mature: 6.31

Prosite motif: PS50006 FHA_DOMAIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.5 %Cys     (Translated Protein)
0.9 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
3.5 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNRLCPYCFYQNEPGQQSTCAQCQRDLTDIPCCQNCGATQLEFARYCYHCGLRLLPASLI
CCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
AKNSFTYLKNPYPGLKAVNLGPESEFVEQLDPHATQFQQESLRLLHVQSGTLLALPAQIN
HCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCHHHHHHHHCEEEEEECCCCEEEECCCCC
PILIGKAGAGRYPHIDVLDFPNSEVVSRQQACLHMVRDQCAIADLDSTNGTYVNEVPLPT
EEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCC
GHQHPLQFGDRINFGPSDKFTLLFIRELPINLKHLQTVSGGDGEFEHEILETYGQRAQQS
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHH
LEQMKAAYAEQDQERLVSTAEDLTLASHNVGAQVVHLLASQFQTAPQGNAAHFHRQLLKV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IEEALQKVRFFTKVYY
HHHHHHHHHHHHHHCC
>Mature Secondary Structure
MNRLCPYCFYQNEPGQQSTCAQCQRDLTDIPCCQNCGATQLEFARYCYHCGLRLLPASLI
CCCCCCCEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCCHHHHHHHHH
AKNSFTYLKNPYPGLKAVNLGPESEFVEQLDPHATQFQQESLRLLHVQSGTLLALPAQIN
HCCCCCCCCCCCCCCEEECCCCHHHHHHHHCCHHHHHHHHCEEEEEECCCCEEEECCCCC
PILIGKAGAGRYPHIDVLDFPNSEVVSRQQACLHMVRDQCAIADLDSTNGTYVNEVPLPT
EEEEECCCCCCCCEEEEEECCCHHHHHHHHHHHHHHHHHHHEEECCCCCCCEEEECCCCC
GHQHPLQFGDRINFGPSDKFTLLFIRELPINLKHLQTVSGGDGEFEHEILETYGQRAQQS
CCCCCCCCCCCCCCCCCCCEEEEEEECCCCCHHHHEECCCCCCHHHHHHHHHHHHHHHHH
LEQMKAAYAEQDQERLVSTAEDLTLASHNVGAQVVHLLASQFQTAPQGNAAHFHRQLLKV
HHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
IEEALQKVRFFTKVYY
HHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11759840 [H]