| Definition | Acaryochloris marina MBIC11017 chromosome, complete genome. |
|---|---|
| Accession | NC_009925 |
| Length | 6,503,724 |
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The map label for this gene is 158338295
Identifier: 158338295
GI number: 158338295
Start: 5255256
End: 5255648
Strand: Reverse
Name: 158338295
Synonym: AM1_5191
Alternate gene names: NA
Gene position: 5255648-5255256 (Counterclockwise)
Preceding gene: 158338299
Following gene: 158338294
Centisome position: 80.81
GC content: 47.84
Gene sequence:
>393_bases ATGAATGCGGCTGAGCAAGTCACAAACCCTGAATCGGCCACTAAAATAGCTGCCATTGTTAACTTATTTAAGCGGCAGTT CCCTGATGTCAAAGCCAATCTGAAGCCTTGGACCAATGACCCCGATACCTTGGAATGGGTGGATCCCTATTCCATCGATA TGGGATTTAATTTGCCTGCAGGACATACCCTGGTTCAACTGCGAATGCATGACAACCGCTTGATTGGCATTGAAGCCTCC TGTTTTGGTCCGTTTGGCAGCCAACGATGGCGGTTCTCAACCATTGGCGATTGGACCTTCCTCGGTAACACCCCTCCTCC TGCAGGATTTCAAGCGAAGCTCAAGCAAACCTTTCATGAAATTTTTCAGCTATATAACGCTGTTTCCGAGTAG
Upstream 100 bases:
>100_bases ATATTGAGAGTCCCGTTAAAGTATTGTAAAGACGTTAAGCCAATCTCAATCGGCTTAACCCTGCCCAGTAGGATTCAGAT CATTTCAAGGAGCGGTCCAG
Downstream 100 bases:
>100_bases ATCGATATAGACTCAATATCGTTCCGTTCTCAGGGTTTTTGCTCTTCTCTTCAATTCAGTCCTCTGCCAGTAAGAGACCC CATGTCCCTCCGCAAATTGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 130; Mature: 130
Protein sequence:
>130_residues MNAAEQVTNPESATKIAAIVNLFKRQFPDVKANLKPWTNDPDTLEWVDPYSIDMGFNLPAGHTLVQLRMHDNRLIGIEAS CFGPFGSQRWRFSTIGDWTFLGNTPPPAGFQAKLKQTFHEIFQLYNAVSE
Sequences:
>Translated_130_residues MNAAEQVTNPESATKIAAIVNLFKRQFPDVKANLKPWTNDPDTLEWVDPYSIDMGFNLPAGHTLVQLRMHDNRLIGIEAS CFGPFGSQRWRFSTIGDWTFLGNTPPPAGFQAKLKQTFHEIFQLYNAVSE >Mature_130_residues MNAAEQVTNPESATKIAAIVNLFKRQFPDVKANLKPWTNDPDTLEWVDPYSIDMGFNLPAGHTLVQLRMHDNRLIGIEAS CFGPFGSQRWRFSTIGDWTFLGNTPPPAGFQAKLKQTFHEIFQLYNAVSE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14684; Mature: 14684
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNAAEQVTNPESATKIAAIVNLFKRQFPDVKANLKPWTNDPDTLEWVDPYSIDMGFNLPA CCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCC GHTLVQLRMHDNRLIGIEASCFGPFGSQRWRFSTIGDWTFLGNTPPPAGFQAKLKQTFHE CCEEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHH IFQLYNAVSE HHHHHHHHCC >Mature Secondary Structure MNAAEQVTNPESATKIAAIVNLFKRQFPDVKANLKPWTNDPDTLEWVDPYSIDMGFNLPA CCCHHHCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCEEECCCEEEECCCCCCC GHTLVQLRMHDNRLIGIEASCFGPFGSQRWRFSTIGDWTFLGNTPPPAGFQAKLKQTFHE CCEEEEEEECCCEEEEEECCCCCCCCCCCEEEEECCCEEEECCCCCCCCHHHHHHHHHHH IFQLYNAVSE HHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA