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The map label for this gene is ydjX [C]

Identifier: 158338193

GI number: 158338193

Start: 5139517

End: 5140197

Strand: Direct

Name: ydjX [C]

Synonym: AM1_5086

Alternate gene names: 158338193

Gene position: 5139517-5140197 (Clockwise)

Preceding gene: 158338192

Following gene: 158338199

Centisome position: 79.02

GC content: 51.4

Gene sequence:

>681_bases
ATGCTGCAAGAAGGACTACGCCATCGGCAAGTGAAAGGTCGCAGACGATTACTAGCAGGATTGGTAGGGGTGTTGTTGCT
TCCCTTCGCCATCCGGTATGTTCCCTTGCTGTTTGACCAGATGCATTTGGTGGAGTTTGTTCAATCCCATGGTTTATGGG
GGGCGATCATCTTTATCCTGCTGCATATTGTCGCCACGGTGTTGGGGGTCCCTGGAGTCATTTTGACCATCGTGGGAGGT
GTCTTGTTTGGCCTGCTGTGGGGGAGCTTTTTATCCCTAGCAGGAGCCACCTTGGGAGCCATGGGAGCCTTCTGGATGGC
CCGTTACCTATTGTTAGATTGGGCCCAGAGACGTGTGCGAGATCGCAAGCTGCTCTGTACGTTTAACCAAGCCGTGCTCC
AGCATCCATTCAGCTTTGTCCTGATTGTTCGCTTTGCGCCTATTTCTCCCTTTAATTTAGTGAATTTCCTGTTTGGCATG
ACCACCATTCATTGGTTTCCCTACAGTTTAGGAACGCTGATTGGAATTATTCCTGGGGTGATTGCCTATACCTGGATCGG
GGTTGCCGGGAATGATGCCATGCATGGTAAAGGCCCTTGGCCCTTGGTGATTGCCTGTACCTGCCTAGCGGTGCTGTCGG
CAATGCCTTTGTTACTGCGTAAGAAGCGATCGCTGACTTAA

Upstream 100 bases:

>100_bases
CCACGGTTCTTGTGACCGTCTATGTGACGAAAGTGGCCCGCAAAGCCTTGGCAGAAGCAGTCCCTGAAACTGGTACTGCG
GTTGAGCAAGAGCTAAGTTA

Downstream 100 bases:

>100_bases
GCCCTTTTTAGGTTCGCGGCCCCTAAACCAGAAGCTGCCACAGAATCACAAATAGAGACAAGATAGACCCGACAAATCCC
AACGACCGCAAAACTGGTAC

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 226; Mature: 226

Protein sequence:

>226_residues
MLQEGLRHRQVKGRRRLLAGLVGVLLLPFAIRYVPLLFDQMHLVEFVQSHGLWGAIIFILLHIVATVLGVPGVILTIVGG
VLFGLLWGSFLSLAGATLGAMGAFWMARYLLLDWAQRRVRDRKLLCTFNQAVLQHPFSFVLIVRFAPISPFNLVNFLFGM
TTIHWFPYSLGTLIGIIPGVIAYTWIGVAGNDAMHGKGPWPLVIACTCLAVLSAMPLLLRKKRSLT

Sequences:

>Translated_226_residues
MLQEGLRHRQVKGRRRLLAGLVGVLLLPFAIRYVPLLFDQMHLVEFVQSHGLWGAIIFILLHIVATVLGVPGVILTIVGG
VLFGLLWGSFLSLAGATLGAMGAFWMARYLLLDWAQRRVRDRKLLCTFNQAVLQHPFSFVLIVRFAPISPFNLVNFLFGM
TTIHWFPYSLGTLIGIIPGVIAYTWIGVAGNDAMHGKGPWPLVIACTCLAVLSAMPLLLRKKRSLT
>Mature_226_residues
MLQEGLRHRQVKGRRRLLAGLVGVLLLPFAIRYVPLLFDQMHLVEFVQSHGLWGAIIFILLHIVATVLGVPGVILTIVGG
VLFGLLWGSFLSLAGATLGAMGAFWMARYLLLDWAQRRVRDRKLLCTFNQAVLQHPFSFVLIVRFAPISPFNLVNFLFGM
TTIHWFPYSLGTLIGIIPGVIAYTWIGVAGNDAMHGKGPWPLVIACTCLAVLSAMPLLLRKKRSLT

Specific function: Unknown

COG id: COG0398

COG function: function code S; Uncharacterized conserved protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the TVP38/TMEM64 family [H]

Homologues:

Organism=Escherichia coli, GI87081964, Length=149, Percent_Identity=36.241610738255, Blast_Score=102, Evalue=3e-23,
Organism=Escherichia coli, GI1788049, Length=150, Percent_Identity=26.6666666666667, Blast_Score=69, Evalue=3e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR015414 [H]

Pfam domain/function: PF09335 SNARE_assoc [H]

EC number: NA

Molecular weight: Translated: 25056; Mature: 25056

Theoretical pI: Translated: 11.44; Mature: 11.44

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.1 %Met     (Translated Protein)
4.4 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.1 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MLQEGLRHRQVKGRRRLLAGLVGVLLLPFAIRYVPLLFDQMHLVEFVQSHGLWGAIIFIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LHIVATVLGVPGVILTIVGGVLFGLLWGSFLSLAGATLGAMGAFWMARYLLLDWAQRRVR
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRKLLCTFNQAVLQHPFSFVLIVRFAPISPFNLVNFLFGMTTIHWFPYSLGTLIGIIPGV
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAYTWIGVAGNDAMHGKGPWPLVIACTCLAVLSAMPLLLRKKRSLT
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MLQEGLRHRQVKGRRRLLAGLVGVLLLPFAIRYVPLLFDQMHLVEFVQSHGLWGAIIFIL
CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHH
LHIVATVLGVPGVILTIVGGVLFGLLWGSFLSLAGATLGAMGAFWMARYLLLDWAQRRVR
HHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
DRKLLCTFNQAVLQHPFSFVLIVRFAPISPFNLVNFLFGMTTIHWFPYSLGTLIGIIPGV
HHHHHHHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
IAYTWIGVAGNDAMHGKGPWPLVIACTCLAVLSAMPLLLRKKRSLT
HHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 8590279; 8905231 [H]